Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001363 PREDICTED: pentatricopeptide repeat-containing protein At4g30700 [Vitis vinifera] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia34388 Lachesis_group2 - View
Actinidia chinensis Actinidia12009 Lachesis_group11 + View
Arabidopsis thaliana AT4G33990 Tetratricopeptide repeat (TPR)-like superfamily protein embryo defective 2758 (EMB2758)%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: shoot apex%2C embryo%3B EXPRESSED DURING: D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G30700.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC01g00927 ChrC01 - View
Brassica carinata BcaB01g00680 ChrB01 - View
Brassica oleracea BolC9t54169H C9 - View
Cicer arietinum L. Ca_13224_v3 Ca_LG4_v3 - View
Corylus avellana Haze_10214 Similar to PCMP-H3: Pentatricopeptide repeat-containing protein At4g14820 (Arabidopsis thaliana OX%3D3702) 9 + View
Corylus avellana Haze_15336 Similar to ELI1: Pentatricopeptide repeat-containing protein ELI1, chloroplastic (Arabidopsis thaliana OX%3D3702) 11 + View
Citrus clementina Ciclev10025167m.g scaffold_7 - View
Carpinus fangiana Cfa004611 Cfa02 + View
Carpinus fangiana Cfa004077 Cfa01 - View
Carya illinoinensis CiPaw.06G168000 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr06 - View
Citrullus lanatus ClCG10G010820 Pentatricopeptide repeat-containing family protein CG_Chr10 + View
Cucumis melo MELO3C007594.2 Pentatricopeptide repeat-containing protein chr08 - View
Cucumis melo MELO3C017967.2 Pentatricopeptide repeat-containing family protein chr07 - View
Carica papaya Cpa.g.sc292.4 supercontig_292 + View
Chenopodium quinoa AUR62010362 PCMP-H57: Pentatricopeptide repeat-containing protein At3g14330 C_Quinoa_Scaffold_1257 + View
Chenopodium quinoa AUR62003946 ELI1: Pentatricopeptide repeat-containing protein ELI1, chloroplastic C_Quinoa_Scaffold_2370 - View
Capsella rubella Carub.0007s0640 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_7 + View
Cucumis sativus L. CsaV3_7G008020 Pentatricopeptide repeat-containing protein chr7 - View
Cucumis sativus L. CsaV3_6G043680 Pentatricopeptide repeat chr6 - View
Davidia involucrata Dinv26881 GWHABJS00000014 - View
Durio zibethinus Duzib147G1411 NW_019168470.1 + View
Fragaria x ananassa FAN23G0334 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb1-3 - View
Fragaria x ananassa FAN28G1101 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb1-1 + View
Fragaria x ananassa FAN19G0430 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb1-4 - View
Fragaria vesca FvH4_1g16950 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb1 - View
Gossypium hirsutum Gohir.D04G158800 K17279 - receptor expression-enhancing protein 5/6 (REEP5_6) D04 + View
Gossypium hirsutum Gohir.A04G117100 K17279 - receptor expression-enhancing protein 5/6 (REEP5_6) A04 + View
Gossypium hirsutum Gohir.A11G217850 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A11 + View
Glycine max Glyma.17G165800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm17 + View
Gossypium raimondii Gorai.012G146200 Chr12 + View
Helianthus annuus HanXRQChr09g0266341 Probable pentatricopeptide repeat (PPR) superfamily protein HanXRQChr09 - View
Lotus japonicus Lj5g0004114 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr5 + View
Lonicera japonica Lj5P216T42 GWHAAZE00000005 + View
Malus domestica MD10G1100300 Tetratricopeptide repeat (TPR)-like superfamily protein Chr10 - View
Malus domestica MD05G1092100 Protein of unknown function Chr05 + View
Malus domestica MD15G1290500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr15 - View
Manihot esculenta Manes.13G116400 Chromosome13 + View
Manihot esculenta Manes.10G076200 Chromosome10 - View
Medicago truncatula Medtr4g095065 pentatricopeptide (PPR) repeat protein chr4 - View
Nelumbo nucifera Nn1g04675 chr1 + View
Olea europaea Oeu010410.1 chr15 + View
Petunia axillaris Peaxi162Scf00152g00010 Pentatricopeptide repeat-containing protein Peaxi162Scf00152 - View
Punica granatum PGR004G1295 NC_045131.1 - View
Prunus persica Prupe.8G138100 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Pp08 + View
Papaver somniferum PSO210G5609 NC_039359.1 - View
Papaver somniferum PSO675G6434 NC_039358.1 - View
Populus trichocarpa Potri.007G050200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr07 - View
Phaseolus vulgaris Phvul.007G042100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr07 + View
Quercus lobata QL09p044438 9 + View
Quercus lobata QL11p032496 11 - View
Quercus lobata QL08p037377 8 - View
Rhododendron simsii Rhsim01G0139700 chr01 - View
Rhododendron simsii Rhsim11G0156000 chr11 + View
Rhododendron simsii RhsimUnG0127200 ctg322 + View
Striga asiatica SGA_v2.0_scaffold32G13026 scaffold32 - View
Salvia bowleyana SalBow6G6599 GWHASIU00000002 + View
Salix brachista Sabra07G0044600 GWHAAZH00000007 - View
Simmondsia chinensis Sc08g0001250 GWHAASQ00000008 - View
Sechium edule Sed0020135 LG10 + View
Sechium edule Sed0005327 LG14 - View
Theobroma cacao Thecc.02G112000 Pentatricopeptide repeat-containing protein Chromosome_2 + View
Tripterygium wilfordii TWI09G0414 NC_052245.1 - View
Vaccinium macrocarpon vmacro01988 Similar to PCMP-H84: Putative pentatricopeptide repeat-containing protein At3g08820 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0764 CM024074.1 + View
Vitis vinifera GSVIVG01009407001 chr18 + View
Vitis vinifera GSVIVG01000178001 chr7 + View