Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB05g22760 ChrB05 + View
BcaB01g04753 ChrB01 + View
BcaB08g36463 ChrB08 + View
BcaC04g19530 ChrC04 + View
BcaC03g13848 ChrC03 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G13460 LG-1 + View
Arabidopsis lyrata AL6G32920 scaffold_6 - View
Arabidopsis thaliana AT5G21960 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1%2C RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica napus A10p18760 A10 + View
Brassica napus C03p12070 C03 - View
Brassica napus C09p54710 C09 + View
Brassica napus BNapus_Darmor_BZH_scaffold_38p00960 BNapus_Darmor_BZH_scaffold_38 + View
Brassica napus A03p10480 A03 - View
Brassica oleracea BolC2t07123H C2 - View
Brassica oleracea BolC9t58335H C9 + View
Brassica oleracea BolC3t13677H C3 - View
Brassica rapa BraA10t43956Z A10 + View
Cardamine hirsuta CARHR191570 Ethylene-responsive transcription factor Chr6 + View
Capsella rubella Carub.0006s1960 PTHR31985:SF34 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 scaffold_6 - View
Eutrema salsugineum Thhalv10015465m.g PTHR31985:SF34 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 scaffold_2 - View
Schrenkiella parvula Sp6g23230 PTHR31985:SF34 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 ch6-6 + View
Tarenaya hassleriana THA.LOC104810952 ethylene-responsive transcription factor ERF016 NW_010965304.1 + View