Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CAN.G837.19 PGAv.1.6.scaffold837 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G1180 LG-11 - View
Arabidopsis lyrata AL5G26790 scaffold_5 + View
Avicennia marina MSTRG.13423 ScioBoG_18778_HRSCAF_18863 - View
Amaranthus hybridus Ah.02g113520 AmaHy_arrow1_Scaffold_2 - View
Amaranthus hybridus Ah.11g048380 AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy3G03383 CHR03 - View
Arabidopsis thaliana AT5G62460 RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G47550.6)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G47550 RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to salt stress%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1)%3B Has 1858 Blast hits to 1855 proteins in 210 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 851%3B Fungi - 126%3B Plants - 608%3B Viruses - 31%3B Other Eukaryotes - 242 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to salt stress%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1)%3B Has 1874 Blast hits to 1869 proteins in 210 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 852%3B Fungi - 126%3B Plants - 623%3B Viruses - 31%3B Other Eukaryotes - 242 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB01g00908 ChrB01 - View
Brassica napus A02p42320 A02 + View
Brassica oleracea BolC3t19463H C3 + View
Brassica rapa BraA06t25866Z A06 + View
Beta vulgaris EL10Ac5g11019 Chr5_EL10_PGA_scaffold2 - View
Beta vulgaris EL10Ac6g13207 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0049542 PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera] Chr2 + View
Camellia sinensis var. sinensis CSS0041018 PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera] Chr15 + View
Corylus avellana Haze_07325 Protein of unknown function 4 + View
Carpinus fangiana Cfa018941 Cfa08 + View
Cardamine hirsuta CARHR156180 RING/FYVE/PHD zinc finger superfamily protein Chr5 + View
Carya illinoinensis CiPaw.11G044700 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr11 - View
Chenopodium quinoa AUR62005790 march4: E3 ubiquitin-protein ligase MARCH4 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0008s2313 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_8 + View
Capsella rubella Carub.0005s1363 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_5 + View
Daucus carota DCAR_016557 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_007152 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv38713 GWHABJS00000019 + View
Durio zibethinus Duzib205G1270 NW_019168381.1 - View
Durio zibethinus Duzib251G0706 NW_019167971.1 + View
Durio zibethinus Duzib068G1252 NW_019167838.1 - View
Erigeron canadensis ECA246G2097 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA247G0526 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.B00505 Chr02 - View
Eucalyptus grandis Eucgr.B03447 Chr02 + View
Erythranthe guttata Migut.L01292 scaffold_12 + View
Eutrema salsugineum Thhalv10010967m.g PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_16 - View
Eutrema salsugineum Thhalv10004664m.g PTHR23012//PTHR23012:SF96 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_6 - View
Fragaria x ananassa FAN18G2626 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria x ananassa FAN08G3388 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN22G0695 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN14G2950 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria x ananassa FAN04G0822 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5-4 - View
Fragaria vesca FvH4_5g14930 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5 + View
Fragaria vesca FvH4_6g48470 PTHR23012//PTHR23012:SF94 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb6 - View
Glycine max Glyma.04G169300 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Gm04 + View
Glycine max Glyma.06G194100 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Gm06 - View
Hydrangea macrophylla Hma1.2p1_0265F.1_g106790 Hma1.2p1_0265F.1 - View
Lotus japonicus Lj1g0012133 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED chr1 - View
Lactuca sativa Lsat_1_v5_gn_5_19621 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_1_12921 Lsat_1_v8_lg_1 - View
Malus domestica MD06G1193400 RING/FYVE/PHD zinc finger superfamily protein Chr06 - View
Manihot esculenta Manes.06G092200 Chromosome06 + View
Manihot esculenta Manes.05G101500 Chromosome05 - View
Medicago truncatula Medtr7g010610 RING-variant domain protein chr7 - View
Petunia axillaris Peaxi162Scf00013g00341 RING/FYVE/PHD zinc finger superfamily protein Peaxi162Scf00013 - View
Punica granatum PGR083G0801 NC_045133.1 - View
Punica granatum PGR102G2380 NC_045129.1 - View
Prunus persica Prupe.1G274900 Pp01 - View
Phaseolus vulgaris Phvul.009G187100 Chr09 + View
Quercus lobata QL10p017026 10 - View
Quercus lobata QL03p063896 3 - View
Rosa chinensis RcHm_v2.0_Chr7g0181451 RcHm_v2.0_Chr7 - View
Simmondsia chinensis Sc04g0002650 GWHAASQ00000004 - View
Simmondsia chinensis Sc04g0008120 GWHAASQ00000004 + View
Solanum lycopersicum Solyc06g069780.4 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) SL4.0ch06 + View
Solanum lycopersicum Solyc03g116030.4 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) SL4.0ch03 + View
Schrenkiella parvula Sp5g14330 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED ch5-1 - View
Solanum pennellii Sopen06g027070 RING/FYVE/PHD zinc finger superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to salt stress | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 , Zinc finger, C3HC4 RING-type , Zinc finger, RING-CH-type | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen03g035020 RING/FYVE/PHD zinc finger superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to salt stress | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 , Zinc finger, C3HC4 RING-type , Zinc finger, RING-CH-type | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400019512 Membrane associated ring finger 1,8 ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400033082 Membrane associated ring finger 1,8 ST4.03ch06 + View
Selenicereus undatus Hund02649 Scaffold_33678 + View
Trochodendron aralioides TAR371G1289 group13 - View
Trochodendron aralioides TAR374G1382 group12 + View
Theobroma cacao Thecc.03G087700 RING/FYVE/PHD zinc finger superfamily protein Chromosome_3 - View
Theobroma cacao Thecc.04G082100 Unknown Chromosome_4 - View
Tarenaya hassleriana THA.LOC104822125 uncharacterized protein LOC104822125 NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104818257 E3 ubiquitin-protein ligase MARCH7 NW_010966092.1 - View
Utricularia gibba unitig_26.g10302 unitig_26 + View
Vaccinium macrocarpon vmacro16546 Similar to SUD1: Probable E3 ubiquitin ligase SUD1 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2709 CM024072.1 - View
Vitis vinifera GSVIVG01008001001 chr17 - View