Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A02p33530 A02 + View
A06p42960 A06 - View
C07p34060 C07 + View
C02p51650 C02 + View
A09p24590 A09 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G8730 LG-7 + View
Aethionema arabicum Aa31LG2G6980 LG-2 - View
Acer truncatum Atru.chr11.1588 chr11 - View
Arabidopsis lyrata AL5G13490 scaffold_5 + View
Avicennia marina MSTRG.772 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.13458 ScioBoG_18778_HRSCAF_18863 + View
Aquilegia oxysepala Aqoxy3G03711 CHR03 - View
Arabidopsis thaliana AT2G03710 K-box region and MADS-box transcription factor family protein This gene belongs to the family of SEP genes. It is involved in the development of sepals%2C petals%2C stamens and carpels. Additionally%2C it plays a central role in the determination of flower meristem and organ identity. SEPALLATA 4 (SEP4)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: in 6 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1)%3B Has 7361 Blast hits to 7360 proteins in 917 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 643%3B Fungi - 310%3B Plants - 6307%3B Viruses - 0%3B Other Eukaryotes - 97 (source: NCBI BLink). SEPALLATA 4 (SEP4)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: in 6 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1)%3B Has 7369 Blast hits to 7368 proteins in 921 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 645%3B Fungi - 306%3B Plants - 6326%3B Viruses - 0%3B Other Eukaryotes - 88 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC04g21467 ChrC04 - View
Brassica carinata BcaC03g17231 ChrC03 + View
Brassica carinata BcaB07g30658 ChrB07 - View
Brassica carinata BcaC06g31160 ChrC06 - View
Brassica carinata BcaB07g30286 ChrB07 - View
Brassica oleracea BolC7t43920H C7 + View
Brassica oleracea BolC9t56005H C9 + View
Brassica oleracea BolC2t11250H C2 + View
Brassica rapa BraA09t38048Z A09 + View
Corylus avellana Haze_11875 Similar to AP1: Agamous-like MADS-box protein AP1 (Vitis vinifera OX%3D29760) 9 - View
Citrus clementina Ciclev10032490m.g scaffold_4 - View
Citrus clementina Ciclev10021357m.g scaffold_3 + View
Cardamine hirsuta CARHR146030 MADS box transcription factor Chr5 + View
Citrullus lanatus ClCG08G010530 MADS-box transcription factor CG_Chr08 + View
Cucumis melo MELO3C011410.2 MADS-box transcription factor chr03 + View
Carica papaya Cpa.g.sc1.162 supercontig_1 + View
Chenopodium quinoa AUR62003073 AP1: Floral homeotic protein APETALA 1 C_Quinoa_Scaffold_1000 - View
Chenopodium quinoa AUR62007887 AP1: Floral homeotic protein APETALA 1 C_Quinoa_Scaffold_2646 - View
Capsella rubella Carub.0005s0283 PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED scaffold_5 + View
Daucus carota DCAR_007203 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv20146 GWHABJS00000018 + View
Davidia involucrata Dinv34039 GWHABJS00000008 - View
Durio zibethinus Duzib248G1205 NW_019168048.1 + View
Durio zibethinus Duzib251G0177 NW_019167971.1 - View
Eucalyptus grandis Eucgr.G02427 Chr07 - View
Erythranthe guttata Migut.L01170 scaffold_12 - View
Erythranthe guttata Migut.E00037 scaffold_5 - View
Eutrema salsugineum Thhalv10004767m.g PTHR11945:SF194 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED scaffold_6 - View
Fragaria x ananassa FAN17G2823 PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Fvb4-2 + View
Fragaria x ananassa FAN07G2750 PTHR11945:SF194 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED Fvb4-4 + View
Fragaria x ananassa FAN22G2346 PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Fvb4-1 - View
Fragaria vesca FvH4_4g29600 PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Fvb4 - View
Gossypium hirsutum Gohir.A13G085500 PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED A13 - View
Gossypium hirsutum Gohir.D13G084300 PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED D13 + View
Gossypium hirsutum Gohir.D12G163000 D12 - View
Glycine max Glyma.02G121500 PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED Gm02 + View
Lupinus albus Lalb_Chr17g0341381 PTHR11945:SF194 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED Lalb_Chr17 + View
Lupinus albus Lalb_Chr04g0255481 PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Lalb_Chr04 - View
Lotus japonicus Lj2g0007167 PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED chr2 + View
Lonicera japonica Lj6A775T25 GWHAAZE00000006 - View
Malus domestica MD16G1058500 K-box region and MADS-box transcription factor family protein Chr16 - View
Malus domestica MD06G1204100 K-box region and MADS-box transcription factor family protein Chr06 + View
Malus domestica MD13G1059200 K-box region and MADS-box transcription factor family protein Chr13 - View
Manihot esculenta Manes.01G025600 Chromosome01 - View
Manihot esculenta Manes.05G111950 Chromosome05 + View
Manihot esculenta Manes.06G081800 Chromosome06 - View
Manihot esculenta Manes.14G088400 Chromosome14 + View
Punica granatum PGR119G1755 NC_045132.1 - View
Prunus persica Prupe.1G290500 Pp01 + View
Papaver somniferum PSO782G3238 NC_039365.1 + View
Populus trichocarpa Potri.008G098400 PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED Chr08 + View
Populus trichocarpa Potri.010G154100 PTHR11945//PTHR11945:SF180 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr10 - View
Populus trichocarpa Potri.017G099700 PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr17 + View
Rosa chinensis RcHm_v2.0_Chr4g0437841 RcHm_v2.0_Chr4 - View
Striga asiatica SGA_v2.0_scaffold287G47181 scaffold287 + View
Striga asiatica SGA_v2.0_scaffold36G14478 scaffold36 + View
Salix brachista Sabra08G0074400 GWHAAZH00000008 + View
Simmondsia chinensis Sc11g0002580 GWHAASQ00000011 + View
Simmondsia chinensis Sc04g0007430 GWHAASQ00000004 - View
Solanum lycopersicum Solyc05g056620.2 macrocalyx SL4.0ch05 - View
Schrenkiella parvula Sp2g14520 PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED ch2-4 + View
Schrenkiella parvula Sp1g22380 PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED ch1-1 + View
Solanum tuberosum PGSC0003DMG400028359 MADS-box transcription factor ST4.03ch05 + View
Selenicereus undatus Hund25160 Scaffold_3410 - View
Theobroma cacao Thecc.03G106300 Chromosome_3 + View
Theobroma cacao Thecc.02G325800 K-box region and MADS-box transcription factor family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104805206 agamous-like MADS-box protein AGL3 NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104801828 agamous-like MADS-box protein AGL3 NW_010970030.1 + View