Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr8.1954 | chr8 | + | View | |
Actinidia chinensis | Actinidia03783 | Lachesis_group9 | + | View | |
Avicennia marina | MSTRG.5684 | ScioBoG_102839_HRSCAF_103093 | + | View | |
Aquilegia oxysepala | Aqoxy2G02026 | CHR02 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.PV01EY | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | arahy.Tifrunner.gnm1.Arahy.08 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.0XQ1R2 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | arahy.Tifrunner.gnm1.Arahy.18 | - | View |
Arabidopsis thaliana | AT5G59860 | RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | + | View |
Cicer arietinum L. | Ca_08784_v3 | Ca_LG3_v3 | + | View | |
Coffea canephora | Cc01_g12400 | Putative Cold-inducible RNA-binding protein | chr1 | + | View |
Citrus clementina | Ciclev10029673m.g | scaffold_8 | + | View | |
Ceratophyllum demersum | CDE02G0017 | 1 | + | View | |
Carpinus fangiana | Cfa011456 | Cfa04 | + | View | |
Carya illinoinensis | CiPaw.13G098300 | K13195 - cold-inducible RNA-binding protein (CIRBP) | Chr13 | - | View |
Citrullus lanatus | ClCG04G008400 | RNA binding protein | CG_Chr04 | + | View |
Cucumis melo | MELO3C003109.2 | glycine-rich RNA-binding protein 4, mitochondrial | chr08 | - | View |
Corchorus olitorius | COL.COLO4_18460 | hypothetical protein | AWUE01016465.1 | + | View |
Carica papaya | Cpa.g.sc190.24 | supercontig_190 | - | View | |
Capsella rubella | Carub.0005s1188 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | scaffold_5 | - | View |
Capsella rubella | Carub.0008s2060 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | scaffold_8 | - | View |
Cucumis sativus L. | CsaV3_4G024750 | RNA-binding family protein | chr4 | - | View |
Davidia involucrata | Dinv37203 | GWHABJS00000021 | - | View | |
Davidia involucrata | Dinv35634 | GWHABJS00000015 | + | View | |
Durio zibethinus | Duzib093G0167 | NW_019167937.1 | - | View | |
Erigeron canadensis | ECA236G1727 | Conyza_canadensis_scaffold:3 | - | View | |
Eucalyptus grandis | Eucgr.J02066 | Chr10 | - | View | |
Erythranthe guttata | Migut.J00360 | scaffold_10 | + | View | |
Eutrema salsugineum | Thhalv10015391m.g | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | scaffold_2 | - | View |
Fragaria x ananassa | FAN11G1225 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb3-4 | + | View |
Fragaria x ananassa | FAN25G1495 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb3-1 | - | View |
Fragaria x ananassa | FAN16G0665 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Fvb3-3 | + | View |
Gossypium hirsutum | Gohir.D01G209000 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | D01 | - | View |
Gossypium hirsutum | Gohir.A01G220000 | PTHR24012//PTHR24012:SF491 - FAMILY NOT NAMED // FOUND IN NEURONS, ISOFORM A-RELATED | A01 | - | View |
Glycine max | Glyma.15G040500 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Gm15 | - | View |
Glycine max | Glyma.03G172300 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Gm03 | + | View |
Glycine max | Glyma.19G173200 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Gm19 | + | View |
Glycine max | Glyma.13G333700 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Gm13 | + | View |
Gossypium raimondii | Gorai.002G254200 | Chr02 | - | View | |
Helianthus annuus | HanXRQChr05g0134271 | Probable RNA-binding (RRM/RBD/RNP motifs) family protein | HanXRQChr05 | + | View |
Hydrangea macrophylla | Hma1.2p1_0624F.1_g191310 | Hma1.2p1_0624F.1 | + | View | |
Lupinus albus | Lalb_Chr14g0375031 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Lalb_Chr14 | - | View |
Lotus japonicus | Lj3g0009978 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | chr3 | - | View |
Lotus japonicus | Lj1g0023993 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | chr1 | - | View |
Lactuca sativa | Lsat_1_v5_gn_8_77780 | Lsat_1_v8_lg_8 | - | View | |
Magnolia biondii | MBI14_g24309_MAGBIO | AED:0.10 | Chr14 | - | View |
Malus domestica | MD12G1138600 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr12 | - | View |
Malus domestica | MD04G1122000 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr04 | - | View |
Medicago truncatula | Medtr7g099940 | RNA-binding (RRM/RBD/RNP motif) family protein | chr7 | + | View |
Medicago truncatula | Medtr2g096560 | RNA-binding (RRM/RBD/RNP motif) family protein | chr2 | + | View |
Nelumbo nucifera | Nn2g12919 | chr2 | - | View | |
Nicotiana tabacum | Nitab4.5_0003782g0140 | RNA recognition motif domain, Nucleotide-binding, alpha-beta plait | Nitab4.5_0003782 | - | View |
Oryza sativa ssp. japonica | Os03g0278800 | Nucleotide-binding, alpha-beta plait domain containing protein. | chr03 | - | View |
Punica granatum | PGR004G1304 | NC_045131.1 | - | View | |
Punica granatum | PGR004G0745 | NC_045131.1 | + | View | |
Pisum sativum | Psat3g048880 | RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) | chr3LG5 | - | View |
Papaver somniferum | PSO648G0051 | NW_020648748.1 | - | View | |
Populus trichocarpa | Potri.001G236200 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr01 | + | View |
Phaseolus vulgaris | Phvul.001G170000 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | Chr01 | - | View |
Phaseolus vulgaris | Phvul.L003243 | PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) | scaffold_15 | + | View |
Quercus lobata | QL08p060742 | 8 | - | View | |
Quercus lobata | QL01p033075 | 1 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr3g0467261 | RcHm_v2.0_Chr3 | + | View | |
Rhododendron simsii | Rhsim01G0225000 | chr01 | + | View | |
Simmondsia chinensis | Sc20g0004630 | GWHAASQ00000020 | - | View | |
Simmondsia chinensis | Sc12g0001650 | GWHAASQ00000012 | - | View | |
Solanum lycopersicum | Solyc11g073238.1 | RNA-binding protein (AHRD V3.3 *** A0A2T6CUF4_9BACT) | SL4.0ch11 | + | View |
Schrenkiella parvula | Sp5g15580 | K13195 - cold-inducible RNA-binding protein (CIRBP) | ch5-1 | + | View |
Trochodendron aralioides | TAR623G0161 | group7 | - | View | |
Theobroma cacao | Thecc.05G044200 | RNA-binding family protein | Chromosome_5 | + | View |
Trifolium pratense | TPR.G34295 | Tp57577_TGAC_v2_LG7 | + | View | |
Tripterygium wilfordii | TWI53G1683 | NC_052244.1 | - | View | |
Tripterygium wilfordii | TWI79G1193 | NC_052238.1 | - | View | |
Vaccinium macrocarpon | vmacro14509 | Similar to S-RBP11: Small RNA-binding protein 11, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr7_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1383G0574 | CM024070.1 | - | View | |
Vitis vinifera | GSVIVG01025527001 | chr8 | - | View | |
Vitis vinifera | GSVIVG01025020001 | chr6 | + | View | |
Zea mays | Zm00001eb012660 | Zm00001e001247 RNA binding protein | 1 | - | View |