Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BcaC04g20011 | ChrC04 | + | View | |
BcaB08g36002 | ChrB08 | + | View | |
BcaC03g14182 | ChrC03 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Arabidopsis lyrata | AL8G33040 | scaffold_8 | - | View | |
Aquilegia oxysepala | Aqoxy7G02888 | CHR07 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.V3N0NP | PF05022 - SRP40, C-terminal domain (SRP40_C) | arahy.Tifrunner.gnm1.Arahy.01 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.CB00ZF | PTHR23216//PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 // NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arabidopsis thaliana | AT5G57120 | nucleolar/coiled-body phosphoprotein FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594)%2C SRP40%2C C-terminal (InterPro:IPR007718)%3B Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424%3B Bacteria - 13843%3B Metazoa - 37674%3B Fungi - 9726%3B Plants - 4941%3B Viruses - 569%3B Other Eukaryotes - 34792 (source: NCBI BLink). | Chr5 | - | View |
Brassica napus | C02p14590 | C02 | + | View | |
Brassica napus | A02p08710 | A02 | + | View | |
Brassica napus | C09p48820 | C09 | - | View | |
Brassica napus | A10p14440 | A10 | - | View | |
Brassica oleracea | BolC2t07586H | C2 | + | View | |
Brassica oleracea | BolC9t57729H | C9 | - | View | |
Brassica rapa | BraA10t43535Z | A10 | - | View | |
Brassica rapa | BraA02t05941Z | A02 | + | View | |
Cicer arietinum L. | Ca_21262_v3 | Ca_LG7_v3 | + | View | |
Corylus avellana | Haze_22044 | Protein of unknown function | 3 | + | View |
Carpinus fangiana | Cfa013466 | Cfa05 | + | View | |
Cardamine hirsuta | CARHR270890 | Nucleolar and coiled-body phosphoprotein | Chr8 | - | View |
Carya illinoinensis | CiPaw.08G031700 | Chr08 | - | View | |
Carya illinoinensis | CiPaw.07G198700 | PF05022 - SRP40, C-terminal domain (SRP40_C) | Chr07 | + | View |
Capsella rubella | Carub.0008s1762 | PTHR23216 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | scaffold_8 | - | View |
Daucus carota | DCAR_018014 | hypothetical protein | DCARv2_Chr5 | - | View |
Davidia involucrata | Dinv41195 | GWHABJS00000013 | + | View | |
Davidia involucrata | Dinv25461 | GWHABJS00000001 | - | View | |
Durio zibethinus | Duzib170G1164 | NW_019167871.1 | + | View | |
Erigeron canadensis | ECA234G0353 | Conyza_canadensis_scaffold:4 | - | View | |
Eucalyptus grandis | Eucgr.C02214 | Chr03 | + | View | |
Erythranthe guttata | Migut.L01872 | scaffold_12 | - | View | |
Eutrema salsugineum | Thhalv10013871m.g | PTHR23216 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | scaffold_2 | + | View |
Fragaria x ananassa | FAN07G1770 | PF05022 - SRP40, C-terminal domain (SRP40_C) | Fvb4-4 | + | View |
Fragaria x ananassa | FAN12G2329 | PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | Fvb4-3 | + | View |
Fragaria vesca | FvH4_4g06950 | PF05022 - SRP40, C-terminal domain (SRP40_C) | Fvb4 | - | View |
Glycine max | Glyma.17G058000 | PTHR23216//PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 // NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | Gm17 | - | View |
Glycine max | Glyma.13G101600 | PTHR23216//PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 // NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | Gm13 | + | View |
Helianthus annuus | HanXRQChr10g0308981 | Putative LIS1 homology motif; SRP40, C-terminal | HanXRQChr10 | + | View |
Lupinus albus | Lalb_Chr13g0299851 | PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | Lalb_Chr13 | - | View |
Lotus japonicus | Lj4g0027857 | PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | chr4 | - | View |
Lactuca sativa | Lsat_1_v5_gn_5_83860 | Lsat_1_v8_lg_5 | + | View | |
Malus domestica | MD13G1240600 | Protein of unknown function | Chr13 | + | View |
Malus domestica | MD16G1246300 | Protein of unknown function | Chr16 | - | View |
Medicago truncatula | Medtr4g127160 | SRP40, carboxy-terminal domain protein | chr4 | - | View |
Punica granatum | PGR044G2166 | NC_045134.1 | - | View | |
Prunus persica | Prupe.1G073000 | Pp01 | - | View | |
Pisum sativum | Psat4g014480 | SRP40 + C-terminal domain | chr4LG4 | - | View |
Populus trichocarpa | Potri.018G140200 | PTHR23216//PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 // NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | Chr18 | - | View |
Populus trichocarpa | Potri.006G073100 | PF05022 - SRP40, C-terminal domain (SRP40_C) | Chr06 | - | View |
Phaseolus vulgaris | Phvul.003G140452 | PTHR23216 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | Chr03 | + | View |
Salix brachista | Sabra06G0054500 | GWHAAZH00000006 | - | View | |
Salix brachista | Sabra18G0114500 | GWHAAZH00000018 | - | View | |
Sechium edule | Sed0024384 | LG12 | + | View | |
Sechium edule | Sed0014693 | LG08 | + | View | |
Schrenkiella parvula | Sp6g18850 | PTHR23216:SF0 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 | ch6-6 | - | View |
Tarenaya hassleriana | THA.LOC104813501 | nucleolar and coiled-body phosphoprotein 1-like | NW_010965373.1 | - | View |
Tarenaya hassleriana | THA.LOC104817770 | nucleolar and coiled-body phosphoprotein 1-like isoform X1 | NW_010966021.1 | - | View |
Trifolium pratense | TPR.G5393 | Tp57577_TGAC_v2_LG2 | + | View | |
Vigna mungo | VMungo1215G0729 | CM024074.1 | + | View | |
Vitis vinifera | GSVIVG01029286001 | chr11 | + | View |