Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G12880 LG-5 + View
Aethionema arabicum Aa31LG3G18400 LG-3 - View
Aethionema arabicum Aa31LG2G3690 LG-2 - View
Acer truncatum Atru.chr9.637 chr9 + View
Arabidopsis lyrata AL6G18520 scaffold_6 + View
Arabidopsis lyrata AL3G11640 scaffold_3 + View
Avicennia marina MSTRG.15429 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.23850 ScioBoG_3895_HRSCAF_3912 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V9ZUVQ PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q3JRQN PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT5G08139 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G60820.1)%3B Has 9271 Blast hits to 9218 proteins in 288 species: Archae - 4%3B Bacteria - 19%3B Metazoa - 2506%3B Fungi - 730%3B Plants - 4517%3B Viruses - 59%3B Other Eukaryotes - 1436 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G60820 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G08139.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G02340 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15820.1)%3B Has 9104 Blast hits to 9081 proteins in 277 species: Archae - 2%3B Bacteria - 2%3B Metazoa - 2595%3B Fungi - 690%3B Plants - 4590%3B Viruses - 42%3B Other Eukaryotes - 1183 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB08g37282 ChrB08 - View
Brassica carinata BcaC06g33196 ChrC06 + View
Brassica napus A10p28530 A10 - View
Brassica napus C03p04100 C03 + View
Brassica napus C09p68810 C09 - View
Brassica oleracea BolC9t59628H C9 - View
Brassica oleracea BolC7t44979H C7 + View
Brassica rapa BraA10t44902Z A10 - View
Beta vulgaris EL10Ac5g11199 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0041798 PREDICTED: E3 ubiquitin-protein ligase Praja-2-like [Solanum tuberosum] Chr2 + View
Cicer arietinum L. Ca_21748_v3 Ca_LG7_v3 - View
Corylus avellana Haze_18547 Similar to CIP8: E3 ubiquitin-protein ligase CIP8 (Arabidopsis thaliana OX%3D3702) 7 - View
Corylus avellana Haze_14353 Similar to CIP8: E3 ubiquitin-protein ligase CIP8 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc07_g04700 Putative uncharacterized protein chr7 + View
Coffea canephora Cc04_g08020 Putative RING/U-box superfamily protein chr4 - View
Ceratophyllum demersum CDE01G0367 11 + View
Carpinus fangiana Cfa019853 Cfa08 - View
Cardamine hirsuta CARHR076320 RING/U-box superfamily protein Chr3 + View
Cardamine hirsuta CARHR274500 RING/U-box superfamily protein Chr8 + View
Cardamine hirsuta CARHR205050 RING/U-box superfamily protein Chr6 - View
Carya illinoinensis CiPaw.04G050800 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr04 - View
Carica papaya Cpa.g.sc3.214 supercontig_3 - View
Chenopodium quinoa AUR62032151 RING1: E3 ubiquitin-protein ligase RING1 C_Quinoa_Scaffold_1177 + View
Chenopodium quinoa AUR62039685 RING1: E3 ubiquitin-protein ligase RING1 C_Quinoa_Scaffold_1452 + View
Capsella rubella Carub.0003s0145 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_3 + View
Capsella rubella Carub.0008s2152 PTHR22763//PTHR22763:SF88 - RING ZINC FINGER PROTEIN // RING/U-BOX DOMAIN-CONTAINING PROTEIN scaffold_8 + View
Capsella rubella Carub.0006s0703 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_6 + View
Daucus carota DCAR_010188 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv38626 GWHABJS00000019 + View
Davidia involucrata Dinv36823 GWHABJS00000006 - View
Durio zibethinus Duzib068G1366 NW_019167838.1 + View
Durio zibethinus Duzib205G0968 NW_019168381.1 - View
Durio zibethinus Duzib084G0164 NW_019167827.1 + View
Erigeron canadensis ECA246G2794 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA247G2242 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.B00656 Chr02 + View
Erythranthe guttata Migut.H00571 scaffold_8 - View
Eutrema salsugineum Thhalv10020821m.g PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_13 - View
Eutrema salsugineum Thhalv10013909m.g PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_2 + View
Fragaria x ananassa FAN08G3694 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb5-3 + View
Fragaria x ananassa FAN13G1552 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb5-2 - View
Fragaria x ananassa FAN18G2262 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb5-1 - View
Fragaria vesca FvH4_5g13270 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb5 - View
Gossypium hirsutum Gohir.D03G099200 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D03 + View
Gossypium hirsutum Gohir.A03G072600 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED A03 + View
Glycine max Glyma.17G082500 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Gm17 + View
Glycine max Glyma.05G017500 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Gm05 - View
Gossypium raimondii Gorai.003G104200 Chr03 + View
Lupinus albus Lalb_Chr07g0178451 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr07 + View
Lupinus albus Lalb_Chr02g0158631 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr02 - View
Lupinus albus Lalb_Chr13g0302641 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr13 - View
Lotus japonicus Lj4g0010494 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED chr4 - View
Lonicera japonica Lj9P436T63 GWHAAZE00000009 - View
Lonicera japonica Lj5P138T33 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_1_15520 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_3_95340 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_5_24400 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_4_112480 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 + View
Malus domestica MD17G1068100 RING/U-box superfamily protein Chr17 + View
Malus domestica MD06G1206700 RING/U-box superfamily protein Chr06 + View
Manihot esculenta Manes.14G090100 Chromosome14 + View
Manihot esculenta Manes.06G079900 Chromosome06 - View
Medicago truncatula Medtr4g110100 zinc finger, C3HC4 type (RING finger) protein chr4 + View
Petunia axillaris Peaxi162Scf00017g00321 RING/U-box superfamily protein Peaxi162Scf00017 - View
Punica granatum PGR044G2376 NC_045134.1 - View
Punica granatum PGR004G1097 NC_045131.1 - View
Prunus persica Prupe.3G246300 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp03 - View
Prunus persica Prupe.5G211100 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp05 + View
Papaver somniferum PSO478G0192 NC_039361.1 - View
Populus trichocarpa Potri.017G102800 PF13639 - Ring finger domain (zf-RING_2) Chr17 + View
Populus trichocarpa Potri.012G065300 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr12 + View
Phaseolus vulgaris Phvul.003G181600 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Chr03 - View
Quercus lobata QL10p021377 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0183901 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim12G0147100 chr12 - View
Rhododendron simsii Rhsim08G0078800 chr08 + View
Striga asiatica SGA_v2.0_scaffold4G02349 scaffold4 - View
Salix brachista Sabra12G0046700 GWHAAZH00000012 + View
Simmondsia chinensis Sc04g0004000 GWHAASQ00000004 + View
Sapria himalayana SHI19004 scaffold32_6892495 - View
Solanum lycopersicum Solyc03g114680.3 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) SL4.0ch03 - View
Solanum lycopersicum Solyc02g089410.3 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) SL4.0ch02 + View
Schrenkiella parvula Sp6g34810 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch6-6 - View
Schrenkiella parvula Sp3g01400 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch3-1 + View
Solanum pennellii Sopen02g015860 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 - View
Solanum pennellii Sopen03g033750 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400001386 Zinc finger protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400026558 Zinc finger protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400024614 Zinc finger protein ST4.03ch03 - View
Trochodendron aralioides TAR622G1312 group8 - View
Trochodendron aralioides TAR629G0615 group0 - View
Theobroma cacao Thecc.03G110600 Zinc finger protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104800993 E3 ubiquitin-protein ligase Praja-2 NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104818361 uncharacterized protein LOC104818361 NW_010966092.1 + View
Trifolium pratense TPR.G1991 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI34G1377 NC_052235.1 - View
Tripterygium wilfordii TWI81G0924 NC_052251.1 + View
Tripterygium wilfordii TWI15G0573 NC_052247.1 - View
Vaccinium macrocarpon vmacro16470 Similar to RING1: E3 ubiquitin-protein ligase RING1 (Gossypium hirsutum OX%3D3635) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0832 CM024074.1 + View