Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB06g28443 ChrB06 + View
BcaC02g11200 ChrC02 - View
BcaB06g28524 ChrB06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G5670 LG-5 - View
Acer truncatum Atru.chr5.1644 chr5 - View
Arabidopsis lyrata AL4G26510 scaffold_4 + View
Arabidopsis lyrata AL1G16100 scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J1N8MB PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT2G31280 transcription factor bHLH155-like protein Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA%2C and can potentially mediate translational regulation of the largest%2C or major%2C ORF (mORF). CPuORF7 represents a conserved upstream opening reading frame relative to major ORF AT2G31280.1 conserved peptide upstream open reading frame 7 (CPUORF7)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06150.2)%3B Has 440 Blast hits to 368 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 436%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G06150 basic helix loop helix (bHLH) DNA-binding superfamily protein EMBRYO DEFECTIVE 1444 (EMB1444)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1)%3B Has 563 Blast hits to 411 proteins in 68 species: Archae - 0%3B Bacteria - 54%3B Metazoa - 32%3B Fungi - 13%3B Plants - 398%3B Viruses - 0%3B Other Eukaryotes - 66 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). Chr1 - View
Brassica napus C04p19320 C04 + View
Brassica napus A05p14490 A05 + View
Brassica napus A04p24100 A04 + View
Brassica napus C04p60810 C04 + View
Brassica oleracea BolC4t23465H C4 + View
Brassica oleracea BolC4t27572H C4 + View
Brassica rapa BraA04t17930Z A04 + View
Brassica rapa BraA05t20380Z A05 + View
Beta vulgaris EL10Ac5g10419 PTHR13902//PTHR13902:SF55 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // TRANSCRIPTION FACTOR EMB1444-RELATED Chr5_EL10_PGA_scaffold2 + View
Corylus avellana Haze_24600 Similar to BHLH155: Transcription factor bHLH155 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc01_g18480 Putative Transcription factor EMB1444 chr1 + View
Citrus clementina Ciclev10018993m.g scaffold_3 + View
Cardamine hirsuta CARHR124870 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr4 + View
Carya illinoinensis CiPaw.03G261800 PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED Chr03 - View
Carya illinoinensis CiPaw.04G185300 PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED Chr04 - View
Chenopodium quinoa AUR62011893 BHLH155: Transcription factor bHLH155 C_Quinoa_Scaffold_2008 + View
Chenopodium quinoa AUR62024734 BHLH155: Transcription factor bHLH155 C_Quinoa_Scaffold_1992 + View
Capsella rubella Carub.0004s1257 PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED scaffold_4 + View
Davidia involucrata Dinv34607 GWHABJS00000010 + View
Durio zibethinus Duzib138G0712 NW_019167893.1 - View
Erigeron canadensis ECA236G3915 Conyza_canadensis_scaffold:3 + View
Eutrema salsugineum Thhalv10016331m.g PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED scaffold_10 + View
Fragaria x ananassa FAN20G2040 PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED Fvb2-3 - View
Fragaria x ananassa FAN15G1929 PTHR13902//PTHR13902:SF55 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // TRANSCRIPTION FACTOR EMB1444-RELATED Fvb2-4 + View
Fragaria x ananassa FAN27G3149 PTHR13902//PTHR13902:SF55 - SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED // TRANSCRIPTION FACTOR EMB1444-RELATED Fvb2-1 + View
Fragaria vesca FvH4_2g21810 PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED Fvb2 + View
Hydrangea macrophylla Hma1.2p1_0273F.1_g109880 Hma1.2p1_0273F.1 + View
Lonicera japonica Lj2A1154T64 GWHAAZE00000002 + View
Lonicera japonica Lj1A64T38 GWHAAZE00000001 - View
Malus domestica MD10G1186300 conserved peptide upstream open reading frame 7 Chr10 + View
Malus domestica MD05G1200100 conserved peptide upstream open reading frame 7 Chr05 + View
Medicago truncatula Medtr7g096650 bHLH transcription factor-like protein chr7 - View
Medicago truncatula Medtr1g070180 bHLH transcription factor-like protein chr1 + View
Punica granatum PGR044G1137 NC_045134.1 + View
Prunus persica Prupe.8G225900 Pp08 + View
Pisum sativum Psat3g058560 BHLH-MYC and R2R3-MYB transcription factors N-terminal chr3LG5 + View
Populus trichocarpa Potri.005G222500 PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED Chr05 - View
Phaseolus vulgaris Phvul.007G194600 Chr07 + View
Quercus lobata QL09p038079 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0288541 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim01G0265700 chr01 + View
Striga asiatica SGA_v2.0_scaffold138G35255 scaffold138 + View
Salix brachista Sabra02G0032300 GWHAAZH00000002 + View
Salix brachista Sabra05G0171200 GWHAAZH00000005 - View
Schrenkiella parvula Sp4g13760 PTHR13902:SF55 - TRANSCRIPTION FACTOR EMB1444-RELATED ch4-6 + View
Theobroma cacao Thecc.01G261200 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104800877 transcription factor bHLH155-like NW_010969548.1 + View
Tripterygium wilfordii TWI12G0684 NC_052243.1 - View
Vaccinium macrocarpon vmacro14848 Similar to EMB1444: Transcription factor EMB1444 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01028300001 chr7 - View