Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31sc179G40 | sc-179 | + | View | |
Acer truncatum | Atru.chr11.1298 | chr11 | - | View | |
Actinidia chinensis | Actinidia16637 | Lachesis_group4 | - | View | |
Arabidopsis lyrata | AL2G27500 | scaffold_2 | - | View | |
Avicennia marina | MSTRG.823 | ScioBoG_102831_HRSCAF_103044 | + | View | |
Aquilegia oxysepala | Aqoxy3G00334 | CHR03 | - | View | |
Arabidopsis thaliana | AT1G68590 | Ribosomal protein PSRP-3/Ycf65 Ribosomal protein PSRP-3/Ycf65%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT5G15760.1)%3B Has 390 Blast hits to 390 proteins in 107 species: Archae - 0%3B Bacteria - 131%3B Metazoa - 0%3B Fungi - 0%3B Plants - 76%3B Viruses - 0%3B Other Eukaryotes - 183 (source: NCBI BLink). | Chr1 | - | View |
Brassica carinata | BcaC08g45951 | ChrC08 | + | View | |
Brassica carinata | BcaC03g14972 | ChrC03 | - | View | |
Brassica carinata | BcaC08g46310 | ChrC08 | - | View | |
Brassica carinata | BcaB03g15836 | ChrB03 | + | View | |
Brassica napus | C06p37480 | C06 | + | View | |
Brassica napus | A07p31910 | A07 | + | View | |
Brassica napus | A07p35030 | A07 | - | View | |
Brassica oleracea | BolC6t38850H | C6 | + | View | |
Brassica oleracea | BolC6t39301H | C6 | - | View | |
Brassica rapa | BraA07t30819Z | A07 | + | View | |
Beta vulgaris | EL10Ac2g04587 | K19032 - 30S ribosomal protein 3 (PSRP3) | Chr2_EL10_PGA_scaffold6 | - | View |
Coffea canephora | Cc11_g10360 | 30S ribosomal protein 3, chloroplastic | chr11 | - | View |
Citrus clementina | Ciclev10032902m.g | scaffold_4 | - | View | |
Citrus clementina | Ciclev10012871m.g | scaffold_6 | - | View | |
Cardamine hirsuta | CARHR061390 | 30S ribosomal protein 3-1 | Chr2 | - | View |
Corchorus olitorius | COL.COLO4_07898 | Ribosomal protein PSRP-3/Ycf65 | AWUE01013496.1 | + | View |
Carica papaya | Cpa.g.sc1.192 | supercontig_1 | - | View | |
Capsella rubella | Carub.0002s1513 | K19032 - 30S ribosomal protein 3 (PSRP3) | scaffold_2 | - | View |
Daucus carota | DCAR_026724 | hypothetical protein | DCARv2_Chr8 | - | View |
Daucus carota | DCAR_017204 | hypothetical protein | DCARv2_Chr5 | - | View |
Davidia involucrata | Dinv21111 | GWHABJS00000018 | + | View | |
Durio zibethinus | Duzib248G1227 | NW_019168048.1 | + | View | |
Erigeron canadensis | ECA233G1351 | Conyza_canadensis_scaffold:1 | + | View | |
Erythranthe guttata | Migut.E00323 | scaffold_5 | + | View | |
Eutrema salsugineum | Thhalv10019225m.g | K19032 - 30S ribosomal protein 3 (PSRP3) | scaffold_9 | + | View |
Gossypium hirsutum | Gohir.D02G115700 | K19032 - 30S ribosomal protein 3 (PSRP3) | D02 | - | View |
Gossypium hirsutum | Gohir.A03G097501 | K19032 - 30S ribosomal protein 3 (PSRP3) | A03 | - | View |
Gossypium raimondii | Gorai.005G138300 | Chr05 | + | View | |
Helianthus annuus | HanXRQChr08g0214241 | Putative ribosomal protein PSRP-3/Ycf65 | HanXRQChr08 | - | View |
Lonicera japonica | Lj3P1017T47 | GWHAAZE00000003 | - | View | |
Manihot esculenta | Manes.06G070400 | Chromosome06 | - | View | |
Manihot esculenta | Manes.14G099900 | Chromosome14 | + | View | |
Nelumbo nucifera | Nn4g23801 | chr4 | + | View | |
Nelumbo nucifera | Nn3g17798 | chr3 | + | View | |
Nicotiana tabacum | Nitab4.5_0004895g0090 | Ribosomal protein PSRP-3/Ycf65 | Nitab4.5_0004895 | - | View |
Nicotiana tabacum | Nitab4.5_0003823g0030 | Ribosomal protein PSRP-3/Ycf65 | Nitab4.5_0003823 | + | View |
Petunia axillaris | Peaxi162Scf00382g00119 | 30S ribosomal protein 3-1, chloroplastic | Peaxi162Scf00382 | + | View |
Papaver somniferum | PSO017G5162 | NC_039362.1 | - | View | |
Papaver somniferum | PSO478G1471 | NC_039361.1 | - | View | |
Populus trichocarpa | Potri.010G127300 | K19032 - 30S ribosomal protein 3 (PSRP3) | Chr10 | - | View |
Populus trichocarpa | Potri.008G118700 | K19032 - 30S ribosomal protein 3 (PSRP3) | Chr08 | + | View |
Quercus lobata | QL01p043998 | 1 | - | View | |
Rhododendron simsii | Rhsim09G0110100 | chr09 | - | View | |
Striga asiatica | SGA_v2.0_scaffold170G38750 | scaffold170 | + | View | |
Salvia bowleyana | SalBow8G5571 | GWHASIU00000004 | - | View | |
Salix brachista | Sabra10G0096700 | GWHAAZH00000010 | - | View | |
Salix brachista | Sabra08G0090100 | GWHAAZH00000008 | + | View | |
Solanum lycopersicum | Solyc05g009570.3 | 30S ribosomal protein 3, chloroplastic (AHRD V3.3 *** A0A2G2VK36_CAPBA) | SL4.0ch05 | - | View |
Schrenkiella parvula | Sp5g23700 | K19032 - 30S ribosomal protein 3 (PSRP3) | ch5-6 | - | View |
Solanum pennellii | Sopen05g005380 | Ribosomal protein PSRP-3/Ycf65 | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 | BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 | Spenn-ch05 | - | View |
Solanum tuberosum | PGSC0003DMG401012965 | Plastid-specific 30S ribosomal protein 3, chloroplast | ST4.03ch05 | + | View |
Trochodendron aralioides | TAR629G0906 | group0 | + | View | |
Trochodendron aralioides | TAR371G0244 | group13 | - | View | |
Theobroma cacao | Thecc.02G357900 | Ribosomal protein PSRP-3/Ycf65 | Chromosome_2 | - | View |
Theobroma cacao | Thecc.04G135800 | Chromosome_4 | - | View | |
Tarenaya hassleriana | THA.LOC104821946 | 30S ribosomal protein 3-1%2C chloroplastic | NW_010966617.1 | - | View |
Utricularia gibba | unitig_22.g6874 | unitig_22 | - | View | |
Vaccinium macrocarpon | vmacro10545 | Similar to At1g68590: 30S ribosomal protein 3-1, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01031053001 | chr14 | - | View | |
Vitis vinifera | GSVIVG01011921001 | chr1 | + | View |