Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g112670 AmaHy_arrow1_Scaffold_2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G28410 LG-1 + View
Acer truncatum Atru.chr5.894 chr5 + View
Actinidia chinensis Actinidia21351 Lachesis_group19 - View
Actinidia chinensis Actinidia06397 Lachesis_group24 - View
Avicennia marina MSTRG.18064 ScioBoG_22153_HRSCAF_22259 + View
Aquilegia oxysepala Aqoxy5G02784 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5CG51V PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT2G47070 squamosa promoter binding protein-like 1 member of SPL gene family%2C encodes DNA binding proteins and putative transcription factors. All have the SBP-box%2C which encodes the SBP-domain%2C required for and sufficient for interaction with DNA. squamosa promoter binding protein-like 1 (SPL1)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C SBP-box (InterPro:IPR004333)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1)%3B Has 940 Blast hits to 885 proteins in 46 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 930%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB02g08804 ChrB02 - View
Brassica napus A05p00730 A05 - View
Brassica napus C04p00890 C04 - View
Brassica oleracea BolC4t21727H C4 - View
Camellia sinensis var. sinensis CSS0037326 PREDICTED: squamosa promoter-binding-like protein 12 [Prunus mume] Chr5 - View
Cicer arietinum L. Ca_10248_v3 Ca_LG4_v3 + View
Corylus avellana Haze_05125 Similar to SPL1: Squamosa promoter-binding-like protein 1 (Arabidopsis thaliana OX%3D3702) 2 - View
Citrus clementina Ciclev10018697m.g scaffold_3 - View
Carpinus fangiana Cfa004887 Cfa02 - View
Cardamine hirsuta CARHR142430 squamosa promoter binding protein-like 1 Chr4 + View
Carya illinoinensis CiPaw.08G084300 PTHR31251:SF8 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Chr08 + View
Carya illinoinensis CiPaw.07G123900 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Chr07 - View
Citrullus lanatus ClCG10G011820 SQUAMOSA promoter binding protein CG_Chr10 - View
Carica papaya Cpa.g.sc146.32 supercontig_146 + View
Chenopodium quinoa AUR62024559 SPL12: Squamosa promoter-binding-like protein 12 C_Quinoa_Scaffold_1992 + View
Chenopodium quinoa AUR62011728 SPL1: Squamosa promoter-binding-like protein 1 C_Quinoa_Scaffold_2008 + View
Capsella rubella Carub.0004s2981 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED scaffold_4 + View
Cucumis sativus L. CsaV3_3G031570 squamosa promoter-binding-like protein 1 chr3 + View
Davidia involucrata Dinv12094 GWHABJS00000007 + View
Davidia involucrata Dinv33162 GWHABJS00000010 - View
Davidia involucrata Dinv24868 GWHABJS00000018 - View
Durio zibethinus Duzib138G1731 NW_019167893.1 + View
Durio zibethinus Duzib133G0518 NW_019167938.1 + View
Erythranthe guttata Migut.D00024 scaffold_4 + View
Eutrema salsugineum Thhalv10001295m.g PTHR31251:SF8 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED scaffold_22 + View
Gossypium hirsutum Gohir.D12G124700 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED D12 + View
Gossypium hirsutum Gohir.A12G120900 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED A12 + View
Glycine max Glyma.16G054500 PTHR31251//PTHR31251:SF20 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED Gm16 + View
Glycine max Glyma.02G008600 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Gm02 + View
Gossypium raimondii Gorai.008G135700 Chr08 + View
Lupinus albus Lalb_Chr02g0147041 PF03110//PF12796 - SBP domain (SBP) // Ankyrin repeats (3 copies) (Ank_2) Lalb_Chr02 - View
Lotus japonicus Lj1g0013691 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED chr1 - View
Lonicera japonica Lj1C10G2 GWHAAZE00000001 + View
Lonicera japonica Lj6P827T37 GWHAAZE00000006 - View
Magnolia biondii MBI19_g32726_MAGBIO AED:0.61 Chr19 + View
Manihot esculenta Manes.01G233400 Chromosome01 - View
Manihot esculenta Manes.05G010400 Chromosome05 - View
Medicago truncatula Medtr7g110320 squamosa promoter-binding-like protein chr7 - View
Medicago truncatula Medtr1g086250 squamosa promoter-binding-like protein chr1 + View
Nelumbo nucifera Nn3g21895 chr3 - View
Nicotiana tabacum Nitab4.5_0003324g0070 Ankyrin repeat-containing domain, Transcription factor, SBP-box Nitab4.5_0003324 + View
Nicotiana tabacum Nitab4.5_0000222g0290 Transcription factor, SBP-box, Ankyrin repeat-containing domain Nitab4.5_0000222 - View
Nicotiana tabacum Nitab4.5_0000363g0110 Transcription factor, SBP-box, Ankyrin repeat-containing domain Nitab4.5_0000363 - View
Olea europaea Oeu038065.1 chr12 + View
Olea europaea Oeu011421.1 chr8 + View
Oryza sativa ssp. japonica Os01g0292900 Similar to Squamosa-promoter binding-like protein 2. chr01 + View
Punica granatum PGR042G3374 NC_045130.1 - View
Pisum sativum Psat3g018160 SBP domain chr3LG5 + View
Papaver somniferum PSO210G3653 NC_039359.1 + View
Papaver somniferum PSO761G0665 NW_020622381.1 + View
Populus trichocarpa Potri.014G114300 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Chr14 + View
Populus trichocarpa Potri.002G188700 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Chr02 + View
Phaseolus vulgaris Phvul.007G210600 PTHR31251:SF8 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Chr07 + View
Quercus lobata QL12p034448 12 - View
Rhododendron simsii Rhsim13G0000500 chr13 + View
Striga asiatica SGA_v2.0_scaffold80G25685 scaffold80 + View
Salix brachista Sabra08G0074100 GWHAAZH00000008 - View
Salix brachista Sabra02G0166600 GWHAAZH00000002 - View
Simmondsia chinensis Sc17g0000130 GWHAASQ00000017 + View
Schrenkiella parvula Sp4g29060 PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED ch4-6 + View
Solanum tuberosum PGSC0003DMG400005196 Ankyrin ST4.03ch01 - View
Selenicereus undatus Hund11631 Scaffold_33679 + View
Trochodendron aralioides TAR362G1270 group17 - View
Trochodendron aralioides TAR365G1217 group16 + View
Trochodendron aralioides TAR633G1629 group2 - View
Theobroma cacao Thecc.01G323200 Squamosa promoter-binding protein Chromosome_1 - View
Trifolium pratense TPR.G4116 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G3043 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI14G0396 NC_052249.1 + View
Tripterygium wilfordii TWI59G0684 NC_052248.1 + View
Vaccinium macrocarpon vmacro02366 Similar to SPL1: Squamosa promoter-binding-like protein 1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G1941 CM024070.1 + View
Vigna mungo VMungo0720G0292 CM024071.1 - View
Vitis vinifera GSVIVG01017678001 chr5 - View
Vitis vinifera GSVIVG01028208001 chr7 - View