Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g113370 AmaHy_arrow1_Scaffold_2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G11090 LG-4 - View
Acer truncatum Atru.chr9.2266 chr9 + View
Actinidia chinensis Actinidia31202 Lachesis_group12 + View
Actinidia chinensis Actinidia37636 Lachesis_group13 + View
Arabidopsis lyrata AL2G28860 scaffold_2 + View
Avicennia marina MSTRG.4421 ScioBoG_102837_HRSCAF_103074 - View
Avicennia marina MSTRG.694 ScioBoG_102831_HRSCAF_103044 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q9YRAB PF03634 - TCP family transcription factor (TCP) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6V3SWS PF03634 - TCP family transcription factor (TCP) arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT3G47620 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo%2C and affects gene expression in radicles in a non-cell-autonomous manner. TEOSINTE BRANCHED%2C cycloidea and PCF (TCP) 14 (TCP14)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1)%3B Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2%3B Bacteria - 69%3B Metazoa - 397%3B Fungi - 50%3B Plants - 507%3B Viruses - 0%3B Other Eukaryotes - 133 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G69690 TCP family transcription factor AtTCP15 is involved in the regulation of endoreduplication. TCP family transcription factor %3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED%2C cycloidea and PCF (TCP) 14 (TAIR:AT3G47620.1)%3B Has 863 Blast hits to 861 proteins in 131 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 120%3B Fungi - 15%3B Plants - 698%3B Viruses - 0%3B Other Eukaryotes - 24 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC01g01794 ChrC01 - View
Brassica carinata BcaB03g14746 ChrB03 + View
Brassica napus C03p71830 C03 + View
Brassica napus A07p36110 A07 + View
Brassica napus A06p20000 A06 - View
Brassica oleracea BolC3t19471H C3 + View
Brassica oleracea BolC6t39422H C6 + View
Brassica rapa BraA07t31187Z A07 + View
Brassica rapa BraA06t25086Z A06 - View
Beta vulgaris EL10Ac5g10982 PF03634 - TCP family transcription factor (TCP) Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0029405 PREDICTED: transcription factor TCP14 [Nelumbo nucifera] Chr12 + View
Capsicum annuum CAN.G628.26 PGAv.1.6.scaffold628 + View
Cicer arietinum L. Ca_21828_v3 Ca_LG7_v3 + View
Corylus avellana Haze_07340 Similar to TCP14: Transcription factor TCP14 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc11_g13150 Putative BHLH (Fragment) chr11 + View
Citrus clementina Ciclev10020275m.g scaffold_3 + View
Carpinus fangiana Cfa018958 Cfa08 + View
Cardamine hirsuta CARHR062680 TCP family transcription factor Chr2 + View
Carya illinoinensis CiPaw.12G014100 PF03634 - TCP family transcription factor (TCP) Chr12 + View
Carya illinoinensis CiPaw.06G083400 PTHR31072:SF33 - TRANSCRIPTION FACTOR TCP15 Chr06 - View
Carya illinoinensis CiPaw.11G042900 PF03634 - TCP family transcription factor (TCP) Chr11 - View
Citrullus lanatus ClCG04G012380 TCP transcription factor 17 CG_Chr04 + View
Citrullus lanatus ClCG05G024370 TCP family transcription factor-like protein CG_Chr05 + View
Citrullus lanatus ClCG06G016250 TCP transcription factor 17 CG_Chr06 + View
Cucumis melo MELO3C012086.2 transcription factor TCP15 chr10 + View
Cucumis melo MELO3C017168.2 transcription factor TCP14 chr02 + View
Cucumis melo MELO3C001972.2 transcription factor TCP15-like chr12 + View
Chenopodium quinoa AUR62008388 TCP14: Transcription factor TCP14 C_Quinoa_Scaffold_3422 - View
Capsella rubella Carub.0002s1635 PTHR31072//PTHR31072:SF33 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP15 scaffold_2 + View
Capsella rubella Carub.0005s1375 PTHR31072:SF29 - TRANSCRIPTION FACTOR TCP14 scaffold_5 + View
Cucumis sativus L. CsaV3_1G002280 Transcription factor chr1 - View
Cucumis sativus L. CsaV3_5G032590 transcription factor TCP15 chr5 - View
Daucus carota DCAR_021524 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_016540 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_031027 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv16633 GWHABJS00000018 - View
Davidia involucrata Dinv19949 GWHABJS00000006 + View
Durio zibethinus Duzib068G0007 NW_019167838.1 - View
Durio zibethinus Duzib251G0008 NW_019167971.1 + View
Durio zibethinus Duzib084G1417 NW_019167827.1 - View
Durio zibethinus Duzib205G1598 NW_019168381.1 - View
Durio zibethinus Duzib268G0342 NW_019168270.1 + View
Erigeron canadensis ECA246G5143 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA232G1504 Conyza_canadensis_scaffold:2 - View
Erythranthe guttata Migut.D01829 scaffold_4 + View
Erythranthe guttata Migut.L01307 scaffold_12 + View
Fragaria x ananassa FAN13G3314 PF03634 - TCP family transcription factor (TCP) Fvb5-2 + View
Fragaria x ananassa FAN18G1488 PF03634 - TCP family transcription factor (TCP) Fvb5-1 + View
Fragaria x ananassa FAN17G2088 PTHR31072:SF33 - TRANSCRIPTION FACTOR TCP15 Fvb4-2 - View
Fragaria x ananassa FAN07G2340 PTHR31072:SF33 - TRANSCRIPTION FACTOR TCP15 Fvb4-4 - View
Fragaria x ananassa FAN04G0488 PF03634 - TCP family transcription factor (TCP) Fvb5-4 + View
Fragaria x ananassa FAN22G1053 PTHR31072//PTHR31072:SF33 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP15 Fvb4-1 + View
Fragaria x ananassa FAN08G1184 PF03634 - TCP family transcription factor (TCP) Fvb5-3 - View
Fragaria vesca FvH4_5g15150 PF03634 - TCP family transcription factor (TCP) Fvb5 + View
Gossypium hirsutum Gohir.D12G168800 PTHR31072//PTHR31072:SF33 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP15 D12 + View
Gossypium hirsutum Gohir.D11G034000 PF03634 - TCP family transcription factor (TCP) D11 - View
Gossypium hirsutum Gohir.A11G030701 PF03634 - TCP family transcription factor (TCP) A11 - View
Gossypium hirsutum Gohir.D07G068700 PF03634 - TCP family transcription factor (TCP) D07 + View
Gossypium hirsutum Gohir.A07G063900 PF03634 - TCP family transcription factor (TCP) A07 + View
Gossypium hirsutum Gohir.A13G073700 PTHR31072//PTHR31072:SF33 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP15 A13 - View
Gossypium hirsutum Gohir.D12G179300 PF03634 - TCP family transcription factor (TCP) D12 - View
Gossypium hirsutum Gohir.A12G176600 PF03634 - TCP family transcription factor (TCP) A12 - View
Gossypium hirsutum Gohir.A12G165700 PTHR31072//PTHR31072:SF33 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP15 A12 + View
Glycine max Glyma.01G045500 PF03634 - TCP family transcription factor (TCP) Gm01 - View
Glycine max Glyma.18G121400 PF03634 - TCP family transcription factor (TCP) Gm18 + View
Glycine max Glyma.04G170600 PTHR31072:SF29 - TRANSCRIPTION FACTOR TCP14 Gm04 + View
Glycine max Glyma.17G099100 PF03634 - TCP family transcription factor (TCP) Gm17 - View
Glycine max Glyma.06G193000 PTHR31072:SF29 - TRANSCRIPTION FACTOR TCP14 Gm06 - View
Glycine max Glyma.02G105900 PF03634 - TCP family transcription factor (TCP) Gm02 - View
Glycine max Glyma.08G299400 PF03634 - TCP family transcription factor (TCP) Gm08 - View
Glycine max Glyma.05G027400 PF03634 - TCP family transcription factor (TCP) Gm05 + View
Gossypium raimondii Gorai.007G036800 Chr07 - View
Gossypium raimondii Gorai.008G192400 Chr08 - View
Gossypium raimondii Gorai.001G072200 Chr01 + View
Gossypium raimondii Gorai.008G181600 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0104F.1_g050010 Hma1.2p1_0104F.1 + View
Lupinus albus Lalb_Chr17g0340581 PF03634 - TCP family transcription factor (TCP) Lalb_Chr17 - View
Lupinus albus Lalb_Chr07g0177981 PF03634 - TCP family transcription factor (TCP) Lalb_Chr07 - View
Lupinus albus Lalb_Chr12g0196841 PF03634 - TCP family transcription factor (TCP) Lalb_Chr12 - View
Lupinus albus Lalb_Chr13g0303291 PF03634 - TCP family transcription factor (TCP) Lalb_Chr13 + View
Lotus japonicus Lj1g0013982 PF03634 - TCP family transcription factor (TCP) chr1 - View
Lotus japonicus Lj4g0017086 PF03634 - TCP family transcription factor (TCP) chr4 - View
Lonicera japonica Lj9C462T10 GWHAAZE00000009 - View
Lonicera japonica Lj5C112G14 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_107781 PTHR31072:SF33 - TRANSCRIPTION FACTOR TCP15 Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_1_13200 PF03634 - TCP family transcription factor (TCP) Lsat_1_v8_lg_1 + View
Malus domestica MD14G1198200 TEOSINTE BRANCHED Chr14 - View
Malus domestica MD13G1073500 TEOSINTE BRANCHED Chr13 + View
Malus domestica MD16G1074800 TCP family transcription factor Chr16 + View
Malus domestica MD06G1191800 TEOSINTE BRANCHED Chr06 - View
Manihot esculenta Manes.06G093900 Chromosome06 + View
Manihot esculenta Manes.01G187000 Chromosome01 + View
Manihot esculenta Manes.14G077200 Chromosome14 - View
Medicago truncatula Medtr5g039600 TCP family transcription factor chr5 - View
Medicago truncatula Medtr4g108370 TCP family transcription factor chr4 - View
Nelumbo nucifera Nn3g17205 chr3 - View
Petunia axillaris Peaxi162Scf00013g00140 TCP family transcription factor Peaxi162Scf00013 - View
Petunia axillaris Peaxi162Scf00274g00082 TCP family transcription factor Peaxi162Scf00274 + View
Punica granatum PGR044G1024 NC_045134.1 + View
Punica granatum PGR083G2797 NC_045133.1 - View
Punica granatum PGR102G2484 NC_045129.1 - View
Prunus persica Prupe.5G191200 PF03634 - TCP family transcription factor (TCP) Pp05 - View
Papaver somniferum PSO478G4552 NC_039361.1 + View
Phaseolus vulgaris Phvul.009G188100 PF03634 - TCP family transcription factor (TCP) Chr09 + View
Phaseolus vulgaris Phvul.003G190900 PF03634 - TCP family transcription factor (TCP) Chr03 + View
Quercus lobata QL03p064542 3 + View
Quercus lobata QL10p016483 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0181021 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr4g0440011 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim08G0156400 chr08 + View
Striga asiatica SGA_v2.0_scaffold114G31900 scaffold114 - View
Salvia bowleyana SalBow7G2673 GWHASIU00000005 + View
Simmondsia chinensis Sc12g0006280 GWHAASQ00000012 - View
Sechium edule Sed0002592 LG08 - View
Sechium edule Sed0003260 LG06 + View
Sechium edule Sed0009449 LG12 - View
Sechium edule Sed0023822 LG08 - View
Solanum lycopersicum Solyc06g070900.3 TCP transcription factor 17 SL4.0ch06 + View
Solanum lycopersicum Solyc05g007420.2 TCP transcription factor 23 SL4.0ch05 - View
Schrenkiella parvula Sp5g24820 PTHR31072:SF33 - TRANSCRIPTION FACTOR TCP15 ch5-6 + View
Solanum pennellii Sopen06g027180 Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner. | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (TCP14) | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TCP family transcription factor Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400000597 Transcription factor ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400003382 TCP transcription factor ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400033078 Transcription factor ST4.03ch06 + View
Trochodendron aralioides TAR629G0869 group0 + View
Trochodendron aralioides TAR371G0739 group13 - View
Theobroma cacao Thecc.03G084500 TCP domain-like protein I Chromosome_3 - View
Trifolium pratense TPR.G34731 Tp57577_TGAC_v2_scaf_629 + View
Tripterygium wilfordii TWI60G1271 NC_052246.1 + View
Tripterygium wilfordii TWI81G0836 NC_052251.1 - View
Vigna mungo VMungo1215G0148 CM024074.1 - View
Vigna mungo VMungo1309G1886 CM024072.1 - View
Vitis vinifera GSVIVG01020011001 chr1 - View
Vitis vinifera GSVIVG01008023001 chr17 - View