Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g113840 Eukaryotic translation initiation factor 5A-3 (eIF-5A-3) (eIF-4D) AmaHy_arrow1_Scaffold_2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G8450 LG-7 - View
Acer truncatum Atru.chr11.1704 chr11 + View
Actinidia chinensis Actinidia33235 Lachesis_group12 + View
Arabidopsis lyrata AL2G28520 scaffold_2 + View
Arabidopsis lyrata AL1G25790 scaffold_1 + View
Avicennia marina MSTRG.13437 ScioBoG_18778_HRSCAF_18863 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TUP8NV K02180//K03263 - cell cycle arrest protein BUB3 (BUB3) // translation initiation factor 5A (EIF5A) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4Y4AAL K03263 - translation initiation factor 5A (EIF5A) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FVHL4G K03263 - translation initiation factor 5A (EIF5A) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.78JRYT K02180//K03263 - cell cycle arrest protein BUB3 (BUB3) // translation initiation factor 5A (EIF5A) arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT1G13950 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines%2C xylem formation is reduced. eukaryotic elongation factor 5A-1 (ELF5A-1)%3B FUNCTIONS IN: ribosome binding%2C RNA binding%2C translation elongation factor activity%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%2C xylem development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C IF5A%2C hypusine site (InterPro:IPR019769)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Translation elongation factor%2C IF5A (InterPro:IPR001884)%2C Translation elongation factor%2C IF5A C-terminal (InterPro:IPR020189)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1)%3B Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264%3B Bacteria - 0%3B Metazoa - 366%3B Fungi - 246%3B Plants - 261%3B Viruses - 0%3B Other Eukaryotes - 219 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein Eukaryotic translation initiation factor 5A-2. Involved in programmed cell death triggered as a response to pseudomonas syringae infection. Loss of function mutants are more resistant to infection. FUMONISIN B1-RESISTANT12 (FBR12)%3B FUNCTIONS IN: translation initiation factor activity%3B INVOLVED IN: in 7 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C IF5A%2C hypusine site (InterPro:IPR019769)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Translation elongation factor%2C IF5A (InterPro:IPR001884)%2C Translation elongation factor%2C IF5A C-terminal (InterPro:IPR020189)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1)%3B Has 1331 Blast hits to 1330 proteins in 409 species: Archae - 256%3B Bacteria - 0%3B Metazoa - 365%3B Fungi - 242%3B Plants - 261%3B Viruses - 0%3B Other Eukaryotes - 207 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G69410 eukaryotic elongation factor 5A-3 Encodes eIF5A-2%2C a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950%2C eIF5A-2/At1g26630 and eIF5A-3/At1g69410. eukaryotic elongation factor 5A-3 (ELF5A-3)%3B FUNCTIONS IN: ribosome binding%2C RNA binding%2C translation elongation factor activity%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%2C translational frameshifting%2C positive regulation of translational termination%2C peptidyl-lysine modification to hypusine%2C positive regulation of translational elongation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C IF5A%2C hypusine site (InterPro:IPR019769)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Translation elongation factor%2C IF5A (InterPro:IPR001884)%2C Translation elongation factor%2C IF5A C-terminal (InterPro:IPR020189)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-1 (TAIR:AT1G13950.1)%3B Has 1331 Blast hits to 1330 proteins in 408 species: Archae - 255%3B Bacteria - 0%3B Metazoa - 363%3B Fungi - 252%3B Plants - 260%3B Viruses - 0%3B Other Eukaryotes - 201 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g26404 ChrC05 - View
Brassica carinata BcaB03g14079 ChrB03 + View
Brassica napus A07p35700 A07 + View
Brassica napus A09p40040 A09 + View
Brassica napus C07p19480 C07 + View
Brassica oleracea BolC5t31172H C5 - View
Brassica oleracea BolC6t39379H C6 + View
Brassica rapa BraA07t31158Z A07 + View
Brassica rapa BraA09t39500Z A09 + View
Camellia sinensis var. sinensis CSS0026902 Eukaryotic translation initiation factor 5A [Medicago truncatula] Chr2 + View
Capsicum annuum CAN.G479.52 PGAv.1.6.scaffold479 + View
Cicer arietinum L. Ca_21801_v3 Ca_LG7_v3 + View
Corylus avellana Haze_11946 Similar to Eukaryotic translation initiation factor 5A-3 (Solanum lycopersicum OX%3D4081) 9 + View
Corylus avellana Haze_07661 Similar to EIF5A5: Eukaryotic translation initiation factor 5A-5 (Solanum tuberosum OX%3D4113) 4 - View
Coffea canephora Cc11_g12450 Eukaryotic translation initiation factor 5A chr11 - View
Citrus clementina Ciclev10022624m.g scaffold_3 - View
Carpinus fangiana Cfa019280 Cfa08 - View
Carpinus fangiana Cfa008918 Cfa03 + View
Cardamine hirsuta CARHR025340 Eukaryotic translation initiation factor-5A Chr1 - View
Cardamine hirsuta CARHR014320 Eukaryotic translation initiation factor 5A-1 Chr1 + View
Cardamine hirsuta CARHR062290 Eukaryotic translation initiation factor 5A-1 Chr2 + View
Carya illinoinensis CiPaw.12G010500 K03263 - translation initiation factor 5A (EIF5A) Chr12 + View
Carya illinoinensis CiPaw.11G048200 K03263 - translation initiation factor 5A (EIF5A) Chr11 - View
Carya illinoinensis CiPaw.05G128900 K03263 - translation initiation factor 5A (EIF5A) Chr05 + View
Citrullus lanatus ClCG05G023950 Eukaryotic translation initiation factor 5A CG_Chr05 + View
Cucumis melo MELO3C012131.2 eukaryotic translation initiation factor 5A-like chr10 + View
Carica papaya Cpa.g.sc1.78 supercontig_1 - View
Capsella rubella Carub.0002s1601 K03263 - translation initiation factor 5A (EIF5A) scaffold_2 + View
Capsella rubella Carub.0001s2440 K03263 - translation initiation factor 5A (EIF5A) scaffold_1 - View
Daucus carota DCAR_030986 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_026031 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv16696 GWHABJS00000018 - View
Davidia involucrata Dinv34105 GWHABJS00000008 - View
Davidia involucrata Dinv10673 GWHABJS00000006 + View
Davidia involucrata Dinv38755 GWHABJS00000019 + View
Durio zibethinus Duzib068G1293 NW_019167838.1 - View
Durio zibethinus Duzib268G1661 NW_019168270.1 + View
Durio zibethinus Duzib205G1861 NW_019168381.1 - View
Erigeron canadensis ECA246G0249 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.B00553 Chr02 - View
Eucalyptus grandis Eucgr.K02493 Chr11 - View
Eucalyptus grandis Eucgr.G02468 Chr07 + View
Erythranthe guttata Migut.L01232 scaffold_12 + View
Erythranthe guttata Migut.E00065 scaffold_5 + View
Eutrema salsugineum Thhalv10008974m.g K03263 - translation initiation factor 5A (EIF5A) scaffold_5 + View
Eutrema salsugineum Thhalv10019263m.g K03263 - translation initiation factor 5A (EIF5A) scaffold_9 - View
Fragaria x ananassa FAN12G2550 K03263 - translation initiation factor 5A (EIF5A) Fvb4-3 - View
Fragaria x ananassa FAN22G0340 PTHR11673//PTHR11673:SF8 - TRANSLATION INITIATION FACTOR 5A-RELATED // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria vesca FvH4_4g30601 K03263 - translation initiation factor 5A (EIF5A) Fvb4 + View
Gossypium hirsutum Gohir.D12G166000 K03263 - translation initiation factor 5A (EIF5A) D12 + View
Gossypium hirsutum Gohir.D12G182600 K03263 - translation initiation factor 5A (EIF5A) D12 - View
Gossypium hirsutum Gohir.A11G032600 K03263 - translation initiation factor 5A (EIF5A) A11 - View
Gossypium hirsutum Gohir.D03G094500 K03263 - translation initiation factor 5A (EIF5A) D03 - View
Gossypium hirsutum Gohir.D07G074600 K03263 - translation initiation factor 5A (EIF5A) D07 + View
Gossypium hirsutum Gohir.A03G068000 K03263 - translation initiation factor 5A (EIF5A) A03 - View
Gossypium hirsutum Gohir.D11G035900 K03263 - translation initiation factor 5A (EIF5A) D11 - View
Gossypium hirsutum Gohir.A12G162900 K03263 - translation initiation factor 5A (EIF5A) A12 + View
Gossypium hirsutum Gohir.A12G179900 K03263 - translation initiation factor 5A (EIF5A) A12 - View
Glycine max Glyma.01G054000 K03263 - translation initiation factor 5A (EIF5A) Gm01 - View
Glycine max Glyma.04G165500 K03263 - translation initiation factor 5A (EIF5A) Gm04 + View
Glycine max Glyma.05G024200 K03263 - translation initiation factor 5A (EIF5A) Gm05 + View
Glycine max Glyma.17G103100 K03263 - translation initiation factor 5A (EIF5A) Gm17 - View
Glycine max Glyma.06G197300 K03263 - translation initiation factor 5A (EIF5A) Gm06 - View
Glycine max Glyma.02G112400 K03263 - translation initiation factor 5A (EIF5A) Gm02 - View
Gossypium raimondii Gorai.003G098700 Chr03 - View
Gossypium raimondii Gorai.001G078800 Chr01 + View
Gossypium raimondii Gorai.008G178700 Chr08 + View
Gossypium raimondii Gorai.008G195800 Chr08 - View
Gossypium raimondii Gorai.007G038700 Chr07 - View
Helianthus annuus HanXRQChr16g0502561 Putative translation elongation factor IF5A HanXRQChr16 + View
Helianthus annuus HanXRQChr08g0210561 Putative translation elongation factor IF5A HanXRQChr08 + View
Hydrangea macrophylla Hma1.2p1_0357F.1_g134350 Hma1.2p1_0357F.1 - View
Lupinus albus Lalb_Chr13g0303031 K02180//K03263 - cell cycle arrest protein BUB3 (BUB3) // translation initiation factor 5A (EIF5A) Lalb_Chr13 + View
Lupinus albus Lalb_Chr10g0098511 K03263 - translation initiation factor 5A (EIF5A) Lalb_Chr10 - View
Lupinus albus Lalb_Chr07g0178201 K03263 - translation initiation factor 5A (EIF5A) Lalb_Chr07 - View
Lotus japonicus Lj4g0027088 K03263 - translation initiation factor 5A (EIF5A) chr4 + View
Lotus japonicus Lj2g0024435 K03263 - translation initiation factor 5A (EIF5A) chr2 - View
Lotus japonicus Lj1g0001765 K03263 - translation initiation factor 5A (EIF5A) chr1 - View
Lonicera japonica Lj9C468G9 GWHAAZE00000009 - View
Lonicera japonica Lj5C107T7 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_109761 Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_5_21300 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_1_13341 K02180//K03263 - cell cycle arrest protein BUB3 (BUB3) // translation initiation factor 5A (EIF5A) Lsat_1_v8_lg_1 - View
Malus domestica MD16G1066400 eukaryotic elongation factor 5A-1 Chr16 + View
Malus domestica MD13G1067300 eukaryotic elongation factor 5A-1 Chr13 + View
Manihot esculenta Manes.14G082350 Chromosome14 - View
Manihot esculenta Manes.06G088600 Chromosome06 + View
Medicago truncatula Medtr4g109130 eukaryotic translation initiation factor 5A4 chr4 - View
Nelumbo nucifera Nn4g23305 chr4 - View
Nicotiana tabacum Nitab4.5_0002756g0020 Translation elongation factor, IF5A, hypusine site, Translation protein SH3-like domain, Translation elongation factor IF5A, Nucleic acid-binding, OB-fold, Ribosomal protein L2 domain 2, Translation elongation factor, IF5A C-terminal Nitab4.5_0002756 + View
Nicotiana tabacum Nitab4.5_0001211g0130 Nucleic acid-binding, OB-fold, Translation elongation factor, IF5A, hypusine site, Translation elongation factor IF5A, Translation protein SH3-like domain, Ribosomal protein L2 domain 2, Translation elongation factor, IF5A C-terminal Nitab4.5_0001211 + View
Nicotiana tabacum Nitab4.5_0000141g0010 Nucleic acid-binding, OB-fold, Translation elongation factor, IF5A, hypusine site, Ribosomal protein L2 domain 2, Translation elongation factor IF5A, Translation elongation factor, IF5A C-terminal, Translation protein SH3-like domain Nitab4.5_0000141 + View
Oryza sativa ssp. japonica Os03g0758800 Similar to Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D). chr03 + View
Oryza sativa ssp. japonica Os07g0597000 Similar to Eukaryotic translation initiation factor 5A (eIF-5A). chr07 - View
Petunia axillaris Peaxi162Scf00274g00004 Eukaryotic translation initiation factor 5A-1 Peaxi162Scf00274 + View
Punica granatum PGR044G0619 NC_045134.1 + View
Punica granatum PGR102G2771 NC_045129.1 - View
Punica granatum PGR119G1841 NC_045132.1 + View
Prunus persica Prupe.1G280900 K03263 - translation initiation factor 5A (EIF5A) Pp01 - View
Papaver somniferum PSO478G4513 NC_039361.1 + View
Populus trichocarpa Potri.008G092000 K03263 - translation initiation factor 5A (EIF5A) Chr08 - View
Populus trichocarpa Potri.010G162800 K03263 - translation initiation factor 5A (EIF5A) Chr10 + View
Phaseolus vulgaris Phvul.009G184600 K03263 - translation initiation factor 5A (EIF5A) Chr09 + View
Phaseolus vulgaris Phvul.003G187500 Chr03 + View
Quercus lobata QL03p069981 3 - View
Quercus lobata QL10p017993 10 - View
Rosa chinensis RcHm_v2.0_Chr4g0439011 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0133400 chr12 - View
Striga asiatica SGA_v2.0_scaffold313G48318 scaffold313 + View
Salix brachista Sabra10G0123800 GWHAAZH00000010 + View
Salix brachista Sabra08G0068900 GWHAAZH00000008 - View
Simmondsia chinensis Sc10g0009800 GWHAASQ00000010 + View
Simmondsia chinensis Sc04g0002930 GWHAASQ00000004 - View
Simmondsia chinensis Sc04g0007800 GWHAASQ00000004 + View
Sechium edule Sed0018846 LG06 + View
Solanum lycopersicum Solyc03g115650.4 eukaryotic translation initiation factor 5A-1 SL4.0ch03 + View
Solanum lycopersicum Solyc04g005510.3 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A1U8HES8_CAPAN) SL4.0ch04 + View
Schrenkiella parvula Sp5g24460 K03263 - translation initiation factor 5A (EIF5A) ch5-6 + View
Schrenkiella parvula Sp1g22170 K03263 - translation initiation factor 5A (EIF5A) ch1-1 - View
Solanum pennellii Sopen04g001530 Eukaryotic translation initiation factor 5A-4 (eIF-5A-4) (eIF-4D) - Solanum tuberosum (Potato), Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. | eukaryotic elongation factor 5A-1 (ELF5A-1) | FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity | INVOLVED IN: translational initiation, xylem development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Translation elongation factor, IF5A, hypusine site , Translation protein SH3-like, subgroup , Translation elongation factor, IF5A , Translation elongation factor, IF5A C-terminal , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , KOW | BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 Spenn-ch04 + View
Solanum pennellii Sopen03g034640 Eukaryotic translation initiation factor 5A-5 (eIF-5A-5) (eIF-4D) - Solanum tuberosum (Potato), Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. | eukaryotic elongation factor 5A-1 (ELF5A-1) | FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity | INVOLVED IN: translational initiation, xylem development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Translation elongation factor, IF5A, hypusine site , Translation protein SH3-like, subgroup , Translation elongation factor, IF5A , Translation elongation factor, IF5A C-terminal , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , KOW | BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400024558 Eukaryotic translation initiation factor 5A-5 ST4.03ch03 + View
Selenicereus undatus Hund02618 Scaffold_33678 + View
Selenicereus undatus Hund25201 Scaffold_3410 + View
Selenicereus undatus Hund09837 Scaffold_10417 - View
Trochodendron aralioides TAR622G0349 group8 + View
Trochodendron aralioides TAR371G1062 group13 - View
Theobroma cacao Thecc.03G095100 Eukaryotic elongation factor 5A-1 Chromosome_3 - View
Theobroma cacao Thecc.02G338400 Eukaryotic elongation factor 5A-1 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104822903 eukaryotic translation initiation factor 5A-2-like NW_010966822.1 + View
Trifolium pratense TPR.G2035 Tp57577_TGAC_v2_LG5 + View
Trifolium pratense TPR.G12278 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI81G0512 NC_052251.1 + View
Vigna mungo VMungo1215G1119 CM024074.1 - View
Vigna mungo VMungo1309G0208 CM024072.1 + View
Vitis vinifera GSVIVG01007954001 chr17 - View
Zea mays Zm00001eb326630 Zm00001e035464 Eukaryotic translation initiation factor 5A 7 - View