Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
A02p39720 | A02 | + | View | |
A06p36170 | A06 | - | View | |
C07p42350 | C07 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Arabidopsis lyrata | AL6G37260 | scaffold_6 | - | View | |
Arabidopsis thaliana | AT5G25470 | AP2/B3-like transcriptional factor family protein AP2/B3-like transcriptional factor family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340)%3B BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G25475.3)%3B Has 141 Blast hits to 140 proteins in 5 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 141%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). AP2/B3-like transcriptional factor family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340)%3B BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G25475.3)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr5 | - | View |
Brassica carinata | BcaB04g19788 | ChrB04 | + | View | |
Brassica carinata | BcaNung02264 | Contig832 | + | View | |
Brassica oleracea | BolC7t44768H | C7 | + | View | |
Brassica oleracea | BolC2t12013H | C2 | + | View | |
Brassica rapa | BraA02t08937Z | A02 | + | View | |
Brassica rapa | BraA09t36259Z | A09 | + | View | |
Brassica rapa | BraA06t26539Z | A06 | - | View | |
Cardamine hirsuta | CARHR187920 | AP2/B3-like transcriptional factor family protein | Chr6 | + | View |
Capsella rubella | Carub.0006s2332 | PF02362 - B3 DNA binding domain (B3) | scaffold_6 | - | View |
Eutrema salsugineum | Thhalv10004752m.g | PF02362 - B3 DNA binding domain (B3) | scaffold_6 | - | View |
Schrenkiella parvula | Sp2g22060 | PF02362 - B3 DNA binding domain (B3) | ch2-4 | + | View |