Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB02g09948 ChrB02 + View
BcaC07g39473 ChrC07 - View
BcaC06g34808 ChrC06 + View
BcaB01g00641 ChrB01 + View
BcaC09g50003 ChrC09 - View
BcaC06g33110 ChrC06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G18460 LG-4 - View
Aethionema arabicum Aa31LG1G15790 LG-1 + View
Actinidia chinensis Actinidia38082 Lachesis_group7 + View
Actinidia chinensis Actinidia16462 Lachesis_group25 + View
Actinidia chinensis Actinidia10194 Lachesis_group26 + View
Actinidia chinensis Actinidia03810 Lachesis_group8 + View
Actinidia chinensis Actinidia08269 Lachesis_group27 + View
Arabidopsis lyrata AL5G30190 scaffold_5 - View
Arabidopsis lyrata AL8G44080 scaffold_8 - View
Avicennia marina MSTRG.3441 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.2854 ScioBoG_102835_HRSCAF_103059 - View
Avicennia marina MSTRG.1055 ScioBoG_102833_HRSCAF_103052 - View
Amaranthus hybridus Ah.02g125470 Cyclin-D5-1 (G1/S-specific cyclin-D5-1) (CycD5 AmaHy_arrow1_Scaffold_2 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.69JDQK PTHR10177:SF216 - CYCLIN-D3-2-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J88HVL K18811 - cyclin D5, plant (CYCD5) arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT3G50070 CYCLIN D3;3 Encode CYCD3%3B3%2C a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. CYCLIN D3%3B3 (CYCD3%3B3)%3B FUNCTIONS IN: cyclin-dependent protein kinase activity%3B INVOLVED IN: regulation of cell cycle%2C regulation of cell proliferation%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclin%2C C-terminal (InterPro:IPR004367)%2C Cyclin D (InterPro:IPR015451)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin-related (InterPro:IPR013763)%2C Cyclin%2C N-terminal (InterPro:IPR006671)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: CYCLIN D3%3B2 (TAIR:AT5G67260.1)%3B Has 3177 Blast hits to 3175 proteins in 306 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1493%3B Fungi - 379%3B Plants - 953%3B Viruses - 3%3B Other Eukaryotes - 349 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G67260 CYCLIN D3;2 Encode CYCD3%3B2%2C a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. CYCLIN D3%3B2 (CYCD3%3B2)%3B FUNCTIONS IN: cyclin-dependent protein kinase activity%3B INVOLVED IN: regulation of cell cycle%2C regulation of cell proliferation%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclin%2C C-terminal (InterPro:IPR004367)%2C Cyclin D (InterPro:IPR015451)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin-related (InterPro:IPR013763)%2C Cyclin%2C N-terminal (InterPro:IPR006671)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: CYCLIN D3%3B3 (TAIR:AT3G50070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0739G055 AmTr_v1.0_scaffold00065 - View
Brassica napus A01p24300 A01 + View
Brassica napus A03p47690 A03 - View
Brassica napus A07p16700 A07 - View
Brassica napus C08p25180 C08 - View
Brassica napus C07p24420 C07 - View
Brassica napus A09p43200 A09 - View
Brassica napus C01p30120 C01 + View
Brassica napus C07p45640 C07 - View
Brassica oleracea BolC7t42962H C7 - View
Brassica oleracea BolC7t45085H C7 - View
Brassica oleracea BolC1t02957H C1 + View
Brassica oleracea BolC8t50137H C8 - View
Brassica rapa BraA07t29393Z A07 - View
Brassica rapa BraA03t13880Z A03 - View
Brassica rapa BraA01t02343Z A01 + View
Brassica rapa BraA09t39790Z A09 - View
Camellia sinensis var. sinensis CSS0039984 PREDICTED: cyclin-D5-1-like [Nelumbo nucifera] Chr1 - View
Corylus avellana Haze_18074 Similar to CYCD3-1: Cyclin-D3-1 (Arabidopsis thaliana OX%3D3702) 7 + View
Corylus avellana Haze_15354 Similar to CYCD3-2: Cyclin-D3-2 (Arabidopsis thaliana OX%3D3702) 11 - View
Citrus clementina Ciclev10003170m.g scaffold_5 + View
Ceratophyllum demersum CDE04G1296 2 - View
Carpinus fangiana Cfa004122 Cfa01 + View
Cardamine hirsuta CARHR280370 CYCLIN D3 Chr8 - View
Cardamine hirsuta CARHR159140 CYCLIN D3 Chr5 - View
Carya illinoinensis CiPaw.07G175600 K18811 - cyclin D5, plant (CYCD5) Chr07 - View
Carya illinoinensis CiPaw.02G006300 PTHR10177//PTHR10177:SF216 - CYCLINE // CYCLIN-D3-2-RELATED Chr02 - View
Citrullus lanatus ClCG01G017510 Cyclin family protein CG_Chr01 + View
Citrullus lanatus ClCG01G017050 Cyclin D3-2 family protein CG_Chr01 + View
Citrullus lanatus ClCG05G020230 Cyclin D CG_Chr05 + View
Cucumis melo MELO3C007628.2 cyclin-D5-1-like chr08 + View
Cucumis melo MELO3C007582.2 cyclin-D3-3 chr08 + View
Carica papaya Cpa.g.sc55.95 supercontig_55 - View
Chenopodium quinoa AUR62003997 CYCD5-1: Cyclin-D5-1 C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0008s2725 K14505 - cyclin D3, plant (CYCD3) scaffold_8 - View
Capsella rubella Carub.0005s1642 K14505 - cyclin D3, plant (CYCD3) scaffold_5 - View
Cucumis sativus L. CsaV3_6G044060 cyclin-D5-1-like chr6 + View
Cucumis sativus L. CsaV3_6G043520 cyclin-D3-3 chr6 + View
Daucus carota DCAR_025795 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_025754 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_021476 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv26861 GWHABJS00000014 + View
Durio zibethinus Duzib093G1842 NW_019167937.1 - View
Durio zibethinus Duzib041G0804 NW_019167826.1 + View
Durio zibethinus Duzib264G0606 NW_019167960.1 - View
Durio zibethinus Duzib116G0633 NW_019167949.1 + View
Durio zibethinus Duzib187G1064 NW_019167860.1 - View
Durio zibethinus Duzib147G0426 NW_019168470.1 - View
Erythranthe guttata Migut.H00355 scaffold_8 - View
Eutrema salsugineum Thhalv10010471m.g K14505 - cyclin D3, plant (CYCD3) scaffold_16 + View
Eutrema salsugineum Thhalv10004441m.g K14505 - cyclin D3, plant (CYCD3) scaffold_6 + View
Fragaria x ananassa FAN28G0494 PTHR10177//PTHR10177:SF216 - CYCLINE // CYCLIN-D3-2-RELATED Fvb1-1 - View
Fragaria x ananassa FAN26G0311 PTHR10177//PTHR10177:SF216 - CYCLINE // CYCLIN-D3-2-RELATED Fvb1-2 + View
Fragaria x ananassa FAN28G2458 PTHR10177:SF255 - CYCLIN-D5-1 Fvb1-1 - View
Fragaria vesca FvH4_1g17530 K18811 - cyclin D5, plant (CYCD5) Fvb1 + View
Fragaria vesca FvH4_1g16680 PTHR10177//PTHR10177:SF216 - CYCLINE // CYCLIN-D3-2-RELATED Fvb1 + View
Gossypium hirsutum Gohir.A10G090700 PTHR10177:SF216 - CYCLIN-D3-2-RELATED A10 - View
Gossypium hirsutum Gohir.D03G025500 PTHR10177:SF216 - CYCLIN-D3-2-RELATED D03 + View
Gossypium hirsutum Gohir.D05G212900 K18811 - cyclin D5, plant (CYCD5) D05 + View
Gossypium hirsutum Gohir.D11G207800 K18811 - cyclin D5, plant (CYCD5) D11 + View
Gossypium hirsutum Gohir.D10G097200 K14505 - cyclin D3, plant (CYCD3) D10 + View
Glycine max Glyma.11G048500 K18811 - cyclin D5, plant (CYCD5) Gm11 - View
Glycine max Glyma.04G045500 K18811 - cyclin D5, plant (CYCD5) Gm04 - View
Glycine max Glyma.01G193400 K18811 - cyclin D5, plant (CYCD5) Gm01 + View
Glycine max Glyma.11G052500 PTHR10177:SF216 - CYCLIN-D3-2-RELATED Gm11 - View
Gossypium raimondii Gorai.009G219400 Chr09 + View
Gossypium raimondii Gorai.011G106700 Chr11 + View
Gossypium raimondii Gorai.003G027100 Chr03 + View
Lupinus albus Lalb_Chr23g0267291 PTHR10177//PTHR10177:SF242 - CYCLINE // SUBFAMILY NOT NAMED Lalb_Chr23 + View
Lupinus albus Lalb_Chr16g0378701 PTHR10177:SF216 - CYCLIN-D3-2-RELATED Lalb_Chr16 + View
Lupinus albus Lalb_Chr11g0062701 PTHR10177//PTHR10177:SF242 - CYCLINE // SUBFAMILY NOT NAMED Lalb_Chr11 + View
Lupinus albus Lalb_Chr05g0213431 PTHR10177:SF216 - CYCLIN-D3-2-RELATED Lalb_Chr05 + View
Lotus japonicus Lj4g0022118 K14505 - cyclin D3, plant (CYCD3) chr4 + View
Lotus japonicus Lj2g0003418 K18811 - cyclin D5, plant (CYCD5) chr2 - View
Lotus japonicus Lj2g0025613 PTHR10177:SF216 - CYCLIN-D3-2-RELATED chr2 - View
Lonicera japonica Lj4C64T4 GWHAAZE00000004 + View
Lonicera japonica Lj7A76T77 GWHAAZE00000007 + View
Malus domestica MD15G1295800 cyclin d5 Chr15 + View
Malus domestica MD02G1184500 cyclin d5 Chr02 + View
Malus domestica MD15G1077100 CYCLIN D3 Chr15 - View
Malus domestica MD02G1178200 CYCLIN D3 Chr02 + View
Malus domestica MD15G1288100 CYCLIN D3 Chr15 + View
Manihot esculenta Manes.13G112400 Chromosome13 - View
Manihot esculenta Manes.18G045900 Chromosome18 + View
Medicago truncatula Medtr5g015670 carboxy-terminal domain cyclin chr5 - View
Medicago truncatula Medtr4g095790 amine-terminal domain cyclin chr4 + View
Nelumbo nucifera Nn5g30621 chr5 + View
Nelumbo nucifera Nn1g04579 chr1 - View
Punica granatum PGR083G0174 NC_045133.1 + View
Punica granatum PGR004G1783 NC_045131.1 + View
Pisum sativum Psat2g171160 Cyclin + N-terminal domain chr2LG1 + View
Populus trichocarpa Potri.002G119000 K18811 - cyclin D5, plant (CYCD5) Chr02 - View
Populus trichocarpa Potri.002G123000 PTHR10177//PTHR10177:SF242 - CYCLINE // SUBFAMILY NOT NAMED Chr02 - View
Populus trichocarpa Potri.005G141900 PTHR10177:SF216 - CYCLIN-D3-2-RELATED Chr05 + View
Populus trichocarpa Potri.007G048300 PTHR10177:SF216 - CYCLIN-D3-2-RELATED Chr07 + View
Phaseolus vulgaris Phvul.009G071400 K18811 - cyclin D5, plant (CYCD5) Chr09 - View
Phaseolus vulgaris Phvul.002G011600 Chr02 - View
Phaseolus vulgaris Phvul.001G024900 PTHR10177//PTHR10177:SF242 - CYCLINE // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.003G240500 PTHR10177:SF216 - CYCLIN-D3-2-RELATED Chr03 - View
Rosa chinensis RcHm_v2.0_Chr2g0107771 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim06G0061900 chr06 + View
Striga asiatica SGA_v2.0_scaffold15G07446 scaffold15 + View
Striga asiatica SGA_v2.0_scaffold15G07363 scaffold15 + View
Salix brachista Sabra07G0043200 GWHAAZH00000007 + View
Simmondsia chinensis Sc02g0007550 GWHAASQ00000002 + View
Sechium edule Sed0026839 LG13 + View
Sechium edule Sed0025703 LG10 + View
Schrenkiella parvula Sp5g12040 K14505 - cyclin D3, plant (CYCD3) ch5-1 + View
Schrenkiella parvula Sp2g29410 K14505 - cyclin D3, plant (CYCD3) ch2-4 - View
Solanum pennellii Sopen02g037540 Encode CYCD3, 2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. | CYCLIN D3, 2 (CYCD3, 2) | FUNCTIONS IN: cyclin-dependent protein kinase activity | INVOLVED IN: regulation of cell cycle, regulation of cell proliferation | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal , Cyclin D , Cyclin-like , Cyclin-related , Cyclin, N-terminal , Cyclin | BEST Arabidopsis thaliana protein match is: CYCLIN D3, 3 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400024984 D-type cyclin family 3 subgroup 1 ST4.03ch02 - View
Theobroma cacao Thecc.01G071700 D5-type cyclin Chromosome_1 + View
Theobroma cacao Thecc.01G062800 D3-type cyclin Chromosome_1 + View
Tarenaya hassleriana THA.LOC104827416 LOW QUALITY PROTEIN: cyclin-D3-2 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104821243 cyclin-D3-2-like NW_010966459.1 - View
Trifolium pratense TPR.G34845 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI56G0140 NC_052242.1 - View
Tripterygium wilfordii TWI09G1483 NC_052245.1 + View
Vigna mungo VMungo1215G0445 CM024074.1 - View