Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042225 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Pyrus x bretschneideri] Contig404 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G14760 LG-3 + View
Acer truncatum Atru.chr3.2710 chr3 - View
Actinidia chinensis Actinidia06344 Lachesis_group15 + View
Actinidia chinensis Actinidia16336 Lachesis_group24 + View
Actinidia chinensis Actinidia23975 Lachesis_group9 - View
Arabidopsis lyrata AL6G23390 scaffold_6 - View
Avicennia marina MSTRG.12467 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.19876 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.21375 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.18429 ScioBoG_22153_HRSCAF_22259 + View
Amaranthus hybridus Ah.04g151830 Nuclear transcription factor Y subunit A-4 (AtNF-YA-4) AmaHy_arrow1_Scaffold_4 - View
Amaranthus hybridus Ah.06g194150 Nuclear transcription factor Y subunit A-9 (AtNF-YA-9) AmaHy_arrow1_Scaffold_6 - View
Arabidopsis thaliana AT3G20910 nuclear factor Y, subunit A9 nuclear factor Y%2C subunit A9 (NF-YA9)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C specific transcriptional repressor activity%3B INVOLVED IN: negative regulation of gene-specific transcription%2C regulation of transcription%2C DNA-dependent%3B LOCATED IN: CCAAT-binding factor complex%2C nucleus%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor%2C subunit B (InterPro:IPR001289)%2C CCAAT-binding factor%2C conserved site (InterPro:IPR018362)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit A1 (TAIR:AT5G12840.4)%3B Has 696 Blast hits to 696 proteins in 160 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 146%3B Fungi - 142%3B Plants - 380%3B Viruses - 0%3B Other Eukaryotes - 28 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G12840 nuclear factor Y, subunit A1 Encodes a subunit of CCAAT-binding complex%2C binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A%2C HAP2B%2C HAP2C)%2C it is expressed in vegetative and reproductive tissues. nuclear factor Y%2C subunit A1 (NF-YA1)%3B CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor%2C subunit B (InterPro:IPR001289)%2C CCAAT-binding factor%2C conserved site (InterPro:IPR018362)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit A9 (TAIR:AT3G20910.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). nuclear factor Y%2C subunit A1 (NF-YA1)%3B CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor%2C subunit B (InterPro:IPR001289)%2C CCAAT-binding factor%2C conserved site (InterPro:IPR018362)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit A9 (TAIR:AT3G20910.1)%3B Has 687 Blast hits to 687 proteins in 162 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 144%3B Fungi - 133%3B Plants - 381%3B Viruses - 0%3B Other Eukaryotes - 29 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB06g26166 ChrB06 + View
Brassica carinata BcaC04g19177 ChrC04 + View
Brassica oleracea BolC9t59270H C9 + View
Brassica rapa BraA03t13350Z A03 + View
Brassica rapa BraA10t44594Z A10 + View
Beta vulgaris EL10Ac4g10245 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Chr4_EL10_PGA_scaffold1 - View
Beta vulgaris EL10Ac2g04334 PTHR12632//PTHR12632:SF15 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 + View
Corylus avellana Haze_19897 Similar to NFYA1: Nuclear transcription factor Y subunit A-1 (Arabidopsis thaliana OX%3D3702) 10 - View
Corylus avellana Haze_23142 Similar to NFYA1: Nuclear transcription factor Y subunit A-1 (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_03201 Similar to NFYA1: Nuclear transcription factor Y subunit A-1 (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10005144m.g scaffold_9 - View
Citrus clementina Ciclev10015808m.g scaffold_2 + View
Ceratophyllum demersum CDE06G0388 4 + View
Cardamine hirsuta CARHR200610 Nuclear transcription factor Y subunit A-1, putative Chr6 + View
Carya illinoinensis CiPaw.13G160600 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Chr13 - View
Carya illinoinensis CiPaw.14G118700 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Chr14 - View
Carya illinoinensis CiPaw.10G031800 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Chr10 + View
Citrullus lanatus ClCG03G013220 Nuclear transcription factor Y subunit A-1, putative CG_Chr03 - View
Citrullus lanatus ClCG02G023180 Nuclear transcription factor Y subunit A5 CG_Chr02 - View
Cucumis melo MELO3C015196.2 Nuclear transcription factor Y subunit A-1 chr02 - View
Cucumis melo MELO3C014590.2 Nuclear transcription factor Y subunit A-1-like protein chr05 + View
Carica papaya Cpa.g.sc84.49 supercontig_84 - View
Chenopodium quinoa AUR62000125 NFYA9: Nuclear transcription factor Y subunit A-9 C_Quinoa_Scaffold_2088 + View
Chenopodium quinoa AUR62019306 NFYA9: Nuclear transcription factor Y subunit A-9 C_Quinoa_Scaffold_3107 + View
Capsella rubella Carub.0006s1103 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED scaffold_6 - View
Capsella rubella Carub.0003s2089 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_1G042800 Nuclear transcription factor Y subunit A chr1 - View
Cucumis sativus L. CsaV3_6G039350 Nuclear transcription factor Y subunit A chr6 - View
Daucus carota DCAR_002074 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv22175 GWHABJS00000003 + View
Davidia involucrata Dinv43440 GWHABJS00000016 - View
Davidia involucrata Dinv18067 GWHABJS00000015 + View
Davidia involucrata Dinv09351 GWHABJS00000020 - View
Durio zibethinus Duzib150G0130 NW_019167882.1 - View
Durio zibethinus Duzib138G1104 NW_019167893.1 + View
Durio zibethinus Duzib168G0819 NW_019168159.1 - View
Durio zibethinus Duzib133G0283 NW_019167938.1 + View
Erigeron canadensis ECA238G1010 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA233G1418 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.J00764 Chr10 + View
Eucalyptus grandis Eucgr.A02381 Chr01 - View
Erythranthe guttata Migut.N02320 scaffold_14 + View
Erythranthe guttata Migut.D00604 scaffold_4 + View
Eutrema salsugineum Thhalv10014364m.g PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED scaffold_2 - View
Eutrema salsugineum Thhalv10021240m.g PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED scaffold_13 - View
Fragaria x ananassa FAN11G2485 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Fvb3-4 + View
Fragaria x ananassa FAN16G2500 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Fvb3-3 - View
Fragaria x ananassa FAN21G0818 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Fvb3-2 - View
Fragaria vesca FvH4_3g28780 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Fvb3 - View
Gossypium hirsutum Gohir.A13G216700 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED A13 + View
Gossypium hirsutum Gohir.D13G220300 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED D13 + View
Gossypium hirsutum Gohir.D08G165100 PTHR12632//PTHR12632:SF15 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // SUBFAMILY NOT NAMED D08 - View
Gossypium hirsutum Gohir.A08G144100 PTHR12632//PTHR12632:SF15 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // SUBFAMILY NOT NAMED A08 - View
Glycine max Glyma.18G071000 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Gm18 + View
Glycine max Glyma.08G335900 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Gm08 + View
Gossypium raimondii Gorai.004G172100 Chr04 - View
Gossypium raimondii Gorai.013G251200 Chr13 + View
Lupinus albus Lalb_Chr15g0082541 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Lalb_Chr15 - View
Lotus japonicus Lj6g0002522 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED chr6 + View
Lactuca sativa Lsat_1_v5_gn_6_47121 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_2_97800 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI04_g36078_MAGBIO AED:0.11 Chr04 - View
Malus domestica MD11G1192400 nuclear factor Y Chr11 - View
Malus domestica MD03G1174600 nuclear factor Y Chr03 - View
Manihot esculenta Manes.06G163900 Chromosome06 - View
Manihot esculenta Manes.07G006600 Chromosome07 + View
Manihot esculenta Manes.09G025200 Chromosome09 - View
Manihot esculenta Manes.14G003100 Chromosome14 + View
Nelumbo nucifera Nn2g15356 chr2 - View
Nelumbo nucifera Nn7g36222 chr7 + View
Nicotiana tabacum Nitab4.5_0002741g0160 CCAAT-binding transcription factor, subunit B Nitab4.5_0002741 - View
Nicotiana tabacum Nitab4.5_0000023g0710 CCAAT-binding factor, conserved site, CCAAT-binding transcription factor, subunit B Nitab4.5_0000023 - View
Olea europaea Oeu025871.1 chr16 + View
Olea europaea Oeu016681.2 chr11 - View
Olea europaea Oeu063324.1 scaffold936 + View
Petunia axillaris Peaxi162Scf00004g02521 Nuclear transcription factor Y subunit A-1 Peaxi162Scf00004 + View
Punica granatum PGR119G0208 NC_045132.1 + View
Prunus persica Prupe.4G249900 Pp04 + View
Populus trichocarpa Potri.006G053500 PTHR12632//PTHR12632:SF15 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // SUBFAMILY NOT NAMED Chr06 - View
Populus trichocarpa Potri.001G257600 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Chr01 - View
Populus trichocarpa Potri.009G052900 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Chr09 - View
Phaseolus vulgaris Phvul.006G062200 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Chr06 - View
Quercus lobata QL01p004648 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0052231 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim01G0192000 chr01 + View
Rhododendron simsii Rhsim13G0220900 chr13 - View
Striga asiatica SGA_v2.0_scaffold247G44882 scaffold247 + View
Striga asiatica SGA_v2.0_scaffold3G01499 scaffold3 - View
Salvia bowleyana SalBow6G6188 GWHASIU00000002 - View
Salix brachista Sabra09G0038600 GWHAAZH00000009 - View
Salix brachista Sabra06G0037900 GWHAAZH00000006 - View
Simmondsia chinensis Sc09g0000740 GWHAASQ00000009 + View
Sechium edule Sed0015811 LG12 - View
Sechium edule Sed0019798 LG05 + View
Sapria himalayana SHI29789 scaffold68_2605431 + View
Solanum lycopersicum Solyc11g065700.2 Nuclear transcription factor Y subunit A-9 (AHRD V3.3 *** A0A2G2YFZ7_CAPAN) SL4.0ch11 - View
Schrenkiella parvula Sp3g18940 PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED ch3-1 + View
Schrenkiella parvula Sp6g31110 PTHR12632:SF14 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED ch6-6 + View
Solanum pennellii Sopen11g025440 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. | nuclear factor Y, subunit A1 (NF-YA1) | CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B , CCAAT-binding factor, conserved site | BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400007350 YA4 ST4.03ch11 - View
Selenicereus undatus Hund07505 Scaffold_33676 - View
Selenicereus undatus Hund22028 Scaffold_33680 - View
Selenicereus undatus Hund19161 Scaffold_33673 - View
Selenicereus undatus Hund24727 Scaffold_3410 - View
Trochodendron aralioides TAR623G1120 group7 - View
Trochodendron aralioides TAR369G0774 group18 + View
Trochodendron aralioides TAR633G2356 group2 + View
Theobroma cacao Thecc.09G234400 Nuclear transcription factor Y subunit A-9 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104811169 nuclear transcription factor Y subunit A-1-like NW_010965304.1 + View
Tarenaya hassleriana THA.LOC104799107 nuclear transcription factor Y subunit A-1-like NW_010968505.1 + View
Tripterygium wilfordii TWI34G1873 NC_052235.1 - View
Tripterygium wilfordii TWI60G0977 NC_052246.1 + View
Vaccinium macrocarpon vmacro04154 Similar to NFYA9: Nuclear transcription factor Y subunit A-9 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G2022 CM024075.1 + View
Vitis vinifera GSVIVG01033313001 chr8 + View
Vitis vinifera GSVIVG01025252001 chr6 + View