Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia11219 Lachesis_group5 + View
Actinidia chinensis Actinidia06120 Lachesis_group8 - View
Arabidopsis lyrata AL4G41570 scaffold_4 - View
Arabidopsis thaliana AT2G42940 Putative AT-hook DNA-binding family protein Encodes a nuclear matrix protein with AT-hook DNA binding motifs that acts in the maintenance of genomic integrity by silencing TEs and repeat-containing genes through epigenetic machinery. It interacts with FVE and MSI5 which are components of HDAC corepressor complexes. It is expressed in tapetum during the tetrad stage. Predicted AT-hook DNA-binding family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: leaf whorl%2C sepal%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%2C Predicted AT-hook DNA-binding (InterPro:IPR014476)%3B BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1)%3B Has 767 Blast hits to 762 proteins in 28 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 0%3B Fungi - 0%3B Plants - 756%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr2 - View
Brassica napus C04p04040 C04 - View
Brassica oleracea BolC4t22043H C4 - View
Brassica rapa BraA05t19332Z A05 - View
Capsicum annuum CAN.G585.31 PGAv.1.6.scaffold585 - View
Cannabis sativa CANSAT64G2076 NC_044379.1 + View
Cicer arietinum L. Ca_06280_v3 Ca_LG2_v3 + View
Coffea canephora Cc05_g09540 Predicted AT-hook DNA-binding family protein chr5 + View
Citrus clementina Ciclev10032444m.g scaffold_4 + View
Carica papaya Cpa.g.sc50.90 supercontig_50 - View
Capsella rubella Carub.0004s2541 PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 scaffold_4 - View
Daucus carota DCAR_009798 hypothetical protein DCARv2_Chr3 + View
Durio zibethinus Duzib147G1473 NW_019168470.1 - View
Durio zibethinus Duzib264G0247 NW_019167960.1 - View
Eutrema salsugineum Thhalv10017103m.g PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 scaffold_10 - View
Fragaria x ananassa FAN02G0452 PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Fvb6-4 - View
Fragaria vesca FvH4_6g38311 PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Fvb6 - View
Glycine max Glyma.02G285500 PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Gm02 - View
Glycine max Glyma.14G028600 PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Gm14 - View
Lupinus albus Lalb_Chr10g0106651 PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Lalb_Chr10 + View
Lupinus albus Lalb_Chr04g0248821 PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Lalb_Chr04 - View
Lotus japonicus LjContig00310g0022124 PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Contig00310 - View
Lonicera japonica Lj1P617T48 GWHAAZE00000001 - View
Malus domestica MD09G1151100 Predicted AT-hook DNA-binding family protein Chr09 + View
Malus domestica MD17G1138700 Predicted AT-hook DNA-binding family protein Chr17 + View
Medicago truncatula Medtr5g091630 AT hook motif DNA-binding family protein chr5 + View
Petunia axillaris Peaxi162Scf00111g00015 AT-hook motif nuclear-localized protein 20 Peaxi162Scf00111 + View
Punica granatum PGR142G3482 NC_045128.1 + View
Prunus persica Prupe.3G173700 PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Pp03 - View
Pisum sativum Psat2g016040 Domain of unknown function (DUF296) chr2LG1 - View
Populus trichocarpa Potri.005G202700 PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 Chr05 - View
Phaseolus vulgaris Phvul.008G050100 PTHR31100:SF14 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 21-RELATED Chr08 + View
Quercus lobata QL08p044285 8 - View
Rosa chinensis RcHm_v2.0_Chr2g0151621 RcHm_v2.0_Chr2 - View
Salix brachista Sabra05G0154100 GWHAAZH00000005 - View
Solanum lycopersicum Solyc07g056300.1 AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2K3MS42_TRIPR) SL4.0ch07 - View
Solanum tuberosum PGSC0003DMG400017302 DNA binding protein ST4.03ch07 + View
Theobroma cacao Thecc.01G162800 AT-hook DNA-binding family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104803277 AT-hook motif nuclear-localized protein 16-like NW_010960188.1 - View
Trifolium pratense TPR.G12653 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI14G0670 NC_052249.1 - View
Tripterygium wilfordii TWI59G0802 NC_052248.1 - View
Vigna mungo VMungo0647G0715 CM024073.1 + View