Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC04g19619 ChrC04 + View
BcaC03g13991 ChrC03 - View
BcaC01g06500 ChrC01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.3794 chr3 + View
Arabidopsis lyrata AL8G36230 scaffold_8 + View
Arabidopsis thaliana AT5G59710 VIRE2 interacting protein 2 Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator. VIRE2 interacting protein 2 (VIP2)%3B CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282)%3B BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2)%3B Has 3791 Blast hits to 3038 proteins in 463 species: Archae - 1%3B Bacteria - 1471%3B Metazoa - 837%3B Fungi - 516%3B Plants - 178%3B Viruses - 9%3B Other Eukaryotes - 779 (source: NCBI BLink). Chr5 + View
Brassica napus C03p13350 C03 - View
Brassica napus A02p06940 A02 - View
Brassica napus A10p16940 A10 + View
Brassica napus C02p12240 C02 - View
Brassica napus A03p11540 A03 - View
Brassica oleracea BolC3t13797H C3 - View
Brassica oleracea BolC9t58085H C9 + View
Brassica oleracea BolC2t07327H C2 - View
Brassica rapa BraA02t05774Z A02 - View
Brassica rapa BraA03t10467Z A03 - View
Brassica rapa BraA10t43776Z A10 + View
Corylus avellana Haze_24004 Similar to VIP2: Probable NOT transcription complex subunit VIP2 (Fragment) (Nicotiana benthamiana OX%3D4100) 6 + View
Citrus clementina Ciclev10027964m.g scaffold_8 + View
Cardamine hirsuta CARHR273280 CCR4-NOT transcription complex subunit, putative Chr8 + View
Carya illinoinensis CiPaw.14G074200 K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) Chr14 - View
Capsella rubella Carub.0008s2035 K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) scaffold_8 + View
Durio zibethinus Duzib168G1772 NW_019168159.1 - View
Eutrema salsugineum Thhalv10012986m.g K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) scaffold_2 - View
Fragaria x ananassa FAN11G3854 K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) Fvb3-4 + View
Fragaria vesca FvH4_3g34620 K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) Fvb3 + View
Gossypium hirsutum Gohir.A05G098900 PTHR23326:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2 A05 - View
Glycine max Glyma.13G331400 K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) Gm13 + View
Lonicera japonica Lj2C1048T3 GWHAAZE00000002 + View
Manihot esculenta Manes.04G029100 Chromosome04 + View
Manihot esculenta Manes.11G136600 Chromosome11 - View
Medicago truncatula Medtr2g096180 CCR4-NOT transcription complex subunit 2 chr2 + View
Nelumbo nucifera Nn2g12836 chr2 + View
Quercus lobata QL01p034369 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0062331 RcHm_v2.0_Chr5 + View
Schrenkiella parvula Sp6g21380 K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) ch6-6 + View
Trochodendron aralioides TAR369G0172 group18 - View
Theobroma cacao Thecc.09G330500 NOT2 / NOT3 / NOT5 family Chromosome_9 - View