Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014993 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial, partial [Vitis vinifera] Chr1 - View
CSS0006275 PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.435 chr13 - View
Acer truncatum Atru.chr3.605 chr3 - View
Actinidia chinensis Actinidia16040 Lachesis_group11 + View
Amaranthus hybridus Ah.03g141120 Mannan endo-1,4-beta-mannosidase 1 (EC 3.2.1.78) (Beta-mannanase 1) (Endo-beta-1,4-mannanase 1) (OsMAN1) AmaHy_arrow1_Scaffold_3 + View
Amaranthus hybridus Ah.03g139200 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial AmaHy_arrow1_Scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8QL644 K19355 - mannan endo-1,4-beta-mannosidase (MAN) arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R3ZIXT K19355 - mannan endo-1,4-beta-mannosidase (MAN) arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GW0XZC 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62890.1)%3B Has 32632 Blast hits to 12262 proteins in 174 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 25%3B Fungi - 25%3B Plants - 32307%3B Viruses - 0%3B Other Eukaryotes - 275 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC04g23128 ChrC04 - View
Brassica napus A07p17460 A07 - View
Brassica rapa BraA07t29466Z A07 - View
Beta vulgaris EL10Ac1g00645 Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G53.12 PGAv.1.6.scaffold53 - View
Cannabis sativa CANSAT01G2646 NC_044373.1 - View
Cannabis sativa CANSAT54G0601 NC_044375.1 + View
Cannabis sativa CANSAT25G0217 NC_044370.1 + View
Citrus clementina Ciclev10001262m.g scaffold_5 + View
Carpinus fangiana Cfa005028 Cfa02 + View
Carya illinoinensis CiPaw.07G159000 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Chr07 - View
Carya illinoinensis CiPaw.01G044400 PTHR31451:SF8 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED Chr01 + View
Carya illinoinensis CiPaw.02G019300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 - View
Citrullus lanatus ClCG01G019660 Pentatricopeptide repeat-containing protein CG_Chr01 - View
Citrullus lanatus ClCG05G018810 Mannan endo-1,4-beta-mannosidase CG_Chr05 - View
Cucumis melo MELO3C016403.2 pentatricopeptide repeat-containing protein At5g44230 chr07 - View
Cucumis melo MELO3C007835.2 pentatricopeptide repeat-containing protein At5g66520 chr08 - View
Carica papaya Cpa.g.sc6.135 supercontig_6 - View
Chenopodium quinoa AUR62014499 MAN7: Mannan endo-1,4-beta-mannosidase 7 C_Quinoa_Scaffold_1566 - View
Capsella rubella Carub.0008s2801 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_8 - View
Cucumis sativus L. CsaV3_6G046330 pentatricopeptide repeat-containing protein At5g66520 chr6 - View
Cucumis sativus L. CsaV3_4G005450 Pentatricopeptide repeat-containing protein chr4 + View
Cucumis sativus L. CsaV3_3G045360 Mannan endo-1,4-beta-mannosidase-like protein chr3 + View
Daucus carota DCAR_017307 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv23491 GWHABJS00000005 + View
Davidia involucrata Dinv40013 GWHABJS00000014 - View
Durio zibethinus Duzib147G0393 NW_019168470.1 - View
Durio zibethinus Duzib093G1803 NW_019167937.1 + View
Durio zibethinus Duzib041G0083 NW_019167826.1 - View
Eucalyptus grandis Eucgr.I02411 Chr09 - View
Fragaria x ananassa FAN27G0420 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Fvb2-1 - View
Fragaria x ananassa FAN19G2060 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-4 - View
Fragaria x ananassa FAN23G0176 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-3 - View
Fragaria vesca FvH4_2g39510 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Fvb2 - View
Gossypium hirsutum Gohir.A05G192400 K19355 - mannan endo-1,4-beta-mannosidase (MAN) A05 - View
Gossypium hirsutum Gohir.D11G189350 PF00150//PF01535//PF13041 - Cellulase (glycosyl hydrolase family 5) (Cellulase) // PPR repeat (PPR) // PPR repeat family (PPR_2) D11 - View
Gossypium hirsutum Gohir.D12G064100 PF01535//PF13041//PF13176//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Tetratricopeptide repeat (TPR_7) // DYW family of nucleic acid deaminases (DYW_deaminase) D12 + View
Gossypium hirsutum Gohir.A11G182750 PF00150//PF01535//PF13041 - Cellulase (glycosyl hydrolase family 5) (Cellulase) // PPR repeat (PPR) // PPR repeat family (PPR_2) A11 - View
Gossypium hirsutum Gohir.D05G195600 K19355 - mannan endo-1,4-beta-mannosidase (MAN) D05 - View
Gossypium hirsutum Gohir.A12G064200 PF01535//PF13041//PF13176//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Tetratricopeptide repeat (TPR_7) // DYW family of nucleic acid deaminases (DYW_deaminase) A12 + View
Glycine max Glyma.17G252400 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Gm17 + View
Glycine max Glyma.11G069901 PF01535 - PPR repeat (PPR) Gm11 - View
Glycine max Glyma.04G030400 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Gm04 - View
Glycine max Glyma.06G030500 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Gm06 - View
Gossypium raimondii Gorai.007G201600 Chr07 - View
Gossypium raimondii Gorai.008G067300 Chr08 + View
Gossypium raimondii Gorai.009G200500 Chr09 - View
Lupinus albus Lalb_Chr19g0138681 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Lalb_Chr19 - View
Lupinus albus Lalb_Chr09g0322181 PTHR31451//PTHR31451:SF8 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED Lalb_Chr09 - View
Lotus japonicus Lj1g0013988 K19355 - mannan endo-1,4-beta-mannosidase (MAN) chr1 - View
Lotus japonicus Lj6g0009714 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr6 - View
Lonicera japonica Lj4A36T69 GWHAAZE00000004 - View
Lonicera japonica Lj2C456T8 GWHAAZE00000002 + View
Lonicera japonica Lj4A204T69 GWHAAZE00000004 + View
Magnolia biondii MBI16_g07732_MAGBIO AED:0.04 Chr16 - View
Malus domestica MD02G1143600 Tetratricopeptide repeat (TPR)-like superfamily protein Chr02 - View
Manihot esculenta Manes.05G156900 Chromosome05 - View
Medicago truncatula Medtr5g020650 PPR containing plant-like protein chr5 - View
Medicago truncatula Medtr3g112060 mannan endo-1,4-beta-mannosidase-like protein chr3 + View
Nelumbo nucifera Nn5g29651 chr5 - View
Nelumbo nucifera Nn4g24357 chr4 - View
Punica granatum PGR102G0829 NC_045129.1 - View
Prunus persica Prupe.8G091500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp08 + View
Prunus persica Prupe.7G157700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp07 + View
Papaver somniferum PSO541G0346 NC_039363.1 + View
Populus trichocarpa Potri.005G229600 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Chr05 + View
Phaseolus vulgaris Phvul.002G032000 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr02 - View
Quercus lobata QL06p046590 6 - View
Quercus lobata QL02p009119 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0100941 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim07G0238000 chr07 - View
Rhododendron simsii Rhsim08G0119700 chr08 + View
Striga asiatica SGA_v2.0_scaffold201G41396 scaffold201 - View
Salvia bowleyana SalBow7G4119 GWHASIU00000005 - View
Salix brachista Sabra07G0018800 GWHAAZH00000007 - View
Sechium edule Sed0018406 LG01 - View
Sechium edule Sed0015192 LG07 - View
Sechium edule Sed0023367 LG13 - View
Sechium edule Sed0025772 LG10 + View
Sechium edule Sed0013687 LG14 - View
Solanum lycopersicum Solyc02g062630.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A498_CAPAN) SL4.0ch02 - View
Solanum lycopersicum Solyc04g080620.3 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** A0A2I0WI30_9ASPA) SL4.0ch04 + View
Schrenkiella parvula Sp2g30210 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch2-4 - View
Solanum pennellii Sopen04g034210 Glycosyl hydrolase superfamily protein | FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Glycoside hydrolase, family 5 , Glycoside hydrolase, subgroup, catalytic core | BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein Spenn-ch04 + View
Solanum pennellii Sopen02g013660 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400015486 Pentatricopeptide repeat-containing protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400003695 Endo-1,4-beta-mannosidase protein 1 ST4.03ch04 + View
Trochodendron aralioides TAR376G0405 group14 - View
Trochodendron aralioides TAR628G0186 group5 + View
Theobroma cacao Thecc.01G030800 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104819201 putative pentatricopeptide repeat-containing protein At3g47840 NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104826697 pentatricopeptide repeat-containing protein At5g66500%2C mitochondrial NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104821301 mannan endo-1%2C4-beta-mannosidase 7 NW_010966459.1 + View
Tripterygium wilfordii TWI73G1229 NC_052232.1 + View
Tripterygium wilfordii TWI36G1327 NC_052237.1 + View
Vaccinium macrocarpon vmacro21665 Similar to MAN7: Mannan endo-1,4-beta-mannosidase 7 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17812 Similar to MAN7: Mannan endo-1,4-beta-mannosidase 7 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0642 CM024074.1 - View
Vigna mungo VMungo0251G2668 CM024069.1 + View
Vitis vinifera GSVIVG01009746001 chr18 + View
Vitis vinifera GSVIVG01024139001 chr3 - View
Vitis vinifera GSVIVG01018923001 chr4 + View