Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014171 unnamed protein product [Coffea canephora] Chr1 - View
CSS0030238 RING/U-box superfamily protein, putative [Theobroma cacao] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.1222 chr6 + View
Acer truncatum Atru.chr3.1337 chr3 - View
Acer truncatum Atru.chr13.1110 chr13 - View
Actinidia chinensis Actinidia01863 Lachesis_group11 - View
Avicennia marina MSTRG.3753 ScioBoG_102836_HRSCAF_103072 - View
Amaranthus hybridus Ah.05g169580 RING-H2 finger protein ATL54 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL54) AmaHy_arrow1_Scaffold_5 - View
Aquilegia oxysepala Aqoxy6G00699 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3ZX127 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DABQ5X K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) arahy.Tifrunner.gnm1.Arahy.15 + View
Beta vulgaris EL10Ac1g01133 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr1_EL10_PGA_scaffold3 - View
Beta vulgaris EL10Ac6g14811 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT11G1436 NC_044377.1 + View
Cannabis sativa CANSAT01G0420 NC_044373.1 + View
Cicer arietinum L. Ca_05325_v3 Ca_LG2_v3 + View
Coffea canephora Cc07_g14510 Putative uncharacterized protein chr7 - View
Coffea canephora Cc10_g06590 Ring finger protein, putative chr10 - View
Coffea canephora Cc02_g21130 Putative RING-H2 finger protein ATL52 chr2 - View
Citrus clementina Ciclev10025698m.g scaffold_7 - View
Citrus clementina Ciclev10001098m.g scaffold_5 - View
Ceratophyllum demersum CDE06G2580 4 + View
Carpinus fangiana Cfa017903 Cfa07 + View
Carya illinoinensis CiPaw.15G044900 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Chr15 - View
Carya illinoinensis CiPaw.12G064700 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Chr12 + View
Carya illinoinensis CiPaw.11G094700 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Chr11 + View
Citrullus lanatus ClCG01G018570 Ring finger protein, putative CG_Chr01 - View
Citrullus lanatus ClCG08G011350 Ring finger protein, putative CG_Chr08 + View
Cucumis melo MELO3C007735.2 E3 ubiquitin-protein ligase RING1 chr08 - View
Cucumis melo MELO3C011051.2 RING-H2 finger protein ATL54-like chr03 - View
Corchorus olitorius COL.COLO4_11991 Zinc finger%2C RING-type AWUE01014793.1 - View
Carica papaya Cpa.g.sc36.190 supercontig_36 + View
Carica papaya Cpa.g.sc55.65 supercontig_55 - View
Chenopodium quinoa AUR62027822 ATL54: RING-H2 finger protein ATL54 C_Quinoa_Scaffold_3784 + View
Chenopodium quinoa AUR62027198 ATL54: RING-H2 finger protein ATL54 C_Quinoa_Scaffold_2924 - View
Chenopodium quinoa AUR62018981 ATL54: RING-H2 finger protein ATL54 C_Quinoa_Scaffold_3876 + View
Cucumis sativus L. CsaV3_2G029930 RING-H2 finger protein ATL54-like chr2 + View
Cucumis sativus L. CsaV3_6G045220 RING-H2 finger protein chr6 - View
Daucus carota DCAR_012877 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_008255 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv13240 GWHABJS00000014 - View
Davidia involucrata Dinv44812 GWHABJS00000002 + View
Davidia involucrata Dinv08872 GWHABJS00000021 - View
Durio zibethinus Duzib093G1162 NW_019167937.1 + View
Durio zibethinus Duzib041G0657 NW_019167826.1 - View
Erigeron canadensis ECA247G2591 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.F00383 Chr06 - View
Eucalyptus grandis Eucgr.B00047 Chr06 - View
Erythranthe guttata Migut.L00164 scaffold_12 + View
Fragaria x ananassa FAN04G3046 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb5-4 - View
Fragaria x ananassa FAN26G2743 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Fvb1-2 - View
Fragaria x ananassa FAN18G3121 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb5-1 - View
Fragaria x ananassa FAN13G1247 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb5-2 - View
Fragaria x ananassa FAN23G1114 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Fvb1-3 - View
Fragaria x ananassa FAN28G1256 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Fvb1-1 + View
Fragaria x ananassa FAN19G0666 PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-4 - View
Fragaria vesca FvH4_5g36252 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb5 - View
Fragaria vesca FvH4_1g20164 PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1 - View
Gossypium hirsutum Gohir.A05G222900 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A05 - View
Gossypium hirsutum Gohir.D05G225600 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D05 - View
Glycine max Glyma.02G210400 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm02 + View
Glycine max Glyma.13G092000 PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED Gm13 + View
Glycine max Glyma.14G177900 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm14 + View
Gossypium raimondii Gorai.008G091200 Chr08 + View
Gossypium raimondii Gorai.009G233100 Chr09 - View
Lupinus albus Lalb_Chr05g0215961 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Lalb_Chr05 - View
Lupinus albus Lalb_Chr17g0344321 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr17 + View
Lupinus albus Lalb_Chr10g0102551 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr10 + View
Lotus japonicus Lj6g0002125 PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr6 - View
Lotus japonicus Lj1g0000826 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr1 + View
Lonicera japonica Lj4P279T8 GWHAAZE00000004 - View
Lonicera japonica Lj4A729T42 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_1_2761 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_9_73540 Lsat_1_v8_lg_9 + View
Magnolia biondii MBI06_g03313_MAGBIO AED:0.03 Chr06 + View
Magnolia biondii MBI02_g20472_MAGBIO AED:0.22 Chr02 + View
Malus domestica MD01G1036900 RING/U-box superfamily protein Chr01 + View
Malus domestica MD15G1317400 RING/U-box superfamily protein Chr15 - View
Malus domestica MD15G1377700 RING/U-box superfamily protein Chr15 + View
Malus domestica MD08G1190400 RING/U-box superfamily protein Chr08 + View
Manihot esculenta Manes.12G129600 Chromosome12 - View
Manihot esculenta Manes.02G148600 Chromosome02 - View
Manihot esculenta Manes.07G037700 Chromosome07 + View
Medicago truncatula Medtr5g064890 RING-H2 zinc finger protein chr5 + View
Nelumbo nucifera Nn1g05473 chr1 + View
Nelumbo nucifera Nn5g29979 chr5 - View
Olea europaea Oeu032370.1 chr20 + View
Olea europaea Oeu000876.1 chr10 + View
Oryza sativa ssp. japonica Os09g0468800 Similar to RING-H2 finger protein ATL5F. chr09 - View
Petunia axillaris Peaxi162Scf00160g00117 RING/U-box superfamily protein Peaxi162Scf00160 - View
Petunia axillaris Peaxi162Scf00139g00031 RING/U-box superfamily protein Peaxi162Scf00139 + View
Punica granatum PGR031G1317 NC_045127.1 + View
Punica granatum PGR042G3767 NC_045130.1 + View
Prunus persica Prupe.1G524400 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Pp01 + View
Prunus persica Prupe.8G066400 Pp08 + View
Prunus persica Prupe.6G194300 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Pp06 + View
Populus trichocarpa Potri.003G093100 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Chr03 + View
Populus trichocarpa Potri.017G049300 PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr17 - View
Populus trichocarpa Potri.002G101800 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 + View
Populus trichocarpa Potri.007G097500 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Chr07 + View
Populus trichocarpa Potri.005G071300 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Chr05 - View
Phaseolus vulgaris Phvul.008G177400 PTHR14155//PTHR14155:SF174 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr08 + View
Phaseolus vulgaris Phvul.006G203900 PTHR14155//PTHR14155:SF101 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr06 - View
Quercus lobata QL11p023242 11 + View
Quercus lobata QL02p002217 CM012294 - View
Quercus lobata QL06p047938 6 - View
Rosa chinensis RcHm_v2.0_Chr7g0238151 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr2g0112241 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0076900 chr06 - View
Rhododendron simsii Rhsim10G0169000 chr10 + View
Salix brachista Sabra07G0080800 GWHAAZH00000007 + View
Salix brachista Sabra02G0079800 GWHAAZH00000002 + View
Salix brachista Sabra05G0058300 GWHAAZH00000005 - View
Salix brachista Sabra17G0036500 GWHAAZH00000017 - View
Salix brachista Sabra07G0091700 GWHAAZH00000007 + View
Simmondsia chinensis Sc23g0000470 GWHAASQ00000023 + View
Simmondsia chinensis Sc16g0000330 GWHAASQ00000016 + View
Sechium edule Sed0020452 LG14 + View
Sechium edule Sed0004276 LG04 + View
Solanum lycopersicum Solyc11g010330.3 RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH) SL4.0ch11 + View
Solanum lycopersicum Solyc12g087840.1 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LC40_ARTAN) SL4.0ch12 + View
Solanum lycopersicum Solyc04g074790.3 RING/U-box superfamily protein (AHRD V3.3 *-* F4JJ02_ARATH) SL4.0ch04 + View
Solanum pennellii Sopen12g029870 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: inflorescence meristem, root, flower | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch12 + View
Solanum pennellii Sopen04g029750 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: inflorescence meristem, root, flower | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch04 + View
Solanum pennellii Sopen11g005110 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400016217 Ring finger protein ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400012570 Ring finger protein ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400030821 Ring finger protein ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400017761 Ring finger protein ST4.03ch12 + View
Trochodendron aralioides TAR381G1377 group11 - View
Trochodendron aralioides TAR625G0609 group4 + View
Trochodendron aralioides TAR628G0774 group5 + View
Trochodendron aralioides TAR376G0764 group14 + View
Theobroma cacao Thecc.01G094900 RING/U-box superfamily protein Chromosome_1 - View
Theobroma cacao Thecc.08G100700 RING/U-box superfamily protein Chromosome_8 - View
Theobroma cacao Thecc.02G133000 RING/U-box superfamily protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104800138 RING-H2 finger protein ATL54 NW_010969032.1 - View
Tripterygium wilfordii TWI53G0251 NC_052244.1 + View
Tripterygium wilfordii TWI56G0488 NC_052242.1 - View
Tripterygium wilfordii TWI12G1335 NC_052243.1 + View
Tripterygium wilfordii TWI74G1689 NC_052234.1 - View
Vaccinium macrocarpon vmacro21928 Similar to ATL54: RING-H2 finger protein ATL54 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G2560 CM024073.1 - View
Vanilla planifolia HPP92_016763 RING/U-box superfamily protein *-* CM028157.1 - View
Vitis vinifera GSVIVG01009096001 chr18 + View
Zea mays Zm00001eb101200 Zm00001e009990 RING-H2 finger protein ATL5F RING-H2 finger protein ATL54 2 - View
Zea mays Zm00001eb109400 Zm00001e010787 RING-H2 finger protein ATL3 2 - View
Zea mays Zm00001eb315620 Zm00001e034423 RING-H2 finger protein ATL5F 7 - View
Zea mays Zm00001eb327570 Zm00001e035560 Ring-H2 zinc finger protein RING-H2 finger protein ATL3 7 - View