Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Atru.chr6.2509 chr6 + View
Atru.chr11.2277 chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G18650 LG-1 + View
Actinidia chinensis Actinidia16181 Lachesis_group13 - View
Arabidopsis lyrata AL8G40440 scaffold_8 - View
Avicennia marina MSTRG.4591 ScioBoG_102837_HRSCAF_103074 - View
Avicennia marina MSTRG.22911 ScioBoG_3703_HRSCAF_3719 + View
Aquilegia oxysepala Aqoxy5G03497 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DK6AU1 PTHR23359//PTHR23359:SF99//PTHR24096//PTHR24096:SF251 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED // FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT5G63380 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal %26#946%3B-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein%3B CONTAINS InterPro DOMAIN/s: AMP-binding%2C conserved site (InterPro:IPR020845)%2C AMP-dependent synthetase/ligase (InterPro:IPR000873)%3B BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1)%3B Has 81844 Blast hits to 74712 proteins in 3773 species: Archae - 1219%3B Bacteria - 53606%3B Metazoa - 3425%3B Fungi - 4605%3B Plants - 2698%3B Viruses - 1%3B Other Eukaryotes - 16290 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g18199 ChrC03 - View
Beta vulgaris EL10As4g23446 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Scaffold_0004 + View
Camellia sinensis var. sinensis CSS0006819 PREDICTED: 4-coumarate--CoA ligase-like 9 [Vitis vinifera] Chr15 + View
Camellia sinensis var. sinensis CSS0050421 PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] Chr2 - View
Capsicum annuum CAN.G352.34 PGAv.1.6.scaffold352 + View
Cannabis sativa CANSAT64G0055 NC_044379.1 - View
Corylus avellana Haze_07248 Similar to 4CLL9: 4-coumarate--CoA ligase-like 9 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc04_g09970 4-coumarate--CoA ligase-like 9 chr4 - View
Coffea canephora Cc11_g16670 Putative 4-coumarate--CoA ligase-like 5 chr11 + View
Citrus clementina Ciclev10031145m.g scaffold_4 - View
Citrus clementina Ciclev10019547m.g scaffold_3 - View
Carpinus fangiana Cfa007257 Cfa03 + View
Carpinus fangiana Cfa018865 Cfa08 + View
Cardamine hirsuta CARHR277210 4-coumarate-coa ligase Chr8 - View
Carya illinoinensis CiPaw.12G036900 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 Chr12 - View
Carya illinoinensis CiPaw.11G010300 PF00501//PF13193 - AMP-binding enzyme (AMP-binding) // AMP-binding enzyme C-terminal domain (AMP-binding_C) Chr11 + View
Citrullus lanatus ClCG03G003610 4-coumarate-CoA ligase CG_Chr03 - View
Cucumis melo MELO3C035535.2 4-coumarate-CoA ligase chr12 + View
Corchorus olitorius COL.COLO4_28064 AMP-dependent synthetase/ligase AWUE01019745.1 - View
Chenopodium quinoa AUR62025898 AEE22: Probable acyl-activating enzyme 22 C_Quinoa_Scaffold_1534 - View
Capsella rubella Carub.0008s2409 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 scaffold_8 - View
Cucumis sativus L. CsaV3_1G009460 4-coumarate-CoA ligase chr1 - View
Daucus carota DCAR_016411 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_026214 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv33370 GWHABJS00000014 - View
Davidia involucrata Dinv04855 GWHABJS00000019 - View
Davidia involucrata Dinv10987 GWHABJS00000008 + View
Durio zibethinus Duzib068G0011 NW_019167838.1 - View
Durio zibethinus Duzib205G1933 NW_019168381.1 - View
Erigeron canadensis ECA236G2888 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA233G2454 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA232G2010 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.K02743 Chr11 + View
Erythranthe guttata Migut.D01239 scaffold_4 - View
Erythranthe guttata Migut.I00520 scaffold_9 + View
Erythranthe guttata Migut.K00705 scaffold_11 + View
Eutrema salsugineum Thhalv10003983m.g PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 scaffold_6 + View
Fragaria x ananassa FAN08G1607 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Fvb5-3 + View
Fragaria x ananassa FAN18G4397 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Fvb5-1 - View
Fragaria x ananassa FAN13G2900 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Fvb5-2 - View
Fragaria x ananassa FAN07G0143 KOG1176 - Acyl-CoA synthetase Fvb4-4 + View
Fragaria x ananassa FAN04G2991 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 Fvb5-4 - View
Fragaria x ananassa FAN12G3789 KOG1176 - Acyl-CoA synthetase Fvb4-3 + View
Fragaria vesca FvH4_5g07750 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 Fvb5 - View
Gossypium hirsutum Gohir.A11G035700 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 A11 - View
Gossypium hirsutum Gohir.A07G052800 PTHR24096//PTHR24096:SF160//PTHR24096:SF251 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 A07 + View
Gossypium hirsutum Gohir.A09G246000 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 A09 - View
Gossypium hirsutum Gohir.D07G057200 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 D07 + View
Gossypium hirsutum Gohir.D11G039300 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 D11 - View
Glycine max Glyma.04G194200 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 Gm04 - View
Gossypium raimondii Gorai.001G060700 Chr01 + View
Gossypium raimondii Gorai.007G042200 Chr07 - View
Gossypium raimondii Gorai.006G271000 Chr06 + View
Helianthus annuus HanXRQChr08g0207531 Putative AMP-dependent synthetase/ligase; AMP-binding enzyme C-terminal domain HanXRQChr08 + View
Helianthus annuus HanXRQChr09g0272971 Probable AMP-dependent synthetase and ligase family protein HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0014F.1_g009750 Hma1.2p1_0014F.1 + View
Lotus japonicus Lj1g0008000 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 chr1 + View
Lonicera japonica Lj9A476G59 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_4_76461 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Lsat_1_v8_lg_0 - View
Magnolia biondii MBI11_g16503_MAGBIO AED:0.44 Chr11 + View
Malus domestica MD06G1147300 AMP-dependent synthetase and ligase family protein Chr06 + View
Malus domestica MD13G1113700 AMP-dependent synthetase and ligase family protein Chr13 + View
Malus domestica MD14G1161200 AMP-dependent synthetase and ligase family protein Chr14 - View
Malus domestica MD16G1112900 AMP-dependent synthetase and ligase family protein Chr16 + View
Manihot esculenta Manes.06G117400 Chromosome06 - View
Manihot esculenta Manes.14G053850 Chromosome14 + View
Medicago truncatula Medtr3g088890 4-coumarate:CoA ligase, putative chr3 - View
Nelumbo nucifera Nn3g16530 chr3 + View
Nicotiana tabacum Nitab4.5_0001664g0060 AMP-dependent synthetase/ligase, AMP-binding enzyme C-terminal domain, AMP-binding, conserved site Nitab4.5_0001664 + View
Olea europaea Oeu006371.1 chr18 + View
Oryza sativa ssp. japonica Os01g0901500 Similar to 4-coumarate--CoA ligase-like 5. chr01 + View
Petunia axillaris Peaxi162Scf00089g00045 4-coumarate:CoA ligase 2 Peaxi162Scf00089 - View
Punica granatum PGR044G0167 NC_045134.1 - View
Punica granatum PGR083G2761 NC_045133.1 + View
Prunus persica Prupe.5G154000 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Pp05 + View
Populus trichocarpa Potri.012G094800 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 Chr12 - View
Populus trichocarpa Potri.015G092300 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 Chr15 - View
Phaseolus vulgaris Phvul.009G167700 PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Chr09 + View
Quercus lobata QL02p072496 CM012294 - View
Quercus lobata QL10p004496 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0190671 RcHm_v2.0_Chr7 + View
Salvia bowleyana SalBow1G1292 GWHASIU00000001 - View
Salix brachista Sabra15G0114100 GWHAAZH00000015 - View
Salix brachista Sabra12G0069500 GWHAAZH00000012 - View
Simmondsia chinensis Sc03g0006830 GWHAASQ00000003 - View
Simmondsia chinensis Sc10g0010380 GWHAASQ00000010 - View
Sechium edule Sed0024012 LG01 - View
Sechium edule Sed0009918 LG08 + View
Solanum lycopersicum Solyc03g111170.3 4-coumarate-CoA ligase (AHRD V3.3 *** E5GBV5_CUCME) SL4.0ch03 - View
Schrenkiella parvula Sp2g26470 PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 ch2-4 - View
Solanum pennellii Sopen03g030320 Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal, #946, -oxidation steps of jasmonic acid biosynthesis. | AMP-dependent synthetase and ligase family protein | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400015190 AMP dependent CoA ligase ST4.03ch03 - View
Trochodendron aralioides TAR374G0540 group12 - View
Trochodendron aralioides TAR622G0162 group8 + View
Theobroma cacao Thecc.02G275100 AMP dependent CoA ligase Chromosome_2 + View
Theobroma cacao Thecc.03G125200 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104799669 4-coumarate--CoA ligase-like 9 NW_010968505.1 + View
Tripterygium wilfordii TWI39G0411 NC_052250.1 - View
Tripterygium wilfordii TWI14G0164 NC_052249.1 - View
Vaccinium macrocarpon vmacro19224 Similar to 4CLL9: 4-coumarate--CoA ligase-like 9 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01079 Similar to 4CLL9: 4-coumarate--CoA ligase-like 9 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01010358001 chr1 + View
Vitis vinifera GSVIVG01008498001 chr17 + View
Vitis vinifera GSVIVG01001826001 chr14 - View