Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC07g40287 ChrC07 + View
BcaC02g10023 ChrC02 + View
BcaC08g44938 ChrC08 + View
BcaC07g40218 ChrC07 + View
BcaB02g07511 ChrB02 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G13310 LG-10 + View
Arabidopsis lyrata AL4G41320 scaffold_4 + View
Arabidopsis lyrata AL5G40470 scaffold_5 + View
Avicennia marina MSTRG.15084 ScioBoG_19538_HRSCAF_19626 - View
Arabidopsis thaliana AT3G58700 Ribosomal L5P family protein Ribosomal L5P family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic ribosome%2C cytosolic large ribosomal subunit%2C vacuole%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%3B BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2)%3B Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312%3B Bacteria - 5083%3B Metazoa - 254%3B Fungi - 163%3B Plants - 278%3B Viruses - 0%3B Other Eukaryotes - 1764 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G42740 ribosomal protein large subunit 16A encodes a cytosolic ribosomal protein L16%2C which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. ribosomal protein large subunit 16A (RPL16A)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C nucleolus%2C chloroplast%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%3B BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2)%3B Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312%3B Bacteria - 5129%3B Metazoa - 255%3B Fungi - 163%3B Plants - 278%3B Viruses - 0%3B Other Eukaryotes - 1764 (source: NCBI BLink). Chr2 + View
Brassica napus C08p34020 C08 + View
Brassica napus A04p02410 A04 - View
Brassica napus C04p33810 C04 - View
Brassica napus A09p51230 A09 + View
Brassica napus C06p25660 C06 + View
Brassica oleracea BolC4t24948H C4 - View
Brassica oleracea BolC8t51001H C8 + View
Brassica oleracea BolC6t37729H C6 + View
Brassica rapa BraA09t40566Z A09 + View
Brassica rapa BraA04t15971Z A04 - View
Cardamine hirsuta CARHR169080 50S ribosomal protein L5 Chr5 + View
Capsella rubella Carub.0005s2549 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) scaffold_5 + View
Eutrema salsugineum Thhalv10006260m.g PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED scaffold_19 - View
Gossypium hirsutum Gohir.D06G137800 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D06 + View
Lonicera japonica Lj8C100G12 GWHAAZE00000008 - View
Petunia axillaris Peaxi162Scf00469g00530 60S ribosomal protein L11-1 Peaxi162Scf00469 + View
Salvia bowleyana SalBow7G1038 GWHASIU00000005 + View
Sechium edule Sed0025716 LG05 - View
Schrenkiella parvula Sp5g04150 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) ch5-1 - View
Tarenaya hassleriana THA.LOC104803021 60S ribosomal protein L11-1 NW_010960188.1 + View
Vitis vinifera GSVIVG01021244001 chr10 + View