Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BcaC01g05712 | ChrC01 | - | View | |
BcaB06g28862 | ChrB06 | + | View | |
BcaC02g11691 | ChrC02 | + | View | |
BcaB02g09399 | ChrB02 | - | View | |
BcaC02g07680 | ChrC02 | - | View | |
BcaNung00153 | Contig74 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Arabidopsis lyrata | AL4G31780 | scaffold_4 | + | View | |
Arabidopsis thaliana | AT2G35700 | ERF family protein 38 encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism. ERF family protein 38 (ERF38)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G16750.1)%3B Has 5850 Blast hits to 5685 proteins in 248 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5840%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink). | Chr2 | + | View |
Brassica napus | C03p22940 | C03 | + | View | |
Brassica napus | A03p19680 | A03 | + | View | |
Brassica napus | C04p12310 | C04 | - | View | |
Brassica napus | C04p64660 | C04 | + | View | |
Brassica napus | A04p27140 | A04 | + | View | |
Brassica oleracea | BolC3t14695H | C3 | + | View | |
Brassica oleracea | BolC4t27943H | C4 | + | View | |
Brassica oleracea | BolC4t22878H | C4 | - | View | |
Brassica rapa | BraA01t01976Z | A01 | + | View | |
Brassica rapa | BraA05t19940Z | A05 | - | View | |
Brassica rapa | BraA04t18213Z | A04 | + | View | |
Brassica rapa | BraA03t11223Z | A03 | + | View | |
Cardamine hirsuta | CARHR129940 | Ethylene-responsive transcription factor 10 | Chr4 | + | View |
Capsella rubella | Carub.0004s1743 | PTHR31985:SF41 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF038-RELATED | scaffold_4 | + | View |
Eutrema salsugineum | Thhalv10017258m.g | PTHR31985:SF41 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF038-RELATED | scaffold_10 | + | View |
Schrenkiella parvula | Sp4g17960 | PTHR31985//PTHR31985:SF41 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF038-RELATED | ch4-6 | + | View |