Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049441 hypothetical protein VITISV_019443 [Vitis vinifera] Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.2014 chr8 - View
Actinidia chinensis Actinidia05326 Lachesis_group20 - View
Arabidopsis lyrata AL4G34600 scaffold_4 - View
Avicennia marina MSTRG.19072 ScioBoG_25048_HRSCAF_25167 + View
Aquilegia oxysepala Aqoxy1G00876 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SHW8SI PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT2G37678 far-red elongated hypocotyl 1 Positive regulator of photomorphogenesis in far-red light. Most abundant in young seedlings in the dark. Downregulated in the light and older as plants develop. Localized in the nucleus and the cytoplasm. Nuclear localization strongest in the dark. Degraded through the 26S proteasome. Regulated by PHYA. It is specifically required for the light-regulated nuclear accumulation of phyA but not phyB. far-red elongated hypocotyl 1 (FHY1)%3B FUNCTIONS IN: transcription regulator activity%3B INVOLVED IN: maintenance of protein location in nucleus%2C response to red or far red light%2C response to far red light%2C photomorphogenesis%3B LOCATED IN: nuclear body%2C nucleus%2C cytoplasm%3B EXPRESSED IN: hypocotyl%3B BEST Arabidopsis thaliana protein match is: far-red-elongated hypocotyl1-like (TAIR:AT5G02200.2)%3B Has 30 Blast hits to 30 proteins in 8 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 30%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0559G120 AmTr_v1.0_scaffold00012 - View
Brassica carinata BcaC02g11890 ChrC02 - View
Brassica carinata BcaB02g09262 ChrB02 + View
Brassica napus A04p28870 A04 - View
Brassica napus C04p10260 C04 + View
Brassica napus C04p66130 C04 - View
Brassica napus A05p08290 A05 + View
Brassica oleracea BolC4t22624H C4 + View
Brassica oleracea BolC4t28116H C4 - View
Beta vulgaris EL10As1g23111 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Scaffold_0001 - View
Cannabis sativa CANSAT35G1431 NC_044378.1 - View
Corylus avellana Haze_20829 Similar to LECRK59: L-type lectin-domain containing receptor kinase V.9 (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g02320 Putative Uncharacterized protein C17orf39 homolog chr6 + View
Citrus clementina Ciclev10012735m.g scaffold_6 - View
Cardamine hirsuta CARHR131860 Vesicle-mediated transport protein Vid24 Chr4 + View
Carya illinoinensis CiPaw.09G195900 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Chr09 - View
Citrullus lanatus ClCG04G008030 Glucose-induced degradation protein 4 homolog CG_Chr04 + View
Capsella rubella Carub.0004s1962 PTHR37723:SF2 - FHY1-3 scaffold_4 - View
Cucumis sativus L. CsaV3_4G025180 glucose-induced degradation protein 4 homolog chr4 - View
Daucus carota DCAR_012114 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv37147 GWHABJS00000021 - View
Davidia involucrata Dinv35573 GWHABJS00000015 + View
Durio zibethinus Duzib093G0721 NW_019167937.1 - View
Durio zibethinus Duzib128G0467 NW_019168481.1 - View
Erigeron canadensis ECA248G2752 Conyza_canadensis_scaffold:9 + View
Erythranthe guttata Migut.J00304 scaffold_10 + View
Eutrema salsugineum Thhalv10017273m.g PTHR37723:SF2 - FHY1-3 scaffold_10 - View
Fragaria x ananassa FAN05G0090 K18813 - cyclin D7, plant (CYCD7) Fvb6-3 - View
Fragaria x ananassa FAN02G2927 KOG4635 - Vacuolar import and degradation protein Fvb6-4 + View
Fragaria x ananassa FAN14G1919 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Fvb6-1 - View
Fragaria vesca FvH4_6g13220 KOG4635 - Vacuolar import and degradation protein Fvb6 + View
Gossypium hirsutum Gohir.D04G122700 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) D04 - View
Gossypium hirsutum Gohir.A04G083900 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) A04 - View
Glycine max Glyma.01G100200 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Gm01 - View
Glycine max Glyma.03G068800 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Gm03 - View
Gossypium raimondii Gorai.012G105600 Chr12 - View
Lotus japonicus Lj3g0008944 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) chr3 + View
Lonicera japonica Lj3A964T54 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_5_153940 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Lsat_1_v8_lg_5 + View
Magnolia biondii MBI05_g35634_MAGBIO AED:0.38 Chr05 - View
Malus domestica MD12G1146200 Protein of unknown function Chr12 - View
Malus domestica MD04G1133400 Protein of unknown function Chr04 - View
Manihot esculenta Manes.09G092200 Chromosome09 + View
Nelumbo nucifera Nn2g11189 chr2 - View
Olea europaea Oeu007799.1 scaffold1286 - View
Petunia axillaris Peaxi162Scf00094g00911 phytochrome A specific signal transduction component family protein Peaxi162Scf00094 + View
Punica granatum PGR031G0341 NC_045127.1 - View
Prunus persica Prupe.6G259400 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Pp06 - View
Papaver somniferum PSO339G2759 NC_039366.1 - View
Papaver somniferum PSO063G2683 NC_039364.1 - View
Populus trichocarpa Potri.016G100600 PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) Chr16 - View
Phaseolus vulgaris Phvul.010G015600 Chr10 - View
Quercus lobata QL07p030104 7 + View
Rhododendron simsii Rhsim05G0195000 chr05 - View
Striga asiatica SGA_v2.0_scaffold126G33759 scaffold126 + View
Salix brachista Sabra16G0101600 GWHAAZH00000016 - View
Sechium edule Sed0022090 LG03 - View
Solanum lycopersicum Solyc10g084850.2 Vacuolar import/degradation protein Vid24 (AHRD V3.3 *** A0A2U1N9Z6_ARTAN) SL4.0ch10 - View
Schrenkiella parvula Sp4g20050 PTHR37723:SF2 - FHY1-3 ch4-6 - View
Solanum pennellii Sopen10g034290 CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400011070 FHY1 ST4.03ch10 + View
Trochodendron aralioides TAR623G0888 group7 - View
Theobroma cacao Thecc.05G035400 Uncharacterized protein Chromosome_5 + View
Tarenaya hassleriana THA.LOC104823414 glucose-induced degradation protein 4 homolog NW_010966881.1 + View
Tarenaya hassleriana THA.LOC104806558 protein FAR-RED ELONGATED HYPOCOTYL 1 isoform X1 NW_010962392.1 + View
Tripterygium wilfordii TWI74G0393 NC_052234.1 - View
Vaccinium macrocarpon vmacro20179 Similar to Gid4: Glucose-induced degradation protein 4 homolog (Mus musculus OX%3D10090) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01034127001 chr8 - View