Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Arabidopsis lyrata | AL3G37990 | scaffold_3 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.AWD6JN | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | arahy.Tifrunner.gnm1.Arahy.12 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.K3U1RD | PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) | arahy.Tifrunner.gnm1.Arahy.12 | + | View |
Arabidopsis thaliana | AT3G23330 | Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1)%3B Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 50%3B Fungi - 109%3B Plants - 37267%3B Viruses - 0%3B Other Eukaryotes - 609 (source: NCBI BLink). | Chr3 | + | View |
Beta vulgaris | EL10Ac5g10418 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Chr5_EL10_PGA_scaffold2 | + | View |
Beta vulgaris | EL10Ac3g04993 | KOG3485 - Uncharacterized conserved protein | Chr3_EL10_PGA_scaffold7 | - | View |
Camellia sinensis var. sinensis | CSS0017325 | PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like [Vitis vinifera] | Chr13 | + | View |
Capsicum annuum | CAN.G1634.10 | PGAv.1.6.scaffold1634 | + | View | |
Coffea canephora | Cc03_g05650 | Putative pentatricopeptide repeat-containing protein At3g23330 | chr3 | + | View |
Citrus clementina | Ciclev10006568m.g | scaffold_9 | + | View | |
Ceratophyllum demersum | CDE02G1675 | 1 | + | View | |
Ceratophyllum demersum | CDE09G0011 | 7 | - | View | |
Cardamine hirsuta | CARHR249300 | Pentatricopeptide repeat-containing protein, putative | Chr8 | + | View |
Cardamine hirsuta | CARHR099300 | Pentatricopeptide repeat-containing protein | Chr3 | + | View |
Carya illinoinensis | CiPaw.08G095000 | K03452 - magnesium/proton exchanger (MHX) | Chr08 | - | View |
Citrullus lanatus | ClCG07G000940 | Pentatricopeptide repeat-containing family protein | CG_Chr07 | - | View |
Chenopodium quinoa | AUR62015556 | PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 | C_Quinoa_Scaffold_2751 | - | View |
Chenopodium quinoa | AUR62011891 | PCMP-E57: Pentatricopeptide repeat-containing protein At1g33350 | C_Quinoa_Scaffold_2008 | + | View |
Chenopodium quinoa | AUR62024732 | PCMP-E57: Pentatricopeptide repeat-containing protein At1g33350 | C_Quinoa_Scaffold_1992 | + | View |
Capsella rubella | Carub.0003s2358 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | scaffold_3 | + | View |
Cucumis sativus L. | CsaV3_3G022560 | pentatricopeptide repeat-containing protein At1g06145-like | chr3 | + | View |
Davidia involucrata | Dinv22444 | GWHABJS00000007 | + | View | |
Durio zibethinus | Duzib138G1534 | NW_019167893.1 | - | View | |
Eucalyptus grandis | Eucgr.K03486 | Chr11 | + | View | |
Erythranthe guttata | Migut.N00280 | scaffold_14 | + | View | |
Fragaria x ananassa | FAN17G2829 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Fvb4-2 | - | View |
Fragaria x ananassa | FAN20G1831 | PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) | Fvb2-3 | + | View |
Fragaria x ananassa | FAN24G0008 | PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) | Fvb2-2 | + | View |
Fragaria vesca | FvH4_4g03820 | PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) | Fvb4 | + | View |
Glycine max | Glyma.02G006900 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Gm02 | + | View |
Glycine max | Glyma.10G018100 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | Gm10 | - | View |
Glycine max | Glyma.03G161200 | PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) | Gm03 | + | View |
Helianthus annuus | HanXRQChr04g0114041 | Probable tetratricopeptide repeat (TPR)-like superfamily protein | HanXRQChr04 | + | View |
Helianthus annuus | HanXRQChr10g0280791 | Probable tetratricopeptide repeat (TPR)-like superfamily protein | HanXRQChr10 | - | View |
Helianthus annuus | HanXRQChr03g0091551 | Putative tetratricopeptide-like helical domain | HanXRQChr03 | + | View |
Hydrangea macrophylla | Hma1.2p1_0273F.1_g109900 | Hma1.2p1_0273F.1 | + | View | |
Lupinus albus | Lalb_Chr01g0019561 | K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) | Lalb_Chr01 | - | View |
Lonicera japonica | Lj7C530G8 | GWHAAZE00000007 | + | View | |
Malus domestica | MD05G1200200 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr05 | - | View |
Malus domestica | MD12G1245600 | Pentatricopeptide repeat (PPR) superfamily protein | Chr12 | - | View |
Manihot esculenta | Manes.13G032100 | Chromosome13 | - | View | |
Manihot esculenta | Manes.12G035400 | Chromosome12 | + | View | |
Manihot esculenta | Manes.09G149300 | Chromosome09 | + | View | |
Manihot esculenta | Manes.15G041900 | Chromosome15 | + | View | |
Olea europaea | Oeu024510.1 | chr11 | + | View | |
Punica granatum | PGR119G1872 | NC_045132.1 | - | View | |
Prunus persica | Prupe.1G040600 | PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) | Pp01 | + | View |
Papaver somniferum | PSO210G5447 | NC_039359.1 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr4g0393661 | RcHm_v2.0_Chr4 | + | View | |
Salvia bowleyana | SalBow4G1958 | GWHASIU00000008 | - | View | |
Simmondsia chinensis | Sc17g0000750 | GWHAASQ00000017 | + | View | |
Sechium edule | Sed0005411 | LG05 | - | View | |
Sapria himalayana | SHI09854 | scaffold10_15062905 | - | View | |
Solanum lycopersicum | Solyc03g005800.4 | UDP-N-acetylglucosamine transferase subunit ALG14 (AHRD V3.3 *** A0A2K3NM56_TRIPR) | SL4.0ch03 | + | View |
Schrenkiella parvula | Sp3g21000 | PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) | ch3-1 | + | View |
Solanum pennellii | Sopen09g033130 | Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 | Spenn-ch09 | + | View |
Selenicereus undatus | Hund09594 | Scaffold_10417 | - | View | |
Trochodendron aralioides | TAR365G0547 | group16 | + | View | |
Trifolium pratense | TPR.G30355 | Tp57577_TGAC_v2_LG6 | + | View | |
Tripterygium wilfordii | TWI36G1070 | NC_052237.1 | - | View | |
Tripterygium wilfordii | TWI75G1565 | NC_052253.1 | - | View | |
Tripterygium wilfordii | TWI18G1218 | NC_052241.1 | + | View | |
Vaccinium macrocarpon | vmacro08499 | Similar to PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 (Arabidopsis thaliana OX%3D3702) | chr6_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vaccinium macrocarpon | vmacro02682 | Similar to PCMP-H44: Pentatricopeptide repeat-containing protein At2g03880, mitochondrial (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vanilla planifolia | HPP92_013558 | Pentatricopeptide repeat-containing protein *** | CM028155.1 | - | View |
Vitis vinifera | GSVIVG01021789001 | chr14 | - | View |