Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A08p19900 A08 - View
A03p58580 A03 + View
A07p00570 A07 - View
C08p11100 C08 + View
A01p08990 A01 - View
C01p10530 C01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G17070 LG-8 + View
Aethionema arabicum Aa31LG2G21330 LG-2 + View
Arabidopsis lyrata AL7G23460 scaffold_7 - View
Avicennia marina MSTRG.19575 ScioBoG_25048_HRSCAF_25167 + View
Arabidopsis thaliana AT4G29000 Tesmin/TSO1-like CXC domain-containing protein Tesmin/TSO1-like CXC domain-containing protein%3B CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like%2C CXC (InterPro:IPR005172)%3B BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1)%3B Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 285%3B Fungi - 4%3B Plants - 322%3B Viruses - 0%3B Other Eukaryotes - 405 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT2G20110 Tesmin/TSO1-like CXC domain-containing protein Tesmin/TSO1-like CXC domain-containing protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like%2C CXC (InterPro:IPR005172)%3B BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT4G29000.1)%3B Has 1013 Blast hits to 701 proteins in 101 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 299%3B Fungi - 6%3B Plants - 316%3B Viruses - 1%3B Other Eukaryotes - 387 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaNung01338 Contig488 - View
Brassica carinata BcaNung00441 Contig281 + View
Brassica carinata BcaNung02892 Contig973 - View
Brassica carinata BcaC09g51676 ChrC09 + View
Brassica carinata BcaC07g38362 ChrC07 + View
Brassica carinata BcaB03g12589 ChrB03 + View
Brassica oleracea BolC8t48779H C8 + View
Brassica oleracea BolC7t40539H C7 - View
Brassica oleracea BolC7t46135H C7 + View
Brassica oleracea BolC1t01016H C1 - View
Brassica rapa BraA03t14918Z A03 + View
Brassica rapa BraA08t33947Z A08 - View
Brassica rapa BraA07t27853Z A07 - View
Corylus avellana Haze_25770 Similar to TCX5: Protein tesmin/TSO1-like CXC 5 (Arabidopsis thaliana OX%3D3702) 8 - View
Carpinus fangiana Cfa003236 Cfa01 + View
Cardamine hirsuta CARHR110620 Tesmin/TSO1-like CXC domain-containing protein Chr3 + View
Cardamine hirsuta CARHR236730 Tesmin/TSO1-like CXC domain-containing protein Chr7 + View
Carya illinoinensis CiPaw.03G229200 PTHR12446//PTHR12446:SF14 - TESMIN/TSO1-RELATED // PROTEIN LIN-54 HOMOLOG Chr03 + View
Citrullus lanatus ClCG11G002370 Protein tesmin/TSO1-like CXC 5 CG_Chr11 + View
Cucumis melo MELO3C004566.2 Protein tesmin/TSO1-like CXC 5 chr05 - View
Capsella rubella Carub.0003s3438 PTHR12446//PTHR12446:SF14 - TESMIN/TSO1-RELATED // PROTEIN LIN-54 HOMOLOG scaffold_3 + View
Capsella rubella Carub.0007s1164 PTHR12446//PTHR12446:SF14 - TESMIN/TSO1-RELATED // PROTEIN LIN-54 HOMOLOG scaffold_7 - View
Cucumis sativus L. CsaV3_2G002160 Protein tesmin/tso1-like cxc 5 chr2 + View
Davidia involucrata Dinv36655 GWHABJS00000001 - View
Durio zibethinus Duzib150G0851 NW_019167882.1 + View
Durio zibethinus Duzib168G0347 NW_019168159.1 + View
Durio zibethinus Duzib187G1031 NW_019167860.1 - View
Eutrema salsugineum Thhalv10024708m.g PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG scaffold_1 - View
Eutrema salsugineum Thhalv10001964m.g PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG scaffold_12 + View
Gossypium hirsutum Gohir.D07G006900 PTHR12446//PTHR12446:SF14 - TESMIN/TSO1-RELATED // PROTEIN LIN-54 HOMOLOG D07 - View
Gossypium raimondii Gorai.001G006500 Chr01 - View
Manihot esculenta Manes.03G023000 Chromosome03 - View
Papaver somniferum PSO566G0205 NW_020627707.1 + View
Rhododendron simsii Rhsim03G0240100 chr03 + View
Sechium edule Sed0009271 LG08 + View
Schrenkiella parvula Sp3g33400 PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG ch3-6 + View
Schrenkiella parvula Sp7g26940 PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG ch7-5 + View
Tarenaya hassleriana THA.LOC104820052 protein tesmin/TSO1-like CXC 5 isoform X1 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104804023 protein tesmin/TSO1-like CXC 5 NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104814714 protein tesmin/TSO1-like CXC 5 NW_010965451.1 - View
Tripterygium wilfordii TWI63G1363 NC_052240.1 - View
Vaccinium macrocarpon vmacro06227 Similar to TCX5: Protein tesmin/TSO1-like CXC 5 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01015363001 chr11 + View