Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG1G12280 | LG-1 | - | View | |
Acer truncatum | Atru.chr3.3751 | chr3 | + | View | |
Acer truncatum | Atru.chr8.2529 | chr8 | - | View | |
Actinidia chinensis | Actinidia37280 | Lachesis_group24 | - | View | |
Actinidia chinensis | Actinidia07097 | Lachesis_group13 | - | View | |
Actinidia chinensis | Actinidia03013 | Lachesis_group22 | - | View | |
Arabidopsis lyrata | AL8G36680 | scaffold_8 | - | View | |
Arabidopsis lyrata | AL6G12070 | scaffold_6 | - | View | |
Aquilegia oxysepala | Aqoxy2G01893 | CHR02 | + | View | |
Aquilegia oxysepala | Aqoxy4G03161 | CHR04 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.A77B5H | PTHR26402//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.PDCB5X | PTHR26402//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | arahy.Tifrunner.gnm1.Arahy.03 | + | View |
Arabidopsis thaliana | AT5G60100 | pseudo-response regulator 3 Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods%2C based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL. pseudo-response regulator 3 (PRR3)%3B CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006)%2C Signal transduction response regulator%2C receiver domain (InterPro:IPR001789)%2C CCT domain (InterPro:IPR010402)%3B BEST Arabidopsis thaliana protein match is: pseudo-response regulator 7 (TAIR:AT5G02810.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr5 | - | View |
Arabidopsis thaliana | AT5G02810 | pseudo-response regulator 7 PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY. pseudo-response regulator 7 (PRR7)%3B CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006)%2C Signal transduction response regulator%2C receiver domain (InterPro:IPR001789)%2C CCT domain (InterPro:IPR010402)%3B BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr5 | - | View |
Brassica carinata | BcaB05g21867 | ChrB05 | + | View | |
Brassica napus | A10p17240 | A10 | - | View | |
Brassica napus | C09p52600 | C09 | - | View | |
Brassica napus | C02p11880 | C02 | + | View | |
Brassica oleracea | BolC9t58126H | C9 | - | View | |
Brassica rapa | BraA02t05742Z | A02 | + | View | |
Brassica rapa | BraA10t43808Z | A10 | - | View | |
Beta vulgaris | EL10Ac2g03535 | K12129 - pseudo-response regulator 7 (PRR7) | Chr2_EL10_PGA_scaffold6 | - | View |
Corylus avellana | Haze_23970 | Similar to PRR73: Two-component response regulator-like PRR73 (Oryza sativa subsp. indica OX%3D39946) | 6 | + | View |
Corylus avellana | Haze_16956 | Similar to PRR73: Two-component response regulator-like PRR73 (Oryza sativa subsp. indica OX%3D39946) | 11 | + | View |
Coffea canephora | Cc06_g03460 | Putative Two-component response regulator-like APRR7 | chr6 | + | View |
Citrus clementina | Ciclev10030911m.g | scaffold_4 | - | View | |
Citrus clementina | Ciclev10027794m.g | scaffold_8 | + | View | |
Ceratophyllum demersum | CDE02G1366 | 1 | - | View | |
Ceratophyllum demersum | CDE09G1025 | 7 | + | View | |
Carpinus fangiana | Cfa011399 | Cfa04 | + | View | |
Cardamine hirsuta | CARHR273730 | Pseudo-response regulator 3 | Chr8 | - | View |
Cardamine hirsuta | CARHR210520 | pseudo-response regulator 7 | Chr6 | + | View |
Carya illinoinensis | CiPaw.14G075300 | PTHR26402:SF543 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Chr14 | - | View |
Carya illinoinensis | CiPaw.01G278200 | PTHR26402//PTHR26402:SF525//PTHR31319//PTHR31319:SF15 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED | Chr01 | + | View |
Corchorus olitorius | COL.COLO4_18397 | hypothetical protein | AWUE01016459.1 | + | View |
Carica papaya | Cpa.g.sc1.291 | supercontig_1 | + | View | |
Cucumis sativus L. | CsaV3_4G024430 | two-component response regulator-like APRR7 | chr4 | + | View |
Daucus carota | DCAR_015255 | hypothetical protein | DCARv2_Chr4 | - | View |
Davidia involucrata | Dinv35692 | GWHABJS00000015 | - | View | |
Davidia involucrata | Dinv31378 | GWHABJS00000004 | + | View | |
Durio zibethinus | Duzib168G0521 | NW_019168159.1 | + | View | |
Durio zibethinus | Duzib114G0232 | NW_019167926.1 | - | View | |
Durio zibethinus | Duzib128G1496 | NW_019168481.1 | - | View | |
Durio zibethinus | Duzib093G2124 | NW_019167937.1 | + | View | |
Erigeron canadensis | ECA233G3044 | Conyza_canadensis_scaffold:1 | + | View | |
Eucalyptus grandis | Eucgr.J02111 | Chr10 | - | View | |
Erythranthe guttata | Migut.J00402 | scaffold_10 | - | View | |
Fragaria x ananassa | FAN05G2381 | PTHR26402:SF543 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Fvb6-3 | + | View |
Fragaria x ananassa | FAN09G3606 | PTHR26402//PTHR26402:SF525 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED | Fvb6-2 | + | View |
Fragaria x ananassa | FAN02G3803 | K12129 - pseudo-response regulator 7 (PRR7) | Fvb6-4 | - | View |
Fragaria vesca | FvH4_6g15060 | K12129 - pseudo-response regulator 7 (PRR7) | Fvb6 | - | View |
Gossypium hirsutum | Gohir.D05G099700 | K12129 - pseudo-response regulator 7 (PRR7) | D05 | - | View |
Gossypium hirsutum | Gohir.A05G099900 | PTHR26402//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | A05 | - | View |
Glycine max | Glyma.10G048100 | PTHR26402//PTHR26402:SF525//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Gm10 | - | View |
Glycine max | Glyma.11G148362 | PTHR26402//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Gm11 | - | View |
Glycine max | Glyma.13G135900 | PTHR26402//PTHR26402:SF525//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Gm13 | - | View |
Glycine max | Glyma.12G073900 | PTHR26402//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Gm12 | + | View |
Gossypium raimondii | Gorai.009G103700 | Chr09 | - | View | |
Lupinus albus | Lalb_Chr01g0004011 | PTHR26402:SF543 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Lalb_Chr01 | - | View |
Lotus japonicus | Lj3g0016171 | PTHR26402:SF543 - TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | chr3 | - | View |
Lonicera japonica | Lj3C977T14 | GWHAAZE00000003 | + | View | |
Lonicera japonica | Lj2A105T66 | GWHAAZE00000002 | - | View | |
Malus domestica | MD07G1182300 | pseudo-response regulator 7 | Chr07 | + | View |
Malus domestica | MD01G1114400 | pseudo-response regulator 7 | Chr01 | + | View |
Manihot esculenta | Manes.04G027400 | Chromosome04 | + | View | |
Medicago truncatula | Medtr4g061360 | PRR response regulator | chr4 | + | View |
Punica granatum | PGR004G0181 | NC_045131.1 | + | View | |
Prunus persica | Prupe.6G244200 | K12129 - pseudo-response regulator 7 (PRR7) | Pp06 | + | View |
Populus trichocarpa | Potri.008G046200 | PTHR26402//PTHR26402:SF543 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 | Chr08 | + | View |
Populus trichocarpa | Potri.010G215200 | PTHR26402//PTHR26402:SF525 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED | Chr10 | - | View |
Phaseolus vulgaris | Phvul.011G070600 | K12129 - pseudo-response regulator 7 (PRR7) | Chr11 | - | View |
Quercus lobata | QL01p035484 | 1 | - | View | |
Quercus lobata | QL07p045617 | 7 | + | View | |
Quercus lobata | QL08p057302 | 8 | + | View | |
Striga asiatica | SGA_v2.0_scaffold126G33876 | scaffold126 | - | View | |
Salix brachista | Sabra10G0166300 | GWHAAZH00000010 | - | View | |
Salix brachista | Sabra08G0032500 | GWHAAZH00000008 | + | View | |
Schrenkiella parvula | Sp6g21750 | K12131 - pseudo-response regulator 3 (PRR3) | ch6-6 | - | View |
Schrenkiella parvula | Sp6g39770 | K12129 - pseudo-response regulator 7 (PRR7) | ch6-6 | + | View |
Trochodendron aralioides | TAR369G0307 | group18 | - | View | |
Trochodendron aralioides | TAR633G2656 | group2 | - | View | |
Trochodendron aralioides | TAR623G1705 | group7 | + | View | |
Theobroma cacao | Thecc.09G335000 | Pseudo-response regulator 7 | Chromosome_9 | - | View |
Tarenaya hassleriana | THA.LOC104799475 | two-component response regulator-like APRR3 | NW_010968505.1 | - | View |
Trifolium pratense | TPR.G2964 | Tp57577_TGAC_v2_LG4 | + | View | |
Tripterygium wilfordii | TWI79G0853 | NC_052238.1 | + | View | |
Tripterygium wilfordii | TWI31G0136 | NC_052233.1 | + | View | |
Vitis vinifera | GSVIVG01032644001 | chr13 | + | View | |
Vitis vinifera | GSVIVG01025088001 | chr6 | + | View |