Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0017870 PREDICTED: protein vip1-like [Fragaria vesca subsp. vesca] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.1830 chr11 + View
Arabidopsis lyrata AL3G11030 scaffold_3 - View
Avicennia marina MSTRG.7816 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.23949 ScioBoG_3895_HRSCAF_3912 + View
Amaranthus hybridus Ah.10g031390 AmaHy_arrow1_Scaffold_10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D3DSYK PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4P7T15 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT3G01210 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: oxidoreductase activity%2C nucleic acid binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G14340.1)%3B Has 327 Blast hits to 327 proteins in 73 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 84%3B Plants - 228%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0564G409 AmTr_v1.0_scaffold00010 - View
Beta vulgaris EL10Ac2g02960 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr2_EL10_PGA_scaffold6 - View
Cannabis sativa CANSAT64G2751 NC_044379.1 + View
Corylus avellana Haze_14556 Similar to BPA1: Binding partner of ACD11 1 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_12033 Similar to BPA1: Binding partner of ACD11 1 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g13280 RNA-binding (RRM/RBD/RNP motifs) family protein chr11 + View
Coffea canephora Cc07_g03230 RNA-binding (RRM/RBD/RNP motifs) family protein chr7 - View
Citrus clementina Ciclev10032573m.g scaffold_4 - View
Citrus clementina Ciclev10012602m.g scaffold_6 + View
Carpinus fangiana Cfa007532 Cfa03 - View
Carpinus fangiana Cfa009004 Cfa03 + View
Cardamine hirsuta CARHR075830 RNA recognition motif-containing protein Chr3 - View
Carya illinoinensis CiPaw.05G137700 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr05 + View
Carya illinoinensis CiPaw.04G018300 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr04 + View
Carya illinoinensis CiPaw.03G028600 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr03 + View
Citrullus lanatus ClCG05G024440 RNA recognition motif containing protein CG_Chr05 + View
Citrullus lanatus ClCG09G018340 RNA recognition motif-containing family protein CG_Chr09 + View
Cucumis melo MELO3C021980.2 binding partner of ACD11 1 chr09 + View
Cucumis melo MELO3C012080.2 binding partner of ACD11 1 chr10 + View
Carica papaya Cpa.g.sc14.16 supercontig_14 + View
Cucumis sativus L. CsaV3_5G032520 binding partner of ACD11 1 chr5 - View
Cucumis sativus L. CsaV3_5G037940 binding partner of ACD11 1-like chr5 - View
Daucus carota DCAR_007142 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv33743 GWHABJS00000014 - View
Durio zibethinus Duzib147G1223 NW_019168470.1 + View
Durio zibethinus Duzib264G0090 NW_019167960.1 - View
Durio zibethinus Duzib251G0013 NW_019167971.1 + View
Erythranthe guttata Migut.L01317 scaffold_12 + View
Erythranthe guttata Migut.H00908 scaffold_8 - View
Eutrema salsugineum Thhalv10021386m.g PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) scaffold_13 + View
Fragaria x ananassa FAN09G3241 PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Fvb6-2 - View
Fragaria x ananassa FAN14G4383 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6-1 - View
Fragaria x ananassa FAN22G1453 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4-1 + View
Fragaria x ananassa FAN17G1148 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4-2 - View
Fragaria x ananassa FAN02G0908 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6-4 + View
Fragaria x ananassa FAN05G4881 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6-3 - View
Fragaria vesca FvH4_4g31610 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4 + View
Fragaria vesca FvH4_6g48980 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6 + View
Gossypium hirsutum Gohir.A09G019200 PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) A09 + View
Glycine max Glyma.18G258600 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Gm18 - View
Glycine max Glyma.02G019000 PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Gm02 + View
Glycine max Glyma.09G239200 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Gm09 + View
Gossypium raimondii Gorai.006G021900 Chr06 + View
Lotus japonicus Lj2g0018612 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) chr2 - View
Lotus japonicus Lj1g0009798 PF14259 - RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) chr1 + View
Lonicera japonica Lj7A397T30 GWHAAZE00000007 + View
Malus domestica MD17G1049200 RNA-binding (RRM/RBD/RNP motifs) family protein Chr17 - View
Malus domestica MD16G1075800 RNA-binding (RRM/RBD/RNP motifs) family protein Chr16 + View
Malus domestica MD13G1074500 RNA-binding (RRM/RBD/RNP motifs) family protein Chr13 + View
Malus domestica MD09G1049200 RNA-binding (RRM/RBD/RNP motifs) family protein Chr09 - View
Manihot esculenta Manes.15G177100 Chromosome15 + View
Manihot esculenta Manes.01G187800 Chromosome01 + View
Manihot esculenta Manes.05G099033 Chromosome05 - View
Medicago truncatula Medtr7g010100 RNA recognition motif, a.k.a. RRM, RBD protein chr7 - View
Nelumbo nucifera Nn4g23095 chr4 - View
Prunus persica Prupe.1G271600 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Pp01 - View
Prunus persica Prupe.3G269600 Pp03 + View
Papaver somniferum PSO478G3055 NC_039361.1 + View
Papaver somniferum PSO017G1771 NC_039362.1 - View
Populus trichocarpa Potri.017G081400 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr17 + View
Phaseolus vulgaris Phvul.008G041900 Chr08 + View
Quercus lobata QL02p081468 CM012294 - View
Quercus lobata QL03p064856 3 + View
Rosa chinensis RcHm_v2.0_Chr2g0168821 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr4g0440121 RcHm_v2.0_Chr4 + View
Salvia bowleyana SalBow8G1497 GWHASIU00000004 - View
Salvia bowleyana SalBow1G4234 GWHASIU00000001 - View
Simmondsia chinensis Sc11g0007020 GWHAASQ00000011 - View
Sechium edule Sed0004959 LG06 + View
Sechium edule Sed0026338 LG03 - View
Solanum lycopersicum Solyc02g067390.3 Binding partner of ACD11 1 (AHRD V3.3 *** A0A199VQH5_ANACO) SL4.0ch02 + View
Solanum lycopersicum Solyc05g007200.4 binding partner of ACD11 1 (AHRD V3.3 *** A0A1U8EM00_CAPAN) SL4.0ch05 - View
Solanum pennellii Sopen02g016530 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding | INVOLVED IN: oxidation reduction | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aldo/keto reductase , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400025609 RNA recognition motif containing protein ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400006894 Nucleic acid binding protein ST4.03ch02 + View
Selenicereus undatus Hund13224 Scaffold_33679 + View
Trochodendron aralioides TAR622G1301 group8 - View
Trochodendron aralioides TAR371G0862 group13 - View
Theobroma cacao Thecc.04G078700 Uncharacterized protein Chromosome_4 - View
Tripterygium wilfordii TWI60G1363 NC_052246.1 - View
Vaccinium macrocarpon vmacro05717 Similar to BPA1: Binding partner of ACD11 1 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011379001 chr14 - View
Vitis vinifera GSVIVG01020030001 chr1 - View