Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0048771 PREDICTED: MADS-box transcription factor 23-like isoform X2 [Nelumbo nucifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G14270 LG-7 - View
Aethionema arabicum Aa31LG6G14880 LG-6 - View
Acer truncatum Atru.chr3.1180 chr3 - View
Acer truncatum Atru.chr13.954 chr13 - View
Actinidia chinensis Actinidia15930 Lachesis_group11 + View
Actinidia chinensis Actinidia10277 Lachesis_group26 - View
Actinidia chinensis Actinidia16388 Lachesis_group25 + View
Arabidopsis lyrata AL4G12080 scaffold_4 + View
Aquilegia oxysepala Aqoxy6G00651 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JI0U8K PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7GTW3C PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z4CR3N PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT2G22540 K-box region and MADS-box transcription factor family protein Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. SHORT VEGETATIVE PHASE (SVP)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1)%3B Has 7469 Blast hits to 7448 proteins in 905 species: Archae - 3%3B Bacteria - 14%3B Metazoa - 824%3B Fungi - 324%3B Plants - 6168%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC02g08629 ChrC02 - View
Brassica carinata BcaB06g27809 ChrB06 + View
Brassica carinata BcaB03g15316 ChrB03 + View
Brassica napus C01p01250 C01 + View
Brassica napus C04p51780 C04 + View
Brassica napus A01p01110 A01 + View
Brassica rapa BraA04t17334Z A04 + View
Beta vulgaris EL10Ac6g13312 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G1061.37 PGAv.1.6.scaffold1061 - View
Corylus avellana Haze_03924 Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_22494 Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc10_g08290 Agamous-like MADS-box protein AGL16 chr10 - View
Coffea canephora Cc02_g20680 Putative MADS-box transcription factor 57 chr2 - View
Coffea canephora Cc07_g07970 MADS-box transcription factor 27 chr7 - View
Citrus clementina Ciclev10003094m.g scaffold_5 - View
Citrus clementina Ciclev10027571m.g scaffold_7 - View
Cardamine hirsuta CARHR113740 MADS-box transcription factor Chr4 + View
Cardamine hirsuta CARHR246360 AGAMOUS-like MADS-box transcription factor Chr7 - View
Carya illinoinensis CiPaw.06G157400 PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) Chr06 + View
Carya illinoinensis CiPaw.07G162300 PTHR11945//PTHR11945:SF147 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Chr07 - View
Carya illinoinensis CiPaw.08G144400 PTHR11945//PTHR11945:SF184 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Citrullus lanatus ClCG01G018230 MADS-box transcription factor 25 CG_Chr01 - View
Cucumis melo MELO3C007700.2 MADS-box transcription factor chr08 - View
Corchorus olitorius COL.COLO4_11687 Transcription factor%2C K-box AWUE01014732.1 - View
Capsella rubella Carub.0004s0171 PTHR11945:SF179 - MADS-BOX PROTEIN SVP scaffold_4 + View
Capsella rubella Carub.0007s0227 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED scaffold_7 + View
Daucus carota DCAR_010757 hypothetical protein DCARv2_Chr3 + View
Durio zibethinus Duzib116G0482 NW_019167949.1 - View
Durio zibethinus Duzib041G0051 NW_019167826.1 - View
Erigeron canadensis ECA246G4338 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.H02430 Chr08 + View
Erythranthe guttata Migut.N02838 scaffold_14 - View
Erythranthe guttata Migut.H00286 scaffold_8 + View
Eutrema salsugineum Thhalv10026139m.g PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED scaffold_1 + View
Eutrema salsugineum Thhalv10000308m.g PTHR11945:SF179 - MADS-BOX PROTEIN SVP scaffold_15 + View
Fragaria x ananassa FAN28G0449 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Fvb1-1 + View
Gossypium hirsutum Gohir.A06G030400 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED A06 - View
Gossypium hirsutum Gohir.D06G029700 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED D06 - View
Gossypium hirsutum Gohir.A05G217000 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED A05 - View
Gossypium hirsutum Gohir.D05G220400 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED D05 - View
Glycine max Glyma.01G020500 PTHR11945//PTHR11945:SF228 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.02G216600 PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Gm02 + View
Glycine max Glyma.09G201700 PTHR11945//PTHR11945:SF228 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm09 + View
Gossypium raimondii Gorai.009G227400 Chr09 - View
Gossypium raimondii Gorai.007G058200 Chr07 - View
Gossypium raimondii Gorai.010G032600 Chr10 - View
Helianthus annuus HanXRQChr15g0472781 Putative transcription factor, K-box HanXRQChr15 + View
Lupinus albus Lalb_Chr09g0325831 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Lalb_Chr09 - View
Lupinus albus Lalb_Chr16g0381531 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Lalb_Chr16 - View
Lotus japonicus LjContig00408g0018582 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Contig00408 - View
Lotus japonicus Lj2g0020722 PTHR11945//PTHR11945:SF228 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED chr2 - View
Lonicera japonica Lj2C430G5 GWHAAZE00000002 - View
Lonicera japonica Lj4A177T25 GWHAAZE00000004 - View
Magnolia biondii MBI16_g12289_MAGBIO AED:0.46 Chr16 - View
Malus domestica MD01G1043900 AGAMOUS-like 21 Chr01 + View
Manihot esculenta Manes.18G057830 Chromosome18 - View
Manihot esculenta Manes.13G103666 Chromosome13 - View
Medicago truncatula Medtr5g031000 MADS-box transcription factor chr5 - View
Nelumbo nucifera Nn5g29799 chr5 - View
Nicotiana tabacum Nitab4.5_0000036g0460 Transcription factor, MADS-box, Transcription factor, K-box Nitab4.5_0000036 - View
Punica granatum PGR031G0386 NC_045127.1 - View
Prunus persica Prupe.1G538700 PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Pp01 + View
Prunus persica Prupe.6G208900 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Pp06 + View
Pisum sativum Psat1g213000 MADS domain signature chr1LG6 - View
Pisum sativum Psat2g133760 MADS domain signature chr2LG1 + View
Populus trichocarpa Potri.002G109601 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Chr02 - View
Phaseolus vulgaris Phvul.002G143866 Chr02 - View
Phaseolus vulgaris Phvul.008G183700 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Chr08 + View
Quercus lobata QL06p037232 6 + View
Rhododendron simsii Rhsim06G0069700 chr06 - View
Salvia bowleyana SalBow2G0914 GWHASIU00000007 + View
Salix brachista Sabra09G0061000 GWHAAZH00000009 + View
Simmondsia chinensis Sc10g0000390 GWHAASQ00000010 - View
Simmondsia chinensis Sc16g0000710 GWHAASQ00000016 + View
Sechium edule Sed0004053 LG10 - View
Solanum lycopersicum Solyc02g091550.2 MADS box transcription factor AGAMOUS (AHRD V3.3 *** A0A1Q1NK16_PAELC) SL4.0ch02 + View
Schrenkiella parvula Sp4g01590 PTHR11945:SF179 - MADS-BOX PROTEIN SVP ch4-1 + View
Solanum pennellii Sopen02g036170 MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice), encodes a MADS box protein, highly expressed in the root. | AGAMOUS-like 21 (AGL21) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 Spenn-ch02 + View
Solanum pennellii Sopen04g030400 MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice), MADS box gene, transcription factor | AGAMOUS-like 44 (AGL44) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to nutrient, lateral root development | LOCATED IN: nucleus | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400009349 Mads box protein ST4.03ch04 + View
Selenicereus undatus Hund16616 Scaffold_33677 - View
Selenicereus undatus Hund14170 Scaffold_33679 - View
Trochodendron aralioides TAR381G0641 group11 - View
Theobroma cacao Thecc.01G084900 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104804177 MADS-box protein SVP-like NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104819303 agamous-like MADS-box protein AGL27 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104824912 MADS-box protein SVP-like NW_010966933.1 + View
Tarenaya hassleriana THA.LOC104804844 agamous-like MADS-box protein AGL18 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104798533 MADS-box transcription factor 23-like isoform X1 NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104807663 agamous-like MADS-box protein AGL21 NW_010963495.1 - View
Trifolium pratense TPR.G37109 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI56G0284 NC_052242.1 - View
Vaccinium macrocarpon vmacro01897 Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18040 Similar to MADS27: MADS-box transcription factor 27 (Oryza sativa subsp. japonica OX%3D39947) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01856 Similar to SVP: MADS-box protein SVP (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05524 Similar to MADS27: MADS-box transcription factor 27 (Oryza sativa subsp. japonica OX%3D39947) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1511 CM024073.1 - View
Vitis vinifera GSVIVG01009219001 chr18 + View
Vitis vinifera GSVIVG01003858001 chrUn - View