Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g112830 AmaHy_arrow1_Scaffold_2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G730 LG-11 - View
Acer truncatum Atru.chr9.2386 chr9 + View
Actinidia chinensis Actinidia19071 Lachesis_group9 - View
Actinidia chinensis Actinidia34966 Lachesis_group2 - View
Actinidia chinensis Actinidia04952 Lachesis_group1 - View
Actinidia chinensis Actinidia37690 Lachesis_group13 + View
Arabidopsis lyrata AL2G34750 scaffold_2 + View
Avicennia marina MSTRG.23075 ScioBoG_3703_HRSCAF_3719 - View
Aquilegia oxysepala Aqoxy3G03149 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JGQP5W PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT1G74870 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: sperm cell%2C sepal%2C flower%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G48070.1)%3B Has 508 Blast hits to 508 proteins in 180 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 172%3B Fungi - 119%3B Plants - 127%3B Viruses - 0%3B Other Eukaryotes - 88 (source: NCBI BLink). Chr1 + View
Brassica oleracea BolC8t49934H C8 + View
Beta vulgaris EL10Ac5g10856 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0007260 unnamed protein product [Coffea canephora] Chr2 - View
Capsicum annuum CAN.G853.31 PGAv.1.6.scaffold853 - View
Cannabis sativa CANSAT80G1172 NC_044372.1 - View
Cicer arietinum L. Ca_21876_v3 Ca_LG7_v3 + View
Corylus avellana Haze_07423 Protein of unknown function 4 + View
Citrus clementina Ciclev10020913m.g scaffold_3 + View
Carpinus fangiana Cfa019053 Cfa08 + View
Cardamine hirsuta CARHR068190 CCR4-NOT transcription complex subunit Chr2 + View
Carya illinoinensis CiPaw.11G033600 PTHR12603:SF5 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr11 - View
Carya illinoinensis CiPaw.12G022400 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr12 + View
Citrullus lanatus ClCG06G016630 CCR4-NOT transcription complex subunit CG_Chr06 + View
Cucumis melo MELO3C017131.2 General negative regulator of transcription subunit 4 chr02 + View
Chenopodium quinoa AUR62008299 MOT2: General negative regulator of transcription subunit 4 C_Quinoa_Scaffold_3422 - View
Chenopodium quinoa AUR62031061 MOT2: General negative regulator of transcription subunit 4 C_Quinoa_Scaffold_2689 - View
Capsella rubella Carub.0002s2165 PTHR12603 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED scaffold_2 + View
Daucus carota DCAR_026098 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_016521 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv13125 GWHABJS00000006 + View
Davidia involucrata Dinv02655 GWHABJS00000019 - View
Durio zibethinus Duzib205G1906 NW_019168381.1 - View
Erigeron canadensis ECA246G1618 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.K02893 Chr11 - View
Erythranthe guttata Migut.I00089 scaffold_9 + View
Eutrema salsugineum Thhalv10018832m.g PTHR12603:SF5 - RING/U-BOX DOMAIN-CONTAINING PROTEIN scaffold_9 - View
Fragaria x ananassa FAN04G3183 PTHR12603:SF5 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb5-4 + View
Fragaria x ananassa FAN18G2664 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb5-1 + View
Fragaria x ananassa FAN08G3627 PTHR12603:SF5 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb5-3 - View
Fragaria x ananassa FAN13G0872 PTHR12603:SF5 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb5-2 + View
Fragaria vesca FvH4_5g16220 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb5 + View
Glycine max Glyma.17G094000 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Gm17 - View
Glycine max Glyma.05G032700 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Gm05 + View
Helianthus annuus HanXRQChr16g0503521 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr16 + View
Hydrangea macrophylla Hma1.2p1_0002F.1_g002940 Hma1.2p1_0002F.1 - View
Lupinus albus Lalb_Chr12g0201311 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Lalb_Chr12 + View
Lupinus albus Lalb_Chr07g0182481 PTHR12603:SF5 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Lalb_Chr07 + View
Lotus japonicus Lj4g0009456 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN chr4 + View
Lonicera japonica Lj5P120T23 GWHAAZE00000005 + View
Lonicera japonica Lj9A455T56 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_4_74020 PTHR12603:SF5 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Lsat_1_v8_lg_4 + View
Malus domestica MD06G1182900 RING/U-box superfamily protein Chr06 - View
Malus domestica MD14G1188800 RING/U-box superfamily protein Chr14 - View
Manihot esculenta Manes.06G099500 Chromosome06 + View
Manihot esculenta Manes.14G071600 Chromosome14 - View
Medicago truncatula Medtr4g107090 hypothetical protein chr4 - View
Nelumbo nucifera Nn3g17049 chr3 - View
Nelumbo nucifera Nn4g22949 chr4 - View
Olea europaea Oeu016328.1 chr18 - View
Petunia axillaris Peaxi162Scf00689g00417 RING/U-box superfamily protein Peaxi162Scf00689 - View
Petunia axillaris Peaxi162Scf00017g02226 RING/U-box superfamily protein Peaxi162Scf00017 + View
Prunus persica Prupe.5G181100 Pp05 - View
Papaver somniferum PSO832G1005 NC_039367.1 + View
Populus trichocarpa Potri.012G074500 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr12 + View
Populus trichocarpa Potri.015G069400 PTHR12603//PTHR12603:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX RELATED // RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr15 + View
Phaseolus vulgaris Phvul.003G196200 Chr03 + View
Quercus lobata QL10p013839 10 - View
Rosa chinensis RcHm_v2.0_Chr7g0179881 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim12G0160900 chr12 + View
Rhododendron simsii Rhsim08G0166900 chr08 + View
Striga asiatica SGA_v2.0_scaffold114G31857 scaffold114 - View
Salvia bowleyana SalBow5G5680 GWHASIU00000003 + View
Salix brachista Sabra15G0093700 GWHAAZH00000015 + View
Salix brachista Sabra12G0053000 GWHAAZH00000012 + View
Simmondsia chinensis Sc04g0002200 GWHAASQ00000004 - View
Simmondsia chinensis Sc12g0005590 GWHAASQ00000012 + View
Sechium edule Sed0003261 LG08 - View
Sechium edule Sed0002761 LG12 - View
Solanum lycopersicum Solyc03g113700.3 General negative regulator of transcription subunit 4 (AHRD V3.3 *** A0A1J3F722_NOCCA) SL4.0ch03 + View
Solanum pennellii Sopen03g032750 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400024467 Putative anti-virus transcriptional factor ST4.03ch03 + View
Selenicereus undatus Hund09399 Scaffold_10417 + View
Selenicereus undatus Hund02704 Scaffold_33678 + View
Theobroma cacao Thecc.03G002000 RING/U-box superfamily protein Chromosome_3 + View
Tripterygium wilfordii TWI60G0871 NC_052246.1 - View
Vaccinium macrocarpon vmacro19348 Similar to CNOT4: CCR4-NOT transcription complex subunit 4 (Homo sapiens OX%3D9606) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro16581 Similar to SPAC16C9.04c: Putative general negative regulator of transcription C16C9.04c (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G1056 CM024074.1 - View
Vitis vinifera GSVIVG01007838001 chr17 + View