Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC03g13241 ChrC03 - View
BcaB07g29702 ChrB07 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G17830 LG-3 + View
Arabidopsis lyrata AL6G19480 scaffold_6 - View
Arabidopsis thaliana AT5G63730 IBR domain-containing protein Encodes ARIADNE14 (ARI14)%2C a putative ubiquitin E3 ligase. ARI14 and an inversely transcribed gene KPL generate a sperm-specific natural cis-antisense siRNA pair. In the absence of KPL%2C ARI14 RNA levels in sperm are increased and fertilization is impaired. ARIADNE 14 (ARI14)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: Regulation of double fertilization forming a zygote and endosperm%3B LOCATED IN: intracellular%3B EXPRESSED IN: male gametophyte%2C flower%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C6HC-type (InterPro:IPR002867)%2C Zinc finger%2C RanBP2-type (InterPro:IPR001876)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G63750.1)%3B Has 1137 Blast hits to 1133 proteins in 199 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 455%3B Fungi - 119%3B Plants - 327%3B Viruses - 0%3B Other Eukaryotes - 236 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G08730 IBR domain-containing protein ARIADNE 16 (ARI16)%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: intracellular%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C6HC-type (InterPro:IPR002867)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%2C Zinc finger%2C RanBP2-type (InterPro:IPR001876)%3B BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT5G63730.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica napus C09p68250 C09 + View
Brassica napus A10p28050 A10 + View
Brassica napus C02p03730 C02 - View
Brassica oleracea BolC9t59573H C9 + View
Brassica oleracea BolC2t06333H C2 - View
Brassica rapa BraA02t04967Z A02 - View
Brassica rapa BraA10t44854Z A10 + View
Cardamine hirsuta CARHR204280 IBR domain-containing protein Chr6 + View
Capsella rubella Carub.0008s2450 K11968 - ariadne-1 (ARIH1) scaffold_8 - View
Capsella rubella Carub.0006s0770 K11968 - ariadne-1 (ARIH1) scaffold_6 - View
Eutrema salsugineum Thhalv10015828m.g PTHR11685:SF135 - E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED scaffold_2 - View
Schrenkiella parvula Sp6g34140 K11968 - ariadne-1 (ARIH1) ch6-6 + View
Tarenaya hassleriana THA.LOC104819354 probable E3 ubiquitin-protein ligase ARI16 NW_010966177.1 + View