Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022749 PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Vitis vinifera] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.234 chr13 + View
Acer truncatum Atru.chr5.3381 chr5 - View
Actinidia chinensis Actinidia20519 Lachesis_group25 + View
Actinidia chinensis Actinidia21467 Lachesis_group23 - View
Actinidia chinensis Actinidia00629 Lachesis_group12 + View
Arabidopsis lyrata AL1G33040 scaffold_1 - View
Avicennia marina MSTRG.27632 ScioBoG_94932_HRSCAF_95134 + View
Avicennia marina MSTRG.16922 ScioBoG_19743_HRSCAF_19834 - View
Aquilegia oxysepala Aqoxy6G02093 CHR06 + View
Arabidopsis thaliana AT1G75990 PAM domain (PCI/PINT associated module) protein PAM domain (PCI/PINT associated module) protein%3B FUNCTIONS IN: enzyme regulator activity%3B INVOLVED IN: protein catabolic process%2C ubiquitin-dependent protein catabolic process%3B LOCATED IN: proteasome complex%2C plasma membrane%2C proteasome regulatory particle%2C lid subcomplex%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717)%2C PCI/PINT associated module (InterPro:IPR013143)%2C 26S proteasome regulatory subunit%2C C-terminal (InterPro:IPR013586)%3B BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G20200.1)%3B Has 740 Blast hits to 739 proteins in 220 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 313%3B Fungi - 146%3B Plants - 168%3B Viruses - 0%3B Other Eukaryotes - 113 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719 (EMB2719)%3B FUNCTIONS IN: enzyme regulator activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%2C embryo development ending in seed dormancy%3B LOCATED IN: proteasome complex%2C plasma membrane%2C proteasome regulatory particle%2C lid subcomplex%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717)%2C PCI/PINT associated module (InterPro:IPR013143)%2C 26S proteasome regulatory subunit%2C C-terminal (InterPro:IPR013586)%3B BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G75990.1)%3B Has 763 Blast hits to 760 proteins in 218 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 312%3B Fungi - 164%3B Plants - 180%3B Viruses - 0%3B Other Eukaryotes - 107 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g47092 ChrC08 - View
Brassica carinata BcaC08g47308 ChrC08 + View
Brassica napus C07p23180 C07 + View
Brassica napus A07p41500 A07 - View
Brassica oleracea BolC7t42854H C7 + View
Brassica oleracea BolC6t40029H C6 - View
Brassica rapa BraA07t31682Z A07 - View
Capsicum annuum CAN.G588.90 PGAv.1.6.scaffold588 - View
Cannabis sativa CANSAT25G0170 NC_044370.1 + View
Corylus avellana Haze_02123 Similar to 21D7: Probable 26S proteasome non-ATPase regulatory subunit 3 (Daucus carota OX%3D4039) 1 + View
Corylus avellana Haze_22686 Similar to 21D7: Probable 26S proteasome non-ATPase regulatory subunit 3 (Nicotiana tabacum OX%3D4097) 3 - View
Coffea canephora Cc09_g09820 Probable 26S proteasome non-ATPase regulatory subunit 3 chr9 + View
Citrus clementina Ciclev10028313m.g scaffold_8 + View
Carpinus fangiana Cfa005261 Cfa02 - View
Cardamine hirsuta CARHR069530 26S proteasome regulatory subunit S3, putative Chr2 - View
Cardamine hirsuta CARHR020700 26S proteasome regulatory subunit S3, putative Chr1 - View
Carya illinoinensis CiPaw.06G120800 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Chr06 + View
Carya illinoinensis CiPaw.05G083700 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Chr05 - View
Citrullus lanatus ClCG02G003980 26S proteasome non-ATPase regulatory subunit CG_Chr02 + View
Cucumis melo MELO3C013344.2 26S proteasome non-ATPase regulatory subunit 3 chr01 + View
Carica papaya Cpa.g.sc20.101 supercontig_20 - View
Carica papaya Cpa.g.sc26.279 supercontig_26 + View
Capsella rubella Carub.0002s2288 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) scaffold_2 - View
Cucumis sativus L. CsaV3_7G001120 26S proteasome non-ATPase regulatory subunit 3 like chr7 - View
Daucus carota DCAR_022816 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv41927 GWHABJS00000002 - View
Davidia involucrata Dinv39549 GWHABJS00000011 - View
Davidia involucrata Dinv14119 GWHABJS00000005 + View
Durio zibethinus Duzib132G0164 NW_019167915.1 + View
Durio zibethinus Duzib041G0394 NW_019167826.1 + View
Durio zibethinus Duzib093G1538 NW_019167937.1 - View
Erigeron canadensis ECA233G2788 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA246G3931 Conyza_canadensis_scaffold:8 - View
Erythranthe guttata Migut.B00069 scaffold_2 + View
Eutrema salsugineum Thhalv10007479m.g K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) scaffold_5 + View
Eutrema salsugineum Thhalv10018459m.g K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) scaffold_9 + View
Fragaria x ananassa FAN20G1830 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Fvb2-3 + View
Fragaria x ananassa FAN27G2652 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Fvb2-1 - View
Fragaria x ananassa FAN15G1028 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Fvb2-4 - View
Fragaria x ananassa FAN24G2429 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Fvb2-2 + View
Fragaria vesca FvH4_2g15510 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Fvb2 - View
Gossypium hirsutum Gohir.D12G035700 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) D12 - View
Gossypium hirsutum Gohir.A12G036700 PTHR10758//PTHR10758:SF3 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.A03G205550 PTHR10758//PTHR10758:SF3 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 // SUBFAMILY NOT NAMED A03 - View
Gossypium hirsutum Gohir.D01G160800 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) D01 - View
Gossypium hirsutum Gohir.A01G169700 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) A01 - View
Gossypium raimondii Gorai.008G037000 Chr08 - View
Gossypium raimondii Gorai.002G199200 Chr02 - View
Hydrangea macrophylla Hma1.2p1_0032F.1_g019290 Hma1.2p1_0032F.1 + View
Hydrangea macrophylla Hma1.2p1_0163F.1_g072580 Hma1.2p1_0163F.1 - View
Lonicera japonica Lj5C177G7 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_8_123101 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_3_47581 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Lsat_1_v8_lg_3 + View
Malus domestica MD08G1008900 PAM domain (PCI/PINT associated module) protein Chr08 + View
Malus domestica MD05G1123400 PAM domain (PCI/PINT associated module) protein Chr05 - View
Malus domestica MD10G1126400 PAM domain (PCI/PINT associated module) protein Chr10 - View
Manihot esculenta Manes.04G071700 Chromosome04 + View
Manihot esculenta Manes.11G097100 Chromosome11 - View
Nelumbo nucifera Nn5g30817 chr5 - View
Nicotiana tabacum Nitab4.5_0000283g0490 PCI/PINT associated module, 26S proteasome regulatory subunit, C-terminal, Winged helix-turn-helix DNA-binding domain, Proteasome component (PCI) domain Nitab4.5_0000283 - View
Nicotiana tabacum Nitab4.5_0000079g0260 26S proteasome regulatory subunit, C-terminal, Proteasome component (PCI) domain, Winged helix-turn-helix DNA-binding domain, PCI/PINT associated module Nitab4.5_0000079 + View
Nicotiana tabacum Nitab4.5_0003698g0050 PCI/PINT associated module, Proteasome component (PCI) domain, 26S proteasome regulatory subunit, C-terminal, Winged helix-turn-helix DNA-binding domain Nitab4.5_0003698 + View
Oryza sativa ssp. japonica Os09g0541900 Similar to 26S proteasome subunit RPN3a. Similar to cDNA clone:J023145D07, full insert sequence. chr09 - View
Petunia axillaris Peaxi162Scf00362g00546 26S proteasome non-ATPase regulatory subunit 3 homolog A Peaxi162Scf00362 + View
Prunus persica Prupe.1G360600 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Pp01 + View
Prunus persica Prupe.8G167300 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Pp08 - View
Papaver somniferum PSO541G6303 NC_039363.1 - View
Papaver somniferum PSO675G5151 NC_039358.1 - View
Populus trichocarpa Potri.004G176600 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Chr04 - View
Populus trichocarpa Potri.002G017700 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Chr02 + View
Populus trichocarpa Potri.009G136900 K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3) Chr09 - View
Quercus lobata QL02p012612 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0278511 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim05G0053900 chr05 + View
Rhododendron simsii Rhsim11G0192900 chr11 - View
Striga asiatica SGA_v2.0_scaffold32G13291 scaffold32 - View
Striga asiatica SGA_v2.0_scaffold80G25836 scaffold80 + View
Salvia bowleyana SalBow5G5506 GWHASIU00000003 - View
Salvia bowleyana SalBow5G3315 GWHASIU00000003 + View
Salvia bowleyana SalBow1G6245 GWHASIU00000001 + View
Salix brachista Sabra02G0014100 GWHAAZH00000002 + View
Salix brachista Sabra09G0106400 GWHAAZH00000009 - View
Salix brachista Sabra04G0118600 GWHAAZH00000004 - View
Sechium edule Sed0027800 LG05 - View
Sapria himalayana SHI05761 scaffold8_16897533 - View
Solanum lycopersicum Solyc01g111700.2 26S proteasome non-ATPase regulatory subunit 3 (AHRD V3.3 *** B6TAE2_MAIZE) SL4.0ch01 - View
Solanum pennellii Sopen01g053740 Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco), EMBRYO DEFECTIVE 2719 (EMB2719) | FUNCTIONS IN: enzyme regulator activity | INVOLVED IN: ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy | LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain , PCI/PINT associated module , 26S proteasome regulatory subunit, C-terminal | BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG402006167 26S proteasome regulatory subunit S3 ST4.03ch01 - View
Selenicereus undatus Hund01700 Scaffold_33678 - View
Trochodendron aralioides TAR376G0703 group14 - View
Trochodendron aralioides TAR628G1735 group5 - View
Trochodendron aralioides TAR381G0159 group11 + View
Theobroma cacao Thecc.02G057700 PAM domain (PCI/PINT associated module) protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104811436 26S proteasome non-ATPase regulatory subunit 3 homolog A NW_010965372.1 - View
Tripterygium wilfordii TWI79G1042 NC_052238.1 + View
Tripterygium wilfordii TWI75G0288 NC_052253.1 + View
Tripterygium wilfordii TWI31G1068 NC_052233.1 + View
Vaccinium macrocarpon vmacro02283 Similar to 21D7: Probable 26S proteasome non-ATPase regulatory subunit 3 (Nicotiana tabacum OX%3D4097) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17316 Similar to 21D7: Probable 26S proteasome non-ATPase regulatory subunit 3 (Nicotiana tabacum OX%3D4097) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01024003001 chr3 - View
Vitis vinifera GSVIVG01008761001 chr18 + View