Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC05g24353 ChrC05 + View
BcaB03g13455 ChrB03 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G18990 LG-1 + View
Arabidopsis lyrata AL1G15550 scaffold_1 - View
Avicennia marina MSTRG.15041 ScioBoG_19538_HRSCAF_19626 + View
Arabidopsis thaliana AT1G05650 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G05660.1)%3B Has 4025 Blast hits to 4009 proteins in 482 species: Archae - 4%3B Bacteria - 1133%3B Metazoa - 14%3B Fungi - 1282%3B Plants - 1474%3B Viruses - 2%3B Other Eukaryotes - 116 (source: NCBI BLink). Chr1 - View
Brassica napus C05p04020 C05 - View
Brassica napus A10p04400 A10 - View
Brassica napus A08p36350 A08 + View
Brassica oleracea BolC8t47001H C8 - View
Brassica oleracea BolC5t29180H C5 - View
Brassica rapa BraA10t42707Z A10 - View
Brassica rapa BraA08t35539Z A08 + View
Cannabis sativa CANSAT56G0928 NC_044371.1 - View
Cardamine hirsuta CARHR005170 Polygalacturonase, putative Chr1 - View
Cardamine hirsuta CARHR054800 Pectin lyase-like protein Chr2 + View
Cucumis melo MELO3C012916.2 polygalacturonase At1g48100 chr04 + View
Capsella rubella Carub.0001s0499 PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10007830m.g PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED scaffold_5 + View
Trochodendron aralioides TAR365G0628 group16 - View
Tarenaya hassleriana THA.LOC104815875 polygalacturonase-like NW_010965696.1 + View