Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC06g32237 ChrC06 - View
BcaC09g48136 ChrC09 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G6150 LG-11 - View
Aethionema arabicum Aa31LG3G3890 LG-3 - View
Arabidopsis lyrata AL6G15120 scaffold_6 - View
Arabidopsis lyrata AL3G22440 scaffold_3 - View
Arabidopsis thaliana AT3G10910 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1)%3B Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2174%3B Fungi - 625%3B Plants - 4988%3B Viruses - 47%3B Other Eukaryotes - 1123 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G05280 RING/U-box superfamily protein Encodes a RING-finger E3 ligase protein that controls anther dehiscence by positively regulating the expression of DAD1 in the jasmonic acid biosynthesis pathway. RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica napus A10p30910 A10 + View
Brassica napus C09p71420 C09 + View
Brassica oleracea BolC1t05346H C1 + View
Brassica oleracea BolC9t59905H C9 + View
Brassica rapa BraA01t04216Z A01 + View
Brassica rapa BraA10t45136Z A10 + View
Coffea canephora Cc02_g05400 RING-H2 finger protein ATL72 chr2 - View
Citrus clementina Ciclev10032803m.g scaffold_4 + View
Cardamine hirsuta CARHR207970 Ring finger protein, putative Chr6 + View
Cardamine hirsuta CARHR085480 Ring finger protein, putative Chr3 - View
Capsella rubella Carub.0006s0421 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED scaffold_6 - View
Davidia involucrata Dinv21844 GWHABJS00000004 - View
Eucalyptus grandis Eucgr.J00118 Chr10 - View
Eutrema salsugineum Thhalv10021678m.g PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED scaffold_13 + View
Lonicera japonica Lj8C55G14 GWHAAZE00000008 - View
Manihot esculenta Manes.10G001200 Chromosome10 - View
Punica granatum PGR044G0975 NC_045134.1 + View
Rhododendron simsii Rhsim09G0185700 chr09 + View
Sechium edule Sed0007992 LG04 - View
Sechium edule Sed0026126 LG11 - View
Solanum lycopersicum Solyc06g049030.4 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK74_ARTAN) SL4.0ch06 - View
Schrenkiella parvula Sp3g09230 PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED ch3-1 - View
Tarenaya hassleriana THA.LOC104816685 RING-H2 finger protein ATL73 NW_010965775.1 - View
Tripterygium wilfordii TWI09G1458 NC_052245.1 - View
Tripterygium wilfordii TWI73G1284 NC_052232.1 + View