Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CDE08G1055 6 + View
CDE04G2183 2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6710 LG-5 + View
Actinidia chinensis Actinidia34458 Lachesis_group15 + View
Actinidia chinensis Actinidia23883 Lachesis_group9 - View
Actinidia chinensis Actinidia20742 Lachesis_group0 + View
Arabidopsis lyrata AL4G24730 scaffold_4 - View
Arabidopsis lyrata AL6G15470 scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.722ASC 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT3G11170 fatty acid desaturase 7 Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids%2C sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid. fatty acid desaturase 7 (FAD7)%3B FUNCTIONS IN: omega-3 fatty acid desaturase activity%3B INVOLVED IN: response to cold%2C response to wounding%2C fatty acid biosynthetic process%2C jasmonic acid mediated signaling pathway%3B LOCATED IN: plastid membrane%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: male gametophyte%2C guard cell%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863)%2C Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1)%3B Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0%3B Bacteria - 1234%3B Metazoa - 17%3B Fungi - 265%3B Plants - 926%3B Viruses - 0%3B Other Eukaryotes - 496 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G05580 fatty acid desaturase 8 Encodes a temperature sensitive plastidic fatty acid desaturase. fatty acid desaturase 8 (FAD8)%3B FUNCTIONS IN: omega-3 fatty acid desaturase activity%3B INVOLVED IN: response to temperature stimulus%2C fatty acid biosynthetic process%3B LOCATED IN: chloroplast%2C chloroplast envelope%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863)%2C Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). fatty acid desaturase 8 (FAD8)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863)%2C Fatty acid desaturase%2C type 1 (InterPro:IPR005804)%3B BEST Arabidopsis thaliana protein match is: fatty acid desaturase 7 (TAIR:AT3G11170.1). Chr5 + View
Brassica carinata BcaB02g10285 ChrB02 - View
Brassica carinata BcaC02g11077 ChrC02 - View
Brassica napus C04p58830 C04 - View
Brassica rapa BraA05t22604Z A05 - View
Camellia sinensis var. sinensis CSS0026276 omega-3 fatty acid desaturase [Paeonia lactiflora] Chr11 - View
Cicer arietinum L. Ca_05613_v3 Ca_LG2_v3 - View
Corylus avellana Haze_21016 Similar to FAD7: Omega-3 fatty acid desaturase, chloroplastic (Sesamum indicum OX%3D4182) 10 - View
Corylus avellana Haze_17236 Similar to FAD7A-1: Omega-3 fatty acid desaturase, chloroplastic (Ricinus communis OX%3D3988) 11 - View
Citrus clementina Ciclev10011691m.g scaffold_6 - View
Cardamine hirsuta CARHR123220 Omega-3 fatty acid desaturase Chr4 - View
Carya illinoinensis CiPaw.09G210400 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Chr09 - View
Carya illinoinensis CiPaw.14G058400 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Chr14 + View
Carya illinoinensis CiPaw.02G193200 PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Chr02 - View
Cucumis melo MELO3C020541.2 Omega-3 fatty acid desaturase chr12 + View
Capsella rubella Carub.0003s1049 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) scaffold_3 + View
Davidia involucrata Dinv21740 GWHABJS00000004 + View
Davidia involucrata Dinv03101 GWHABJS00000007 - View
Davidia involucrata Dinv28652 GWHABJS00000010 - View
Durio zibethinus Duzib128G1016 NW_019168481.1 - View
Erigeron canadensis ECA238G2309 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.A00526 Chr01 + View
Erythranthe guttata Migut.J00153 scaffold_10 + View
Eutrema salsugineum Thhalv10020755m.g K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) scaffold_13 - View
Fragaria x ananassa FAN03G0851 PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Fvb7-3 - View
Fragaria x ananassa FAN01G1736 PTHR32100:SF17 - OMEGA-3 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Fvb7-4 + View
Glycine max Glyma.18G202600 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Gm18 - View
Glycine max Glyma.03G056700 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Gm03 + View
Lupinus albus Lalb_Chr04g0252211 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Lalb_Chr04 + View
Lonicera japonica Lj1C133T1 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_11680 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_2_124580 Lsat_1_v8_lg_2 - View
Malus domestica MD03G1067900 fatty acid desaturase 8 Chr03 - View
Malus domestica MD11G1072300 fatty acid desaturase 7 Chr11 + View
Malus domestica MD04G1155400 fatty acid desaturase 8 Chr04 - View
Prunus persica Prupe.6G055900 Pp06 + View
Populus trichocarpa Potri.008G069600 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Chr08 - View
Populus trichocarpa Potri.006G101500 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Chr06 - View
Phaseolus vulgaris Phvul.008G098100 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Chr08 + View
Rosa chinensis RcHm_v2.0_Chr1g0370421 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim04G0127400 chr04 + View
Rhododendron simsii Rhsim13G0068200 chr13 + View
Simmondsia chinensis Sc10g0002420 GWHAASQ00000010 - View
Sechium edule Sed0028105 LG01 - View
Sapria himalayana SHI12837 scaffold11_13529635 + View
Schrenkiella parvula Sp3g09460 K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) ch3-1 + View
Trochodendron aralioides TAR633G0768 group2 - View
Trochodendron aralioides TAR369G0613 group18 + View
Theobroma cacao Thecc.10G015100 Fatty acid desaturase 8 Chromosome_10 + View
Vaccinium macrocarpon vmacro02953 Similar to FAD7A-1: Omega-3 fatty acid desaturase, chloroplastic (Ricinus communis OX%3D3988) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06961 Similar to FAD7: Omega-3 fatty acid desaturase, chloroplastic (Sesamum indicum OX%3D4182) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro08882 Similar to FAD7A-1: Omega-3 fatty acid desaturase, chloroplastic (Ricinus communis OX%3D3988) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011171001 chr8 - View
Vitis vinifera GSVIVG01024726001 chr6 - View
Zea mays Zm00001eb397050 Zm00001e038420 Fatty acid desaturase fatty acid desaturase7 9 + View
Zea mays Zm00001eb013340 Zm00001e001309 fatty acid desaturase8 1 + View