Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC08g43560 ChrC08 + View
BcaC05g29095 ChrC05 + View
BcaC09g48399 ChrC09 - View
BcaC08g44137 ChrC08 + View
BcaB02g10885 ChrB02 - View
BcaB04g18836 ChrB04 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G1570 LG-8 - View
Aethionema arabicum Aa31LG10G1470 LG-10 - View
Acer truncatum Atru.chr1.4155 chr1 - View
Arabidopsis lyrata AL1G62540 scaffold_1 + View
Arabidopsis lyrata AL3G26620 scaffold_3 - View
Aquilegia oxysepala Aqoxy7G04182 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G3J01C PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT3G14300 pectinesterase family protein ATPMEPCRC%3B FUNCTIONS IN: pectinesterase activity%3B INVOLVED IN: cell wall modification%3B LOCATED IN: cell wall%3B EXPRESSED IN: flower%3B CONTAINS InterPro DOMAIN/s: Pectinesterase%2C active site (InterPro:IPR018040)%2C Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectinesterase inhibitor (InterPro:IPR006501)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: pectin methylesterase 1 (TAIR:AT1G53840.1)%3B Has 4699 Blast hits to 3111 proteins in 352 species: Archae - 11%3B Bacteria - 646%3B Metazoa - 6%3B Fungi - 210%3B Plants - 3801%3B Viruses - 0%3B Other Eukaryotes - 25 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G53830 pectin methylesterase 2 encodes a pectin methylesterase pectin methylesterase 2 (PME2)%3B FUNCTIONS IN: pectinesterase activity%3B INVOLVED IN: cell wall modification%3B LOCATED IN: extracellular region%2C plant-type cell wall%3B EXPRESSED IN: sepal%2C flower%2C root%2C carpel%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectinesterase%2C active site (InterPro:IPR018040)%2C Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectinesterase inhibitor (InterPro:IPR006501)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: pectin methylesterase 3 (TAIR:AT3G14310.1)%3B Has 3028 Blast hits to 2957 proteins in 336 species: Archae - 6%3B Bacteria - 620%3B Metazoa - 1%3B Fungi - 201%3B Plants - 2174%3B Viruses - 0%3B Other Eukaryotes - 26 (source: NCBI BLink). Chr1 + View
Brassica napus A03p38740 A03 - View
Brassica napus C01p50180 C01 + View
Brassica napus C06p15370 C06 + View
Brassica napus A01p39360 A01 + View
Brassica napus C05p53050 C05 + View
Brassica napus A06p00750 A06 - View
Brassica napus C06p09610 C06 + View
Brassica napus A05p35090 A05 + View
Brassica napus C03p46880 C03 - View
Brassica oleracea BolC5t33986H C5 + View
Brassica oleracea BolC3t16954H C3 - View
Brassica oleracea BolC6t36033H C6 + View
Brassica oleracea BolC6t36709H C6 + View
Brassica oleracea BolC1t04972H C1 + View
Brassica rapa BraA01t03979Z A01 + View
Brassica rapa BraA06t23309Z A06 - View
Brassica rapa BraA03t13022Z A03 - View
Brassica rapa BraA05t22322Z A05 + View
Beta vulgaris EL10Ac7g16495 PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED Chr7_EL10_PGA_scaffold5 - View
Cannabis sativa CANSAT56G2197 NC_044371.1 - View
Corylus avellana Haze_16136 Similar to MPE3: Pectinesterase 3 (Phaseolus vulgaris OX%3D3885) 11 - View
Coffea canephora Cc04_g00680 Pectinesterase/pectinesterase inhibitor U1 chr4 + View
Citrus clementina Ciclev10025232m.g scaffold_7 - View
Carpinus fangiana Cfa003460 Cfa01 + View
Cardamine hirsuta CARHR044140 Pectinesterase Chr1 + View
Cardamine hirsuta CARHR089480 Pectinesterase Chr3 + View
Carya illinoinensis CiPaw.02G130900 PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED Chr02 + View
Carya illinoinensis CiPaw.01G211400 PTHR31707:SF55 - PECTINESTERASE 2-RELATED Chr01 + View
Citrullus lanatus ClCG09G001400 Pectinesterase CG_Chr09 - View
Cucumis melo MELO3C024306.2 pectinesterase-like chr01 + View
Corchorus olitorius COL.COLO4_30864 Pectinesterase%2C catalytic AWUE01020791.1 - View
Carica papaya Cpa.g.sc25.193 supercontig_25 - View
Chenopodium quinoa AUR62001403 Pectinesterase 3 C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0001s4311 PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED scaffold_1 + View
Capsella rubella Carub.0003s1383 PTHR31707:SF42 - PECTINESTERASE 1-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_7G033930 Pectinesterase chr7 + View
Daucus carota DCAR_022649 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv20383 GWHABJS00000019 - View
Durio zibethinus Duzib235G0550 NW_019167982.1 - View
Erythranthe guttata Migut.D00910 scaffold_4 + View
Erythranthe guttata Migut.I01132 scaffold_9 - View
Eutrema salsugineum Thhalv10011342m.g PTHR31707:SF42 - PECTINESTERASE 1-RELATED scaffold_7 - View
Eutrema salsugineum Thhalv10020354m.g PTHR31707:SF55 - PECTINESTERASE 2-RELATED scaffold_13 + View
Fragaria x ananassa FAN05G4839 PTHR31707:SF55 - PECTINESTERASE 2-RELATED Fvb6-3 + View
Fragaria x ananassa FAN02G4144 PTHR31707:SF42 - PECTINESTERASE 1-RELATED Fvb6-4 - View
Fragaria x ananassa FAN09G2838 PTHR31707:SF55 - PECTINESTERASE 2-RELATED Fvb6-2 + View
Fragaria vesca FvH4_6g35820 PTHR31707//PTHR31707:SF42 - FAMILY NOT NAMED // PECTINESTERASE 1-RELATED Fvb6 - View
Gossypium hirsutum Gohir.D10G051600 PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED D10 + View
Gossypium hirsutum Gohir.A10G047600 PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED A10 + View
Gossypium hirsutum Gohir.D07G017500 PTHR31707:SF19 - PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED D07 - View
Glycine max Glyma.07G045967 PTHR31707:SF42 - PECTINESTERASE 1-RELATED Gm07 - View
Glycine max Glyma.16G014000 PTHR31707:SF42 - PECTINESTERASE 1-RELATED Gm16 - View
Gossypium raimondii Gorai.011G055100 Chr11 + View
Helianthus annuus HanXRQChr09g0277261 Probable pectin methylesterase 2 HanXRQChr09 - View
Lotus japonicus Lj3g0026078 PTHR31707:SF55 - PECTINESTERASE 2-RELATED chr3 - View
Lonicera japonica Lj9C538G10 GWHAAZE00000009 - View
Lonicera japonica Lj5A29T57 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_5_137800 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_4_92341 PTHR31707:SF42 - PECTINESTERASE 1-RELATED Lsat_1_v8_lg_4 - View
Malus domestica MD09G1172600 pectin methylesterase 3 Chr09 + View
Malus domestica MD17G1154400 pectin methylesterase 1 Chr17 - View
Manihot esculenta Manes.11G012500 Chromosome11 + View
Manihot esculenta Manes.04G151000 Chromosome04 - View
Medicago truncatula Medtr8g023150 pectinesterase/pectinesterase inhibitor chr8 - View
Nelumbo nucifera Nn8g38511 chr8 + View
Punica granatum PGR119G0854 NC_045132.1 - View
Prunus persica Prupe.3G031000 PTHR31707:SF55 - PECTINESTERASE 2-RELATED Pp03 + View
Pisum sativum Psat4g165240 Pectinesterase chr4LG4 - View
Populus trichocarpa Potri.003G072700 PTHR31707:SF42 - PECTINESTERASE 1-RELATED Chr03 - View
Populus trichocarpa Potri.001G162400 K01051 - pectinesterase (E3.1.1.11) Chr01 + View
Phaseolus vulgaris Phvul.010G123066 PTHR31707:SF55 - PECTINESTERASE 2-RELATED Chr10 + View
Rosa chinensis RcHm_v2.0_Chr2g0147861 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0244700 chr08 - View
Striga asiatica SGA_v2.0_scaffold4G02096 scaffold4 - View
Salvia bowleyana SalBow6G5799 GWHASIU00000002 - View
Salix brachista Sabra03G0043500 GWHAAZH00000003 - View
Salix brachista Sabra01G0130000 GWHAAZH00000001 - View
Sechium edule Sed0015055 LG09 - View
Schrenkiella parvula Sp1g40320 PTHR31707:SF55 - PECTINESTERASE 2-RELATED ch1-2 + View
Selenicereus undatus Hund05702 Scaffold_19641 + View
Trochodendron aralioides TAR624G1370 group9 + View
Theobroma cacao Thecc.06G130200 Pectinesterase 3 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104810394 pectinesterase-like NW_010965216.1 - View
Tarenaya hassleriana THA.LOC104822614 pectinesterase-like NW_010966725.1 + View
Tarenaya hassleriana THA.LOC104816058 pectinesterase 2-like NW_010965696.1 + View
Tripterygium wilfordii TWI23G0515 NC_052239.1 - View
Tripterygium wilfordii TWI14G1402 NC_052249.1 + View
Vaccinium macrocarpon vmacro15088 Similar to MPE3: Pectinesterase 3 (Phaseolus vulgaris OX%3D3885) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G1482 CM024078.1 - View
Vitis vinifera GSVIVG01016667001 chr9 + View