Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr5.964 | chr5 | + | View | |
Actinidia chinensis | Actinidia19075 | Lachesis_group9 | - | View | |
Avicennia marina | MSTRG.18086 | ScioBoG_22153_HRSCAF_22259 | + | View | |
Avicennia marina | MSTRG.21704 | ScioBoG_26769_HRSCAF_26899 | - | View | |
Aquilegia oxysepala | Aqoxy2G02692 | CHR02 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.R0SDX6 | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | arahy.Tifrunner.gnm1.Arahy.06 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.26UA7Y | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | arahy.Tifrunner.gnm1.Arahy.16 | - | View |
Arabidopsis thaliana | AT2G47310 | flowering time control protein-related / FCA gamma-like protein flowering time control protein-related / FCA gamma-related%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C WW/Rsp5/WWP (InterPro:IPR001202)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA binding%3Babscisic acid binding (TAIR:AT4G16280.4)%3B Has 13219 Blast hits to 10590 proteins in 472 species: Archae - 0%3B Bacteria - 420%3B Metazoa - 8082%3B Fungi - 1429%3B Plants - 2128%3B Viruses - 0%3B Other Eukaryotes - 1160 (source: NCBI BLink). | Chr2 | + | View |
Brassica carinata | BcaB06g29453 | ChrB06 | - | View | |
Brassica carinata | BcaC01g05037 | ChrC01 | - | View | |
Brassica napus | C03p30890 | C03 | + | View | |
Brassica oleracea | BolC3t15441H | C3 | + | View | |
Beta vulgaris | EL10As5g23564 | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | Scaffold_0005 | - | View |
Camellia sinensis var. sinensis | CSS0029739 | PREDICTED: flowering time control protein FCA [Sesamum indicum] | Chr11 | + | View |
Cannabis sativa | CANSAT25G3309 | NC_044370.1 | - | View | |
Cicer arietinum L. | Ca_09222_v3 | Ca_LG3_v3 | - | View | |
Citrus clementina | Ciclev10019644m.g | scaffold_3 | - | View | |
Carpinus fangiana | Cfa005762 | Cfa02 | + | View | |
Cardamine hirsuta | CARHR142700 | Cugbp, Elav-like family member 5 | Chr4 | + | View |
Carya illinoinensis | CiPaw.07G119600 | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | Chr07 | - | View |
Cucumis melo | MELO3C012931.2 | flowering time control protein FCA | chr04 | + | View |
Carica papaya | Cpa.g.sc18.84 | supercontig_18 | - | View | |
Chenopodium quinoa | AUR62011774 | FCA: Flowering time control protein FCA | C_Quinoa_Scaffold_2008 | + | View |
Chenopodium quinoa | AUR62024617 | FCA: Flowering time control protein FCA | C_Quinoa_Scaffold_1992 | + | View |
Cucumis sativus L. | CsaV3_3G026590 | flowering time control protein FCA | chr3 | + | View |
Daucus carota | DCAR_002884 | hypothetical protein | DCARv2_Chr1 | + | View |
Davidia involucrata | Dinv10122 | GWHABJS00000007 | + | View | |
Durio zibethinus | Duzib138G0012 | NW_019167893.1 | + | View | |
Eutrema salsugineum | Thhalv10001438m.g | PTHR24012:SF382 - FLOWERING TIME CONTROL PROTEIN FCA-RELATED | scaffold_22 | + | View |
Fragaria x ananassa | FAN19G1491 | PTHR24012:SF382 - FLOWERING TIME CONTROL PROTEIN FCA-RELATED | Fvb1-4 | + | View |
Gossypium hirsutum | Gohir.A07G129200 | PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED | A07 | - | View |
Gossypium hirsutum | Gohir.D07G133600 | PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED | D07 | - | View |
Glycine max | Glyma.19G217900 | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | Gm19 | - | View |
Gossypium raimondii | Gorai.001G144900 | Chr01 | - | View | |
Lupinus albus | Lalb_Chr15g0077991 | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | Lalb_Chr15 | - | View |
Lotus japonicus | Lj1g0027953 | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | chr1 | - | View |
Malus domestica | MD09G1285500 | flowering time control protein-related / FCA gamma-related | Chr09 | - | View |
Manihot esculenta | Manes.15G001500 | Chromosome15 | + | View | |
Medicago truncatula | Medtr7g109810 | flowering time control FCA-like protein | chr7 | - | View |
Prunus persica | Prupe.3G008500 | K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) | Pp03 | + | View |
Pisum sativum | Psat3g019280 | RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) | chr3LG5 | + | View |
Populus trichocarpa | Potri.002G192900 | PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED | Chr02 | + | View |
Phaseolus vulgaris | Phvul.001G214500 | Chr01 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr3g0487191 | RcHm_v2.0_Chr3 | + | View | |
Rhododendron simsii | Rhsim13G0003200 | chr13 | + | View | |
Striga asiatica | SGA_v2.0_scaffold376G50291 | scaffold376 | - | View | |
Salix brachista | Sabra10G0114000 | GWHAAZH00000010 | - | View | |
Salix brachista | Sabra02G0163000 | GWHAAZH00000002 | - | View | |
Salix brachista | Sabra14G0087600 | GWHAAZH00000014 | + | View | |
Simmondsia chinensis | Sc17g0000320 | GWHAASQ00000017 | + | View | |
Schrenkiella parvula | Sp4g29260 | KOG0131//KOG0148 - Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) | ch4-6 | + | View |
Theobroma cacao | Thecc.01G316900 | RNA binding | Chromosome_1 | - | View |
Trifolium pratense | TPR.G4031 | Tp57577_TGAC_v2_LG6 | + | View | |
Tripterygium wilfordii | TWI36G1783 | NC_052237.1 | - | View | |
Vaccinium macrocarpon | vmacro02387 | Similar to FCA: Flowering time control protein FCA (Oryza sativa subsp. indica OX%3D39946) | chr9_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1383G3554 | CM024070.1 | - | View |