Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia11219 | Lachesis_group5 | + | View | |
Actinidia chinensis | Actinidia06120 | Lachesis_group8 | - | View | |
Arabidopsis lyrata | AL4G41570 | scaffold_4 | - | View | |
Arabidopsis thaliana | AT2G42940 | Putative AT-hook DNA-binding family protein Encodes a nuclear matrix protein with AT-hook DNA binding motifs that acts in the maintenance of genomic integrity by silencing TEs and repeat-containing genes through epigenetic machinery. It interacts with FVE and MSI5 which are components of HDAC corepressor complexes. It is expressed in tapetum during the tetrad stage. Predicted AT-hook DNA-binding family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: leaf whorl%2C sepal%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%2C Predicted AT-hook DNA-binding (InterPro:IPR014476)%3B BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT2G35270.1)%3B Has 767 Blast hits to 762 proteins in 28 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 0%3B Fungi - 0%3B Plants - 756%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). | Chr2 | - | View |
Brassica napus | C04p04040 | C04 | - | View | |
Brassica oleracea | BolC4t22043H | C4 | - | View | |
Brassica rapa | BraA05t19332Z | A05 | - | View | |
Capsicum annuum | CAN.G585.31 | PGAv.1.6.scaffold585 | - | View | |
Cannabis sativa | CANSAT64G2076 | NC_044379.1 | + | View | |
Cicer arietinum L. | Ca_06280_v3 | Ca_LG2_v3 | + | View | |
Coffea canephora | Cc05_g09540 | Predicted AT-hook DNA-binding family protein | chr5 | + | View |
Citrus clementina | Ciclev10032444m.g | scaffold_4 | + | View | |
Carica papaya | Cpa.g.sc50.90 | supercontig_50 | - | View | |
Capsella rubella | Carub.0004s2541 | PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | scaffold_4 | - | View |
Daucus carota | DCAR_009798 | hypothetical protein | DCARv2_Chr3 | + | View |
Durio zibethinus | Duzib147G1473 | NW_019168470.1 | - | View | |
Durio zibethinus | Duzib264G0247 | NW_019167960.1 | - | View | |
Eutrema salsugineum | Thhalv10017103m.g | PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | scaffold_10 | - | View |
Fragaria x ananassa | FAN02G0452 | PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Fvb6-4 | - | View |
Fragaria vesca | FvH4_6g38311 | PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Fvb6 | - | View |
Glycine max | Glyma.02G285500 | PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Gm02 | - | View |
Glycine max | Glyma.14G028600 | PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Gm14 | - | View |
Lupinus albus | Lalb_Chr10g0106651 | PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Lalb_Chr10 | + | View |
Lupinus albus | Lalb_Chr04g0248821 | PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Lalb_Chr04 | - | View |
Lotus japonicus | LjContig00310g0022124 | PTHR31100//PTHR31100:SF17 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Contig00310 | - | View |
Lonicera japonica | Lj1P617T48 | GWHAAZE00000001 | - | View | |
Malus domestica | MD09G1151100 | Predicted AT-hook DNA-binding family protein | Chr09 | + | View |
Malus domestica | MD17G1138700 | Predicted AT-hook DNA-binding family protein | Chr17 | + | View |
Medicago truncatula | Medtr5g091630 | AT hook motif DNA-binding family protein | chr5 | + | View |
Petunia axillaris | Peaxi162Scf00111g00015 | AT-hook motif nuclear-localized protein 20 | Peaxi162Scf00111 | + | View |
Punica granatum | PGR142G3482 | NC_045128.1 | + | View | |
Prunus persica | Prupe.3G173700 | PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Pp03 | - | View |
Pisum sativum | Psat2g016040 | Domain of unknown function (DUF296) | chr2LG1 | - | View |
Populus trichocarpa | Potri.005G202700 | PTHR31100:SF17 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 16 | Chr05 | - | View |
Phaseolus vulgaris | Phvul.008G050100 | PTHR31100:SF14 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 21-RELATED | Chr08 | + | View |
Quercus lobata | QL08p044285 | 8 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0151621 | RcHm_v2.0_Chr2 | - | View | |
Salix brachista | Sabra05G0154100 | GWHAAZH00000005 | - | View | |
Solanum lycopersicum | Solyc07g056300.1 | AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2K3MS42_TRIPR) | SL4.0ch07 | - | View |
Solanum tuberosum | PGSC0003DMG400017302 | DNA binding protein | ST4.03ch07 | + | View |
Theobroma cacao | Thecc.01G162800 | AT-hook DNA-binding family protein | Chromosome_1 | - | View |
Tarenaya hassleriana | THA.LOC104803277 | AT-hook motif nuclear-localized protein 16-like | NW_010960188.1 | - | View |
Trifolium pratense | TPR.G12653 | Tp57577_TGAC_v2_LG4 | - | View | |
Tripterygium wilfordii | TWI14G0670 | NC_052249.1 | - | View | |
Tripterygium wilfordii | TWI59G0802 | NC_052248.1 | - | View | |
Vigna mungo | VMungo0647G0715 | CM024073.1 | + | View |