Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
C07p63290 C07 - View
A08p23730 A08 - View
A09p58100 A09 - View
C04p50750 C04 + View
C03p77710 C03 + View
A04p16250 A04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16030 LG-6 - View
Aethionema arabicum Aa31LG7G14880 LG-7 - View
Acer truncatum Atru.chr5.3045 chr5 - View
Actinidia chinensis Actinidia00535 Lachesis_group12 + View
Actinidia chinensis Actinidia27888 Lachesis_group16 - View
Arabidopsis lyrata AL4G10800 scaffold_4 + View
Arabidopsis lyrata AL7G11190 scaffold_7 + View
Avicennia marina MSTRG.16817 ScioBoG_19743_HRSCAF_19834 - View
Avicennia marina MSTRG.5401 ScioBoG_102838_HRSCAF_103081 - View
Avicennia marina MSTRG.25185 ScioBoG_4119_HRSCAF_4138 - View
Amaranthus hybridus Ah.01g019250 Protein RER1B (AtRER1B) AmaHy_arrow1_Scaffold_1 + View
Arabidopsis thaliana AT2G21600 endoplasmatic reticulum retrieval protein 1B Key player of retrieval of ER membrane proteins endoplasmatic reticulum retrieval protein 1B (RER1B)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: retrograde vesicle-mediated transport%2C Golgi to ER%3B LOCATED IN: Golgi apparatus%2C endoplasmic reticulum%2C cis-Golgi network%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932)%3B BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1)%3B Has 516 Blast hits to 512 proteins in 212 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 154%3B Fungi - 152%3B Plants - 129%3B Viruses - 0%3B Other Eukaryotes - 81 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT4G39220 Rer1 family protein Key player of retrieval of ER membrane proteins ATRER1A%3B CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932)%3B BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1)%3B Has 516 Blast hits to 513 proteins in 212 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 155%3B Fungi - 150%3B Plants - 130%3B Viruses - 0%3B Other Eukaryotes - 81 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC02g08779 ChrC02 - View
Brassica carinata BcaC07g41134 ChrC07 - View
Brassica carinata BcaNung03883 Contig1334 - View
Brassica carinata BcaB03g12253 ChrB03 + View
Brassica carinata BcaB06g27776 ChrB06 + View
Brassica carinata BcaNung02348 Contig840 - View
Brassica oleracea BolC3t20028H C3 + View
Brassica oleracea BolC8t51699H C8 - View
Brassica oleracea BolC4t26671H C4 + View
Brassica oleracea BolC7t46740H C7 - View
Brassica rapa BraA04t17264Z A04 + View
Brassica rapa BraA08t34325Z A08 - View
Brassica rapa BraA09t41198Z A09 - View
Beta vulgaris EL10Ac9g21707 PTHR10743 - PROTEIN RER1 Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0030852 PREDICTED: protein RER1B-like [Solanum tuberosum] Chr3 + View
Cicer arietinum L. Ca_20888_v3 Ca_LG6_v3 - View
Corylus avellana Haze_02405 Similar to RER1B: Protein RER1B (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g17360 Protein RER1B chr2 + View
Citrus clementina Ciclev10029324m.g scaffold_8 - View
Cardamine hirsuta CARHR112550 Rer1 family protein Chr4 + View
Cardamine hirsuta CARHR247480 Rer1 family protein Chr7 - View
Carya illinoinensis CiPaw.06G134400 PTHR10743 - PROTEIN RER1 Chr06 + View
Carya illinoinensis CiPaw.05G066500 PTHR10743 - PROTEIN RER1 Chr05 - View
Citrullus lanatus ClCG11G004290 Protein RER1 CG_Chr11 + View
Cucumis melo MELO3C023307.2 Protein RER1A-like protein chr11 - View
Carica papaya Cpa.g.sc62.170 supercontig_62 - View
Chenopodium quinoa AUR62016756 Protein of unknown function C_Quinoa_Scaffold_3670 - View
Capsella rubella Carub.0007s0113 PTHR10743:SF2 - PROTEIN RER1B-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_2G014850 Protein RER1 chr2 - View
Daucus carota DCAR_003665 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv36102 GWHABJS00000002 - View
Davidia involucrata Dinv23504 GWHABJS00000005 + View
Davidia involucrata Dinv42052 GWHABJS00000002 - View
Durio zibethinus Duzib052G0072 NW_019167849.1 - View
Durio zibethinus Duzib041G0722 NW_019167826.1 + View
Durio zibethinus Duzib248G1257 NW_019168048.1 - View
Durio zibethinus Duzib132G0843 NW_019167915.1 + View
Erigeron canadensis ECA236G1818 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.G01688 Chr07 + View
Erythranthe guttata Migut.N01248 scaffold_14 - View
Erythranthe guttata Migut.B00224 scaffold_2 + View
Eutrema salsugineum Thhalv10000333m.g PTHR10743:SF2 - PROTEIN RER1B-RELATED scaffold_15 + View
Eutrema salsugineum Thhalv10026317m.g PTHR10743 - PROTEIN RER1 scaffold_1 + View
Fragaria x ananassa FAN24G2050 PTHR10743 - PROTEIN RER1 Fvb2-2 + View
Gossypium hirsutum Gohir.A13G033600 PTHR10743:SF2 - PROTEIN RER1B-RELATED A13 + View
Gossypium hirsutum Gohir.D02G216600 PTHR10743 - PROTEIN RER1 D02 - View
Gossypium hirsutum Gohir.D13G031500 PTHR10743:SF2 - PROTEIN RER1B-RELATED D13 + View
Gossypium hirsutum Gohir.A11G196600 PTHR10743:SF1 - PROTEIN RER1C A11 - View
Gossypium hirsutum Gohir.D01G004450 PTHR10743 - PROTEIN RER1 D01 + View
Gossypium hirsutum Gohir.A03G195600 PTHR10743 - PROTEIN RER1 A03 - View
Gossypium hirsutum Gohir.A01G004500 PTHR10743:SF2 - PROTEIN RER1B-RELATED A01 + View
Gossypium hirsutum Gohir.D12G029000 PTHR10743:SF2 - PROTEIN RER1B-RELATED D12 - View
Glycine max Glyma.06G011900 PTHR10743 - PROTEIN RER1 Gm06 + View
Glycine max Glyma.04G012100 PTHR10743 - PROTEIN RER1 Gm04 + View
Gossypium raimondii Gorai.008G029700 Chr08 - View
Gossypium raimondii Gorai.002G005400 Chr02 + View
Gossypium raimondii Gorai.005G244700 Chr05 - View
Gossypium raimondii Gorai.013G035900 Chr13 + View
Hydrangea macrophylla Hma1.2p1_0066F.1_g036260 Hma1.2p1_0066F.1 + View
Lupinus albus Lalb_Chr19g0138671 PTHR10743 - PROTEIN RER1 Lalb_Chr19 - View
Lupinus albus Lalb_Chr01g0002471 PTHR10743 - PROTEIN RER1 Lalb_Chr01 + View
Lotus japonicus Lj1g0012514 PTHR10743 - PROTEIN RER1 chr1 - View
Lotus japonicus Lj3g0014972 PTHR10743 - PROTEIN RER1 chr3 + View
Lonicera japonica Lj9A374T111 GWHAAZE00000009 - View
Lonicera japonica Lj4C788G10 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_9_108881 PTHR10743 - PROTEIN RER1 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_7_91001 PTHR10743 - PROTEIN RER1 Lsat_1_v8_lg_7 + View
Manihot esculenta Manes.11G085700 Chromosome11 - View
Medicago truncatula Medtr4g070400 ATRER1A chr4 - View
Nicotiana tabacum Nitab4.5_0000308g0290 Retrieval of early ER protein Rer1 Nitab4.5_0000308 - View
Olea europaea Oeu055596.1 chr15 - View
Olea europaea Oeu041634.1 chr15 + View
Olea europaea Oeu003724.1 chr3 + View
Petunia axillaris Peaxi162Scf00003g01220 Rer1 family protein Peaxi162Scf00003 + View
Petunia axillaris Peaxi162Scf00016g00621 Rer1 family protein Peaxi162Scf00016 + View
Punica granatum PGR042G3362 NC_045130.1 + View
Prunus persica Prupe.8G094300 PTHR10743 - PROTEIN RER1 Pp08 + View
Papaver somniferum PSO675G7041 NC_039358.1 - View
Papaver somniferum PSO541G2728 NC_039363.1 - View
Populus trichocarpa Potri.009G118500 PTHR10743 - PROTEIN RER1 Chr09 - View
Populus trichocarpa Potri.004G156800 PTHR10743 - PROTEIN RER1 Chr04 - View
Phaseolus vulgaris Phvul.011G044200 Chr11 + View
Quercus lobata QL11p044494 11 + View
Rhododendron simsii Rhsim05G0073500 chr05 + View
Rhododendron simsii Rhsim11G0178900 chr11 - View
Salvia bowleyana SalBow6G1928 GWHASIU00000002 + View
Salix brachista Sabra09G0090800 GWHAAZH00000009 - View
Salix brachista Sabra04G0104700 GWHAAZH00000004 + View
Simmondsia chinensis Sc08g0000590 GWHAASQ00000008 - View
Sechium edule Sed0002809 LG01 + View
Sechium edule Sed0002211 LG05 + View
Solanum lycopersicum Solyc01g109770.3 Protein RER1 (AHRD V3.3 *** A0A2G2XNN4_CAPBA) SL4.0ch01 - View
Schrenkiella parvula Sp4g00760 PTHR10743:SF2 - PROTEIN RER1B-RELATED ch4-1 + View
Schrenkiella parvula Sp7g36620 PTHR10743 - PROTEIN RER1 ch7-6 - View
Solanum pennellii Sopen01g051960 Key player of retrieval of ER membrane proteins | endoplasmatic reticulum retrieval protein 1B (RER1B) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER | LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 | BEST Arabidopsis thaliana protein match is: Rer1 family protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400000734 Protein RER1B ST4.03ch01 - View
Selenicereus undatus Hund06243 Scaffold_33676 - View
Selenicereus undatus Hund00250 Scaffold_33678 + View
Trochodendron aralioides TAR625G0018 group4 + View
Trochodendron aralioides TAR376G1192 group14 - View
Theobroma cacao Thecc.02G082900 Rer1 family protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104807740 protein RER1A NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104824818 protein RER1A-like NW_010966933.1 + View
Tarenaya hassleriana THA.LOC104804127 protein RER1A-like NW_010971389.1 + View
Tripterygium wilfordii TWI31G0482 NC_052233.1 - View
Tripterygium wilfordii TWI79G1674 NC_052238.1 - View
Vaccinium macrocarpon vmacro17481 Similar to RER1A: Protein RER1A (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02091 Similar to RER1A: Protein RER1A (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G1948 CM024076.1 + View
Vigna mungo VMungo1309G2355 CM024072.1 - View
Vitis vinifera GSVIVG01023802001 chr3 + View