Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
A06p47460 A06 + View
C07p26770 C07 - View
A10p02410 A10 + View
A02p28230 A02 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G3120 LG-5 + View
Arabidopsis lyrata AL1G13460 scaffold_1 + View
Arabidopsis lyrata AL8G15910 scaffold_8 + View
Arabidopsis thaliana AT5G44120 RmlC-like cupins superfamily protein Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene%2C CRA2%2C which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. CRUCIFERINA (CRA1)%3B FUNCTIONS IN: nutrient reservoir activity%3B INVOLVED IN: response to abscisic acid stimulus%3B EXPRESSED IN: guard cell%2C seed%3B EXPRESSED DURING: seedling growth%2C seed development stages%3B CONTAINS InterPro DOMAIN/s: 11-S seed storage protein%2C conserved site (InterPro:IPR022379)%2C Cupin%2C RmlC-type (InterPro:IPR011051)%2C Cupin 1 (InterPro:IPR006045)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%2C 11-S seed storage protein%2C plant (InterPro:IPR006044)%3B BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1)%3B Has 984 Blast hits to 960 proteins in 164 species: Archae - 0%3B Bacteria - 115%3B Metazoa - 2%3B Fungi - 0%3B Plants - 867%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). CRUCIFERINA (CRA1)%3B FUNCTIONS IN: nutrient reservoir activity%3B INVOLVED IN: response to abscisic acid stimulus%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: guard cell%2C seed%3B EXPRESSED DURING: seedling growth%2C seed development stages%3B CONTAINS InterPro DOMAIN/s: 11-S seed storage protein%2C conserved site (InterPro:IPR022379)%2C Cupin%2C RmlC-type (InterPro:IPR011051)%2C Cupin 1 (InterPro:IPR006045)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%2C 11-S seed storage protein%2C plant (InterPro:IPR006044)%3B BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1)%3B Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0%3B Bacteria - 115%3B Metazoa - 2%3B Fungi - 0%3B Plants - 930%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT1G03880 cruciferin 2 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. cruciferin 2 (CRU2)%3B FUNCTIONS IN: nutrient reservoir activity%3B INVOLVED IN: seed germination%2C response to abscisic acid stimulus%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: leaf%2C seed%3B EXPRESSED DURING: seedling growth%2C seed development stages%3B CONTAINS InterPro DOMAIN/s: 11-S seed storage protein%2C conserved site (InterPro:IPR022379)%2C Cupin%2C RmlC-type (InterPro:IPR011051)%2C Cupin 1 (InterPro:IPR006045)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%2C 11-S seed storage protein%2C plant (InterPro:IPR006044)%3B BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G44120.3)%3B Has 919 Blast hits to 884 proteins in 120 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 2%3B Fungi - 0%3B Plants - 906%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g24492 ChrC05 - View
Brassica carinata BcaC06g31652 ChrC06 + View
Brassica carinata BcaC03g16628 ChrC03 - View
Brassica carinata BcaB07g30543 ChrB07 + View
Brassica carinata BcaC06g34592 ChrC06 + View
Brassica oleracea BolC2t10506H C2 - View
Brassica oleracea BolC7t43205H C7 - View
Brassica rapa BraA02t07858Z A02 - View
Brassica rapa BraA06t27615Z A06 + View
Cardamine hirsuta CARHR179150 11S seed storage globulin Chr6 - View
Cardamine hirsuta CARHR003210 11S seed storage globulin B Chr1 + View
Capsella rubella Carub.0001s0302 PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED scaffold_1 + View
Capsella rubella Carub.0008s0440 PTHR31189//PTHR31189:SF1 - FAMILY NOT NAMED // 12S SEED STORAGE PROTEIN CRA1-RELATED scaffold_8 + View
Eutrema salsugineum Thhalv10003429m.g PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED scaffold_17 + View
Schrenkiella parvula Sp2g08950 PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED ch2-4 + View
Tarenaya hassleriana THA.LOC104826044 12S seed storage protein CRA1-like NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104801153 12S seed storage protein CRB-like NW_010969548.1 - View