Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC03g15911 ChrC03 - View
BcaC08g47518 ChrC08 - View
BcaB02g07227 ChrB02 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G1390 LG-4 + View
Arabidopsis lyrata AL2G40250 scaffold_2 - View
Arabidopsis thaliana AT1G79580 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division%2C and SMB in turn represses FEZ expression in these cells%2C thereby preventing further stem cell divisions. SOMBRERO (SMB)%3B CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441)%3B BEST Arabidopsis thaliana protein match is: NAC domain containing protein 70 (TAIR:AT4G10350.1)%3B Has 5042 Blast hits to 4339 proteins in 312 species: Archae - 0%3B Bacteria - 299%3B Metazoa - 1017%3B Fungi - 76%3B Plants - 3059%3B Viruses - 0%3B Other Eukaryotes - 591 (source: NCBI BLink). SOMBRERO (SMB)%3B CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441)%3B BEST Arabidopsis thaliana protein match is: NAC domain containing protein 70 (TAIR:AT4G10350.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Brassica napus C06p29790 C06 + View
Brassica napus A07p44610 A07 - View
Brassica napus C02p36740 C02 - View
Brassica napus A02p22990 A02 - View
Brassica napus C06p53450 C06 - View
Brassica napus A07p27050 A07 + View
Brassica oleracea BolC6t38140H C6 + View
Brassica oleracea BolC6t40360H C6 - View
Brassica oleracea BolC2t09677H C2 - View
Brassica rapa BraA07t31970Z A07 - View
Brassica rapa BraA02t07295Z A02 - View
Brassica rapa BraA07t30349Z A07 + View
Camellia sinensis var. sinensis CSS0049662 PREDICTED: NAC transcription factor 29-like [Nelumbo nucifera] Chr15 - View
Cardamine hirsuta CARHR073310 NAC domain-containing protein, putative Chr2 - View
Capsella rubella Carub.0002s2646 PTHR31989:SF48 - PROTEIN SOMBRERO scaffold_2 - View
Eutrema salsugineum Thhalv10019534m.g PTHR31989:SF48 - PROTEIN SOMBRERO scaffold_9 + View
Lactuca sativa Lsat_1_v5_gn_4_86540 Lsat_1_v8_lg_4 + View
Olea europaea Oeu035737.1 chr7 - View
Solanum lycopersicum Solyc06g068580.1 NAC domain-containing protein (AHRD V3.3 *-* A0A2K3MZH6_TRIPR) SL4.0ch06 + View
Schrenkiella parvula Sp5g34640 PTHR31989:SF48 - PROTEIN SOMBRERO ch5-7 - View
Trochodendron aralioides TAR624G0748 group9 + View
Tarenaya hassleriana THA.LOC104812398 protein SOMBRERO NW_010965372.1 - View
Tarenaya hassleriana THA.LOC104808156 protein SOMBRERO-like NW_010964598.1 - View