Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Actinidia29609 Lachesis_group7 + View
Actinidia33109 Lachesis_group27 + View
Actinidia30810 Lachesis_group28 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.1228 chr6 - View
Acer truncatum Atru.chr13.1047 chr13 + View
Avicennia marina MSTRG.16609 ScioBoG_19743_HRSCAF_19834 - View
Amaranthus hybridus Ah.01g024020 Peptidyl-prolyl cis-trans isomerase FKBP12 (PPIase FKBP12) (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FK506-binding protein 12) (AtFKBP12) (FKBP-12) (Immunophilin FKBP12) (Rotamase) AmaHy_arrow1_Scaffold_1 + View
Amaranthus hybridus Ah.05g170640 Transcription factor bHLH145 (Basic helix-loop-helix protein 145) (AtbHLH145) (bHLH 145) (Transcription factor EN 131) (bHLH transcription factor bHLH145) AmaHy_arrow1_Scaffold_5 - View
Aquilegia oxysepala Aqoxy6G01463 CHR06 + View
Aquilegia oxysepala Aqoxy5G01330 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FV0XI2 arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NI9N2T PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KFP2BM PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZL8253 PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0E4ZKW PTHR35281//PTHR35281:SF1//PTHR36066//PTHR36066:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5W7NNK arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IVYM6W PTHR35281//PTHR35281:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT5G09460 transcription factor bHLH143 sequence-specific DNA binding transcription factors%3Btranscription regulators%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%3B BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors%3Btranscription regulators (TAIR:AT5G64340.1)%3B Has 178 Blast hits to 178 proteins in 26 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 6%3B Fungi - 1%3B Plants - 159%3B Viruses - 0%3B Other Eukaryotes - 10 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0022G065 AmTr_v1.0_scaffold00135 - View
Beta vulgaris EL10Ac9g22086 PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Chr9_EL10_PGA_scaffold8 + View
Beta vulgaris EL10Ac1g01104 Chr1_EL10_PGA_scaffold3 - View
Camellia sinensis var. sinensis CSS0016051 PREDICTED: uncharacterized protein LOC104603913 [Nelumbo nucifera] Chr4 + View
Capsicum annuum CAN.G523.28 PGAv.1.6.scaffold523 + View
Cannabis sativa CANSAT11G0868 NC_044377.1 - View
Cicer arietinum L. Ca_05398_v3 Ca_LG2_v3 - View
Corylus avellana Haze_10554 Similar to BHLH143: Transcription factor bHLH143 (Arabidopsis thaliana OX%3D3702) 9 + View
Corylus avellana Haze_22345 Similar to BHLH145: Transcription factor bHLH145 (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc10_g15590 Putative uncharacterized protein chr10 - View
Citrus clementina Ciclev10003720m.g scaffold_5 + View
Ceratophyllum demersum CDE10G0928 8 - View
Carpinus fangiana Cfa013701 Cfa05 + View
Cardamine hirsuta CARHR203920 Conserved peptide upstream open reading frame 43 Chr6 + View
Carya illinoinensis CiPaw.05G031100 PTHR35281//PTHR35281:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Chr05 + View
Carya illinoinensis CiPaw.08G054100 Chr08 - View
Carya illinoinensis CiPaw.07G168100 PTHR35281//PTHR35281:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Chr07 + View
Citrullus lanatus ClCG08G011500 Conserved peptide upstream open reading frame 37 CG_Chr08 - View
Cucumis melo MELO3C011067.2 transcription factor bHLH143-like isoform X1 chr03 + View
Corchorus olitorius COL.COLO4_32356 putative transcription factor AWUE01021101.1 - View
Chenopodium quinoa AUR62027851 BHLH145: Transcription factor bHLH145 C_Quinoa_Scaffold_3784 - View
Chenopodium quinoa AUR62019010 BHLH145: Transcription factor bHLH145 C_Quinoa_Scaffold_3876 - View
Chenopodium quinoa AUR62012897 BHLH143: Transcription factor bHLH143 C_Quinoa_Scaffold_1040 + View
Chenopodium quinoa AUR62027121 BHLH143: Transcription factor bHLH143 C_Quinoa_Scaffold_2314 + View
Cucumis sativus L. CsaV3_2G030090 transcription factor bHLH143-like isoform X1 chr2 - View
Daucus carota DCAR_012866 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv24160 GWHABJS00000005 + View
Davidia involucrata Dinv44836 GWHABJS00000002 - View
Davidia involucrata Dinv42637 GWHABJS00000179 + View
Durio zibethinus Duzib116G0593 NW_019167949.1 + View
Durio zibethinus Duzib041G0605 NW_019167826.1 + View
Durio zibethinus Duzib093G0625 NW_019167937.1 - View
Erigeron canadensis ECA247G1217 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA246G0388 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.F00406 Chr06 + View
Eucalyptus grandis Eucgr.F02127 Chr06 + View
Erythranthe guttata Migut.B00565 scaffold_2 + View
Eutrema salsugineum Thhalv10015779m.g PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED scaffold_2 - View
Fragaria x ananassa FAN04G1269 Fvb5-4 + View
Fragaria x ananassa FAN08G0378 PTHR35281//PTHR35281:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Fvb5-3 - View
Fragaria x ananassa FAN18G3889 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Fvb5-1 + View
Fragaria x ananassa FAN13G1260 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Fvb5-2 + View
Fragaria vesca FvH4_5g35810 Fvb5 + View
Gossypium hirsutum Gohir.A05G265200 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED A05 + View
Gossypium hirsutum Gohir.D05G224000 D05 + View
Gossypium hirsutum Gohir.D06G032600 D06 + View
Gossypium hirsutum Gohir.D05G267450 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED D05 + View
Gossypium hirsutum Gohir.A06G032636 A06 + View
Gossypium hirsutum Gohir.A05G221300 A05 + View
Glycine max Glyma.06G094800 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Gm06 + View
Glycine max Glyma.14G179900 Gm14 - View
Glycine max Glyma.02G212200 Gm02 - View
Glycine max Glyma.15G056600 PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Gm15 - View
Glycine max Glyma.08G069600 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Gm08 + View
Glycine max Glyma.04G093000 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Gm04 + View
Gossypium raimondii Gorai.009G231400 Chr09 + View
Gossypium raimondii Gorai.009G279600 Chr09 + View
Gossypium raimondii Gorai.010G035900 Chr10 + View
Helianthus annuus HanXRQChr05g0163291 Uncharacterized protein, conserved in plant genome(s) HanXRQChr05 - View
Helianthus annuus HanXRQChr10g0278051 Probable sequence-specific DNA binding transcription factors;transcription regulators HanXRQChr10 - View
Hydrangea macrophylla Hma1.2p1_0125F.1_g059100 Hma1.2p1_0125F.1 + View
Hydrangea macrophylla Hma1.2p1_0010F.1_g007000 Hma1.2p1_0010F.1 + View
Lupinus albus Lalb_Chr17g0344411 Lalb_Chr17 - View
Lupinus albus Lalb_Chr08g0242361 Lalb_Chr08 - View
Lupinus albus Lalb_Chr11g0065111 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Lalb_Chr11 + View
Lupinus albus Lalb_Chr04g0252981 PTHR35281//PTHR35281:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Lalb_Chr04 + View
Lotus japonicus Lj4g0016585 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED chr4 + View
Lotus japonicus LjContig00408g0004832 PTHR35281//PTHR35281:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Contig00408 + View
Lotus japonicus Lj1g0003364 chr1 - View
Lotus japonicus Lj6g0012273 PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED chr6 + View
Lonicera japonica Lj4P733T2 GWHAAZE00000004 - View
Lonicera japonica Lj4C91T0 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_1_2200 PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_6_105780 Lsat_1_v8_lg_6 - View
Magnolia biondii MBI02_g18287_MAGBIO AED:0.08 Chr02 - View
Magnolia biondii MBI06_g42716_MAGBIO AED:0.12 Chr06 - View
Malus domestica MD15G1381700 sequence-specific DNA binding transcription factors Chr15 - View
Malus domestica MD08G1192900 sequence-specific DNA binding transcription factors Chr08 - View
Manihot esculenta Manes.10G102000 Chromosome10 + View
Manihot esculenta Manes.18G061200 Chromosome18 + View
Manihot esculenta Manes.07G037000 Chromosome07 - View
Manihot esculenta Manes.02G146800 Chromosome02 + View
Medicago truncatula Medtr5g065670 transcription factor chr5 - View
Nelumbo nucifera Nn1g05505 chr1 - View
Nelumbo nucifera Nn5g29940 chr5 + View
Nicotiana tabacum Nitab4.5_0001507g0060 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0001507 + View
Petunia axillaris Peaxi162Scf00281g00710 Transcription factor, putative isoform 1 Peaxi162Scf00281 + View
Petunia axillaris Peaxi162Scf00160g01119 Unknown protein Peaxi162Scf00160 + View
Punica granatum PGR042G1641 NC_045130.1 - View
Punica granatum PGR042G0850 NC_045130.1 - View
Prunus persica Prupe.1G527600 Pp01 - View
Papaver somniferum PSO541G2838 NC_039363.1 - View
Papaver somniferum PSO675G6469 NC_039358.1 + View
Populus trichocarpa Potri.017G047932 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Chr17 + View
Populus trichocarpa Potri.005G158000 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Chr05 + View
Populus trichocarpa Potri.002G103300 Chr02 - View
Phaseolus vulgaris Phvul.008G179500 Chr08 - View
Phaseolus vulgaris Phvul.009G038200 Chr09 - View
Phaseolus vulgaris Phvul.006G203500 PTHR35281:SF1 - CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 37-RELATED Chr06 + View
Quercus lobata QL09p017152 9 - View
Rosa chinensis RcHm_v2.0_Chr7g0237501 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim06G0074100 chr06 + View
Rhododendron simsii Rhsim05G0102500 chr05 + View
Rhododendron simsii Rhsim07G0210000 chr07 - View
Salix brachista Sabra17G0032400 GWHAAZH00000017 + View
Salix brachista Sabra02G0081000 GWHAAZH00000002 - View
Salix brachista Sabra05G0120800 GWHAAZH00000005 + View
Simmondsia chinensis Sc23g0000580 GWHAASQ00000023 - View
Simmondsia chinensis Sc01g0001030 GWHAASQ00000001 - View
Sechium edule Sed0020961 LG04 - View
Sechium edule Sed0009224 LG06 - View
Sechium edule Sed0006645 LG03 - View
Solanum lycopersicum Solyc01g105690.2 transcription factor bHLH143-like (AHRD V3.3 *** A0A2I4HEY9_9ROSI) SL4.0ch01 - View
Solanum lycopersicum Solyc04g076030.3 transcription factor bHLH143-like (AHRD V3.3 *** A0A2I4FQB9_9ROSI) SL4.0ch04 - View
Solanum lycopersicum Solyc12g087890.3 transcription factor bHLH143-like (AHRD V3.3 *** A0A2I4FQB9_9ROSI) SL4.0ch12 - View
Schrenkiella parvula Sp6g33870 PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED ch6-6 + View
Solanum pennellii Sopen04g029980 sequence-specific DNA binding transcription factors, transcription regulators | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors, transcription regulators Spenn-ch04 - View
Solanum pennellii Sopen01g048140 sequence-specific DNA binding transcription factors, transcription regulators | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors, transcription regulators Spenn-ch01 - View
Solanum pennellii Sopen12g029930 sequence-specific DNA binding transcription factors, transcription regulators | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors, transcription regulators Spenn-ch12 - View
Solanum tuberosum PGSC0003DMG400012901 Transcription factor ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400002044 Transcription factor ST4.03ch12 - View
Selenicereus undatus Hund16874 Scaffold_33675 - View
Selenicereus undatus Hund27005 Scaffold_2055 - View
Trochodendron aralioides TAR625G0049 group4 + View
Trochodendron aralioides TAR628G0401 group5 - View
Trochodendron aralioides TAR381G0451 group11 + View
Trochodendron aralioides TAR376G0504 group14 - View
Theobroma cacao Thecc.08G067700 Transcription factor Chromosome_8 - View
Theobroma cacao Thecc.02G132000 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104806804 transcription factor bHLH145 NW_010960187.1 - View
Tripterygium wilfordii TWI14G0408 NC_052249.1 + View
Tripterygium wilfordii TWI12G0724 NC_052243.1 - View
Tripterygium wilfordii TWI56G0398 NC_052242.1 + View
Vaccinium macrocarpon vmacro19953 Similar to BHLH143: Transcription factor bHLH143 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro21312 Protein of unknown function chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G1031 CM024075.1 - View
Vigna mungo VMungo1309G0268 CM024072.1 - View
Vigna mungo VMungo0647G2559 CM024073.1 + View