Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB01g04352 ChrB01 - View
BcaC01g06388 ChrC01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G11620 LG-3 + View
Actinidia chinensis Actinidia05008 Lachesis_group19 - View
Actinidia chinensis Actinidia30407 Lachesis_group10 + View
Arabidopsis lyrata AL8G31280 scaffold_8 + View
Amaranthus hybridus Ah.04g166560 Inactive beta-amylase 4, chloroplastic (Inactive beta-amylase 6) AmaHy_arrow1_Scaffold_4 + View
Arabidopsis thaliana AT5G55700 beta-amylase 4 In vitro assay indicates no beta-amylase activity of BAM4. However mutation in BAM4 impairs starch breakdown. BAM4 may play a regulatory role. beta-amylase 4 (BAM4)%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C family 14 (InterPro:IPR001554)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C family 14B%2C plant (InterPro:IPR001371)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%3B BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1)%3B Has 805 Blast hits to 802 proteins in 156 species: Archae - 0%3B Bacteria - 86%3B Metazoa - 0%3B Fungi - 0%3B Plants - 654%3B Viruses - 0%3B Other Eukaryotes - 65 (source: NCBI BLink). Chr5 + View
Brassica napus A02p09550 A02 - View
Brassica napus A03p13860 A03 - View
Brassica napus C03p16310 C03 - View
Brassica napus C02p15890 C02 - View
Brassica oleracea BolC2t07692H C2 - View
Brassica oleracea BolC3t14054H C3 - View
Brassica rapa BraA03t10689Z A03 - View
Brassica rapa BraA02t06019Z A02 - View
Corylus avellana Haze_09821 Protein of unknown function 4 + View
Cardamine hirsuta CARHR269020 Beta-amylase 6 Chr8 + View
Capsella rubella Carub.0008s1607 PTHR31352//PTHR31352:SF9 - FAMILY NOT NAMED // INACTIVE BETA-AMYLASE 4, CHLOROPLASTIC scaffold_8 + View
Daucus carota DCAR_022607 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv10331 GWHABJS00000001 + View
Durio zibethinus Duzib213G0365 NW_019167993.1 - View
Eutrema salsugineum Thhalv10013225m.g PTHR31352:SF9 - INACTIVE BETA-AMYLASE 4, CHLOROPLASTIC scaffold_2 - View
Helianthus annuus HanXRQChr05g0159871 Probable beta-amylase 4 HanXRQChr05 - View
Lonicera japonica Lj1C889T5 GWHAAZE00000001 + View
Manihot esculenta Manes.15G060100 Chromosome15 - View
Rhododendron simsii Rhsim06G0229300 chr06 + View
Schrenkiella parvula Sp6g17610 PTHR31352//PTHR31352:SF9 - FAMILY NOT NAMED // INACTIVE BETA-AMYLASE 4, CHLOROPLASTIC ch6-6 + View
Selenicereus undatus Hund23114 Scaffold_33680 - View
Theobroma cacao Thecc.07G014200 Beta-amylase 4 Chromosome_7 - View
Tarenaya hassleriana THA.LOC104811661 inactive beta-amylase 4%2C chloroplastic isoform X1 NW_010965372.1 + View
Vaccinium macrocarpon vmacro11585 Similar to BAM4: Inactive beta-amylase 4, chloroplastic (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01014681001 chr19 + View