Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A09p59690 A09 - View
A06p14890 A06 + View
C08p18910 C08 + View
A08p30230 A08 - View
C05p17060 C05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G3540 LG-7 + View
Arabidopsis lyrata AL1G31230 scaffold_1 + View
Arabidopsis thaliana AT1G18750 AGAMOUS-like 65 Encodes a member of the MIKC (MADS box%2C Keratin binding domain%2C and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth. AGAMOUS-like 65 (AGL65)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: pollen development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2)%3B Has 6713 Blast hits to 6650 proteins in 771 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 853%3B Fungi - 361%3B Plants - 5148%3B Viruses - 0%3B Other Eukaryotes - 351 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB03g14479 ChrB03 - View
Brassica carinata BcaB07g31892 ChrB07 + View
Brassica carinata BcaB03g12962 ChrB03 - View
Brassica carinata BcaC05g25775 ChrC05 + View
Brassica carinata BcaC07g41294 ChrC07 - View
Brassica carinata BcaC07g38943 ChrC07 + View
Brassica oleracea BolC5t30412H C5 + View
Brassica oleracea BolC8t49515H C8 + View
Brassica oleracea BolC8t51858H C8 - View
Brassica rapa BraA08t34956Z A08 - View
Brassica rapa BraA06t24609Z A06 + View
Brassica rapa BraA09t41346Z A09 - View
Cicer arietinum L. Ca_21814_v3 Ca_LG7_v3 - View
Cardamine hirsuta CARHR019390 MADS-box transcription factor Chr1 + View
Carya illinoinensis CiPaw.12G012500 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Chr12 + View
Capsella rubella Carub.0002s2124 scaffold_2 + View
Capsella rubella Carub.0001s1840 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED scaffold_1 + View
Eutrema salsugineum Thhalv10019839m.g PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED scaffold_9 - View
Eutrema salsugineum Thhalv10007954m.g PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED scaffold_5 - View
Schrenkiella parvula Sp1g16760 PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED ch1-1 + View
Tarenaya hassleriana THA.LOC104813882 agamous-like MADS-box protein AGL65 isoform X1 NW_010965373.1 - View