Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC09g48823 ChrC09 - View
BcaC05g28585 ChrC05 + View
BcaB06g25917 ChrB06 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G5490 LG-8 - View
Arabidopsis lyrata AL3G31980 scaffold_3 - View
Arabidopsis thaliana AT3G18660 plant glycogenin-like starch initiation protein 1 Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch. Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition. plant glycogenin-like starch initiation protein 1 (PGSIP1)%3B FUNCTIONS IN: transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: biosynthetic process%2C starch metabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl transferase%2C family 8 (InterPro:IPR002495)%3B BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 2 (TAIR:AT1G77130.1)%3B Has 1355 Blast hits to 1348 proteins in 306 species: Archae - 0%3B Bacteria - 140%3B Metazoa - 259%3B Fungi - 278%3B Plants - 507%3B Viruses - 75%3B Other Eukaryotes - 96 (source: NCBI BLink). plant glycogenin-like starch initiation protein 1 (PGSIP1)%3B FUNCTIONS IN: transferase activity%2C transferring glycosyl groups%3B INVOLVED IN: biosynthetic process%2C starch metabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycosyl transferase%2C family 8 (InterPro:IPR002495)%3B BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 2 (TAIR:AT1G77130.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr3 - View
Brassica napus A05p30960 A05 + View
Brassica napus C01p45570 C01 + View
Brassica napus C05p46880 C05 + View
Brassica napus A01p35800 A01 + View
Brassica oleracea BolC5t33419H C5 + View
Brassica oleracea BolC1t04519H C1 + View
Brassica rapa BraA05t21938Z A05 + View
Brassica rapa BraA01t03659Z A01 + View
Beta vulgaris EL10Ac6g15272 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Chr6_EL10_PGA_scaffold0 + View
Corylus avellana Haze_25126 Similar to GUX1: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc07_g18060 UDP-glucuronate chr7 + View
Citrus clementina Ciclev10025272m.g scaffold_7 - View
Carpinus fangiana Cfa002829 Cfa01 - View
Cardamine hirsuta CARHR094040 Glycogenin, putative Chr3 - View
Carya illinoinensis CiPaw.03G128500 PTHR11183//PTHR11183:SF56 - GLYCOGENIN // UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Chr03 + View
Citrullus lanatus ClCG01G015520 Glycogenin, putative CG_Chr01 - View
Cucumis melo MELO3C008045.2 Hexosyltransferase chr08 + View
Carica papaya Cpa.g.sc42.119 supercontig_42 + View
Chenopodium quinoa AUR62017917 GUX1: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 C_Quinoa_Scaffold_3086 - View
Chenopodium quinoa AUR62003606 GUX1: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 C_Quinoa_Scaffold_2370 - View
Capsella rubella Carub.0003s1844 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED scaffold_3 - View
Cucumis sativus L. CsaV3_6G041760 Hexosyltransferase chr6 - View
Durio zibethinus Duzib187G0361 NW_019167860.1 - View
Eucalyptus grandis Eucgr.H04942 Chr08 + View
Eutrema salsugineum Thhalv10020243m.g PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED scaffold_13 + View
Fragaria x ananassa FAN26G0395 PTHR11183//PTHR11183:SF56 - GLYCOGENIN // UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Fvb1-2 + View
Fragaria x ananassa FAN19G0679 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Fvb1-4 + View
Fragaria x ananassa FAN23G1522 PTHR11183//PTHR11183:SF56 - GLYCOGENIN // UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Fvb1-3 + View
Fragaria vesca FvH4_1g24050 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Fvb1 + View
Gossypium hirsutum Gohir.D11G060100 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED D11 + View
Glycine max Glyma.06G151900 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Gm06 + View
Glycine max Glyma.04G214400 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Gm04 - View
Gossypium raimondii Gorai.007G064800 Chr07 + View
Gossypium raimondii Gorai.011G116600 Chr11 - View
Manihot esculenta Manes.12G153100 Chromosome12 + View
Medicago truncatula Medtr3g095910 UDP-glucuronate:xylan alpha-glucuronosyltransferase chr3 + View
Punica granatum PGR102G2232 NC_045129.1 + View
Punica granatum PGR083G2309 NC_045133.1 + View
Populus trichocarpa Potri.005G187900 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Chr05 - View
Phaseolus vulgaris Phvul.002G270800 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED Chr02 + View
Quercus lobata QL06p029452 6 - View
Rhododendron simsii Rhsim10G0136900 chr10 - View
Schrenkiella parvula Sp3g16730 PTHR11183:SF56 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED ch3-1 - View
Trochodendron aralioides TAR628G1690 group5 - View
Trochodendron aralioides TAR381G1679 group11 + View
Theobroma cacao Thecc.01G127200 Plant glycogenin-like starch initiation protein 1 Chromosome_1 + View
Tripterygium wilfordii TWI75G0556 NC_052253.1 + View
Vigna mungo VMungo0251G1920 CM024069.1 + View
Vigna mungo VMungo1309G0365 CM024072.1 - View
Vitis vinifera GSVIVG01026525001 chr4 + View