Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A01p29730 A01 - View
C01p37550 C01 - View
A09p16960 A09 + View
C08p48400 C08 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G3900 LG-1 + View
Aethionema arabicum Aa31LG2G9620 LG-2 + View
Arabidopsis lyrata AL1G21950 scaffold_1 - View
Arabidopsis lyrata AL2G15530 scaffold_2 + View
Arabidopsis thaliana AT1G10970 zinc transporter A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper%2C but response to copper deficiency is detected only after three weeks of deficiency. zinc transporter 4 precursor (ZIP4)%3B CONTAINS InterPro DOMAIN/s: Zinc/iron permease%2C fungal/plant (InterPro:IPR004698)%2C Zinc/iron permease (InterPro:IPR003689)%3B BEST Arabidopsis thaliana protein match is: iron regulated transporter 3 (TAIR:AT1G60960.1)%3B Has 2241 Blast hits to 2085 proteins in 351 species: Archae - 0%3B Bacteria - 278%3B Metazoa - 580%3B Fungi - 588%3B Plants - 521%3B Viruses - 0%3B Other Eukaryotes - 274 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G60960 iron regulated transporter 3 Encodes a plasma membrane localized zinc/iron transporter. iron regulated transporter 3 (IRT3)%3B FUNCTIONS IN: cation transmembrane transporter activity%2C zinc ion transmembrane transporter activity%2C metal ion transmembrane transporter activity%2C iron ion transmembrane transporter activity%3B INVOLVED IN: cation transport%2C zinc ion transport%2C response to nematode%2C iron ion transport%2C metal ion transport%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc/iron permease%2C fungal/plant (InterPro:IPR004698)%2C Zinc/iron permease (InterPro:IPR003689)%3B BEST Arabidopsis thaliana protein match is: zinc transporter 4 precursor (TAIR:AT1G10970.1)%3B Has 3842 Blast hits to 3068 proteins in 499 species: Archae - 2%3B Bacteria - 683%3B Metazoa - 1421%3B Fungi - 659%3B Plants - 616%3B Viruses - 7%3B Other Eukaryotes - 454 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB04g20297 ChrB04 - View
Brassica carinata BcaC02g10613 ChrC02 + View
Brassica carinata BcaC09g49351 ChrC09 + View
Brassica carinata BcaC06g31824 ChrC06 - View
Brassica carinata BcaB07g31254 ChrB07 - View
Brassica carinata BcaC04g22298 ChrC04 - View
Brassica oleracea BolC8t52379H C8 + View
Brassica oleracea BolC4t24232H C4 - View
Brassica oleracea BolC9t54998H C9 + View
Brassica rapa BraA09t37333Z A09 + View
Brassica rapa BraA01t03100Z A01 - View
Brassica rapa BraA09t41816Z A09 + View
Cardamine hirsuta CARHR011180 Zinc transporter 4 Chr1 - View
Cardamine hirsuta CARHR051990 Zinc transporter 4 Chr2 - View
Capsella rubella Carub.0002s0430 PTHR11040//PTHR11040:SF52 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED scaffold_2 + View
Capsella rubella Carub.0001s1055 PTHR11040//PTHR11040:SF44 - ZINC/IRON TRANSPORTER // ZIP ZINC TRANSPORTER PROTEIN-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10007788m.g PTHR11040:SF44 - ZIP ZINC TRANSPORTER PROTEIN-RELATED scaffold_5 + View
Eutrema salsugineum Thhalv10023475m.g PTHR11040//PTHR11040:SF52 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED scaffold_8 + View
Simmondsia chinensis Sc24g0000850 GWHAASQ00000024 - View
Schrenkiella parvula Sp2g03620 PTHR11040:SF44 - ZIP ZINC TRANSPORTER PROTEIN-RELATED ch2-2 + View
Schrenkiella parvula Sp1g09690 PTHR11040//PTHR11040:SF52 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED ch1-1 - View