Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG2G4470 | LG-2 | - | View | |
Acer truncatum | Atru.chr8.1903 | chr8 | + | View | |
Actinidia chinensis | Actinidia06077 | Lachesis_group11 | - | View | |
Actinidia chinensis | Actinidia36023 | Lachesis_group4 | - | View | |
Arabidopsis lyrata | AL5G18450 | scaffold_5 | + | View | |
Avicennia marina | MSTRG.3218 | ScioBoG_102835_HRSCAF_103059 | - | View | |
Aquilegia oxysepala | Aqoxy3G03281 | CHR03 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.QM6JB0 | K09272 - structure-specific recognition protein 1 (SSRP1) | arahy.Tifrunner.gnm1.Arahy.20 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.T0AAPV | K09272 - structure-specific recognition protein 1 (SSRP1) | arahy.Tifrunner.gnm1.Arahy.10 | - | View |
Arabidopsis thaliana | AT3G28730 | high mobility group encodes a component of the FAcilitates Chromatin Transcription (FACT) complex%2C SSRP1. Along with STP16 binds to the promoter of FLC. high mobility group (HMG)%3B CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969)%2C High mobility group%2C superfamily (InterPro:IPR009071)%2C High mobility group%2C HMG1/HMG2 (InterPro:IPR000910)%3B BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2)%3B Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 5623%3B Fungi - 822%3B Plants - 671%3B Viruses - 15%3B Other Eukaryotes - 921 (source: NCBI BLink). | Chr3 | + | View |
Brassica carinata | BcaC06g33636 | ChrC06 | + | View | |
Brassica napus | A02p36020 | A02 | + | View | |
Brassica napus | C07p37670 | C07 | + | View | |
Brassica napus | C02p54860 | C02 | + | View | |
Brassica napus | A06p40380 | A06 | - | View | |
Brassica oleracea | BolC7t44284H | C7 | + | View | |
Brassica rapa | BraA06t26956Z | A06 | - | View | |
Brassica rapa | BraA02t08601Z | A02 | + | View | |
Capsicum annuum | CAN.G206.123 | PGAv.1.6.scaffold206 | - | View | |
Cannabis sativa | CANSAT64G1196 | NC_044379.1 | - | View | |
Corylus avellana | Haze_14579 | Similar to SSRP1: FACT complex subunit SSRP1 (Vicia faba OX%3D3906) | 5 | + | View |
Coffea canephora | Cc07_g03050 | FACT complex subunit SSRP1 | chr7 | - | View |
Citrus clementina | Ciclev10011266m.g | scaffold_6 | - | View | |
Cardamine hirsuta | CARHR151710 | FACT complex subunit SSRP1 | Chr5 | + | View |
Carya illinoinensis | CiPaw.03G029600 | K09272 - structure-specific recognition protein 1 (SSRP1) | Chr03 | + | View |
Carya illinoinensis | CiPaw.04G019600 | K09272 - structure-specific recognition protein 1 (SSRP1) | Chr04 | + | View |
Citrullus lanatus | ClCG10G014840 | FACT complex subunit SSRP1 | CG_Chr10 | - | View |
Cucumis melo | MELO3C009890.2 | FACT complex subunit SSRP1 | chr04 | - | View |
Capsella rubella | Carub.0005s0728 | K09272 - structure-specific recognition protein 1 (SSRP1) | scaffold_5 | + | View |
Cucumis sativus L. | CsaV3_3G041690 | FACT complex subunit SSRP1 | chr3 | + | View |
Daucus carota | DCAR_011159 | hypothetical protein | DCARv2_Chr3 | + | View |
Davidia involucrata | Dinv33721 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib147G1608 | NW_019168470.1 | - | View | |
Durio zibethinus | Duzib264G0140 | NW_019167960.1 | + | View | |
Erigeron canadensis | ECA238G2291 | Conyza_canadensis_scaffold:6 | + | View | |
Eucalyptus grandis | Eucgr.I01920 | Chr09 | - | View | |
Erythranthe guttata | Migut.K01331 | scaffold_11 | + | View | |
Erythranthe guttata | Migut.H00892 | scaffold_8 | - | View | |
Eutrema salsugineum | Thhalv10003803m.g | PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED | scaffold_6 | - | View |
Fragaria x ananassa | FAN02G3930 | PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED | Fvb6-4 | + | View |
Fragaria x ananassa | FAN09G2305 | K09272 - structure-specific recognition protein 1 (SSRP1) | Fvb6-2 | - | View |
Fragaria x ananassa | FAN14G0823 | K09272 - structure-specific recognition protein 1 (SSRP1) | Fvb6-1 | - | View |
Fragaria vesca | FvH4_6g49210 | K09272 - structure-specific recognition protein 1 (SSRP1) | Fvb6 | + | View |
Gossypium hirsutum | Gohir.A09G021800 | K09272 - structure-specific recognition protein 1 (SSRP1) | A09 | - | View |
Gossypium hirsutum | Gohir.D11G073100 | K09272 - structure-specific recognition protein 1 (SSRP1) | D11 | + | View |
Gossypium hirsutum | Gohir.D09G021100 | K09272 - structure-specific recognition protein 1 (SSRP1) | D09 | - | View |
Glycine max | Glyma.13G064800 | PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED | Gm13 | - | View |
Gossypium raimondii | Gorai.006G024900 | Chr06 | - | View | |
Helianthus annuus | HanXRQChr02g0056421 | Probable FACT complex subunit SSRP1 | HanXRQChr02 | + | View |
Lupinus albus | Lalb_Chr06g0175461 | K09272 - structure-specific recognition protein 1 (SSRP1) | Lalb_Chr06 | + | View |
Lupinus albus | Lalb_Chr02g0159551 | K09272 - structure-specific recognition protein 1 (SSRP1) | Lalb_Chr02 | - | View |
Lotus japonicus | Lj2g0002473 | K09272 - structure-specific recognition protein 1 (SSRP1) | chr2 | + | View |
Lonicera japonica | Lj7A400T32 | GWHAAZE00000007 | + | View | |
Lonicera japonica | Lju41A25T61 | GWHAAZE00000094 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_2_88641 | K09272 - structure-specific recognition protein 1 (SSRP1) | Lsat_1_v8_lg_2 | + | View |
Malus domestica | MD17G1047600 | high mobility group | Chr17 | - | View |
Malus domestica | MD09G1047500 | high mobility group | Chr09 | - | View |
Manihot esculenta | Manes.15G176600 | Chromosome15 | - | View | |
Nelumbo nucifera | Nn4g23059 | chr4 | - | View | |
Petunia axillaris | Peaxi162Scf00129g00539 | FACT complex subunit SSRP1 | Peaxi162Scf00129 | + | View |
Prunus persica | Prupe.3G271500 | K09272 - structure-specific recognition protein 1 (SSRP1) | Pp03 | + | View |
Papaver somniferum | PSO591G0346 | NW_020621603.1 | - | View | |
Populus trichocarpa | Potri.017G078500 | K09272 - structure-specific recognition protein 1 (SSRP1) | Chr17 | - | View |
Phaseolus vulgaris | Phvul.004G026200 | K09272 - structure-specific recognition protein 1 (SSRP1) | Chr04 | + | View |
Quercus lobata | QL02p080714 | CM012294 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0169081 | RcHm_v2.0_Chr2 | + | View | |
Striga asiatica | SGA_v2.0_scaffold205G41764 | scaffold205 | - | View | |
Salvia bowleyana | SalBow1G0468 | GWHASIU00000001 | - | View | |
Salix brachista | Sabra17G0069700 | GWHAAZH00000017 | - | View | |
Sechium edule | Sed0022026 | LG06 | - | View | |
Solanum lycopersicum | Solyc02g087680.1 | FACT complex subunit SSRP1 (AHRD V3.3 *-* A0A1U8FYB7_CAPAN) | SL4.0ch02 | - | View |
Schrenkiella parvula | Sp2g17380 | K09272 - structure-specific recognition protein 1 (SSRP1) | ch2-4 | + | View |
Solanum pennellii | Sopen02g032430 | FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle), encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC. | high mobility group (HMG) | CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein , High mobility group, superfamily , High mobility group, HMG1/HMG2 | BEST Arabidopsis thaliana protein match is: high mobility group B1 | Spenn-ch02 | - | View |
Solanum tuberosum | PGSC0003DMG400001414 | Structure-specific recognition protein | ST4.03ch02 | + | View |
Trochodendron aralioides | TAR622G1354 | group8 | + | View | |
Trochodendron aralioides | TAR371G0510 | group13 | - | View | |
Theobroma cacao | Thecc.04G075500 | High mobility group | Chromosome_4 | - | View |
Tripterygium wilfordii | TWI34G1126 | NC_052235.1 | + | View | |
Tripterygium wilfordii | TWI60G1051 | NC_052246.1 | - | View | |
Vigna mungo | VMungo0464G0737 | CM024077.1 | + | View | |
Vitis vinifera | GSVIVG01011349001 | chr14 | - | View |