Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaC01g05712 ChrC01 - View
BcaB06g28862 ChrB06 + View
BcaC02g11691 ChrC02 + View
BcaB02g09399 ChrB02 - View
BcaC02g07680 ChrC02 - View
BcaNung00153 Contig74 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL4G31780 scaffold_4 + View
Arabidopsis thaliana AT2G35700 ERF family protein 38 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism. ERF family protein 38 (ERF38)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G16750.1)%3B Has 5850 Blast hits to 5685 proteins in 248 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5840%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink). Chr2 + View
Brassica napus C03p22940 C03 + View
Brassica napus A03p19680 A03 + View
Brassica napus C04p12310 C04 - View
Brassica napus C04p64660 C04 + View
Brassica napus A04p27140 A04 + View
Brassica oleracea BolC3t14695H C3 + View
Brassica oleracea BolC4t27943H C4 + View
Brassica oleracea BolC4t22878H C4 - View
Brassica rapa BraA01t01976Z A01 + View
Brassica rapa BraA05t19940Z A05 - View
Brassica rapa BraA04t18213Z A04 + View
Brassica rapa BraA03t11223Z A03 + View
Cardamine hirsuta CARHR129940 Ethylene-responsive transcription factor 10 Chr4 + View
Capsella rubella Carub.0004s1743 PTHR31985:SF41 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF038-RELATED scaffold_4 + View
Eutrema salsugineum Thhalv10017258m.g PTHR31985:SF41 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF038-RELATED scaffold_10 + View
Schrenkiella parvula Sp4g17960 PTHR31985//PTHR31985:SF41 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF038-RELATED ch4-6 + View