Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.2326 chr6 - View
Aquilegia oxysepala Aqoxy3G02906 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LIXN1K K01184 - polygalacturonase (E3.2.1.15) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G60590 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1)%3B Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6%3B Bacteria - 1298%3B Metazoa - 151%3B Fungi - 1295%3B Plants - 1596%3B Viruses - 3%3B Other Eukaryotes - 176 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g31224 ChrB07 - View
Beta vulgaris EL10Ac6g13695 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Chr6_EL10_PGA_scaffold0 - View
Corylus avellana Haze_14695 Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc11_g15290 Putative Polygalacturonase At1g48100 chr11 - View
Citrus clementina Ciclev10015111m.g scaffold_2 - View
Carpinus fangiana Cfa009168 Cfa03 - View
Carya illinoinensis CiPaw.03G040200 K01184 - polygalacturonase (E3.2.1.15) Chr03 - View
Citrullus lanatus ClCG10G014070 Pectin lyase-like superfamily protein LENGTH=540 CG_Chr10 + View
Cucumis melo MELO3C009970.2 polygalacturonase At1g48100 chr04 + View
Carica papaya Cpa.g.sc146.54 supercontig_146 + View
Chenopodium quinoa AUR62005397 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_1214 - View
Chenopodium quinoa AUR62014059 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_3035 - View
Daucus carota DCAR_007081 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_011235 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv35083 GWHABJS00000012 - View
Davidia involucrata Dinv15278 GWHABJS00000008 - View
Durio zibethinus Duzib147G1425 NW_019168470.1 - View
Erigeron canadensis ECA233G0031 Conyza_canadensis_scaffold:1 + View
Fragaria x ananassa FAN17G0975 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Fvb4-2 - View
Fragaria x ananassa FAN02G1976 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-4 - View
Fragaria x ananassa FAN09G0992 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-2 + View
Fragaria x ananassa FAN05G5021 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-3 + View
Fragaria vesca FvH4_6g50960 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6 - View
Lotus japonicus Lj2g0006798 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN chr2 - View
Lonicera japonica Lj7A594G55 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_4_183001 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Lsat_1_v8_lg_4 - View
Magnolia biondii MBI18_g25674_MAGBIO AED:0.10 Chr18 - View
Malus domestica MD09G1030100 Pectin lyase-like superfamily protein Chr09 + View
Malus domestica MD13G1094100 Pectin lyase-like superfamily protein Chr13 - View
Malus domestica MD17G1032000 Pectin lyase-like superfamily protein Chr17 + View
Manihot esculenta Manes.15G149400 Chromosome15 + View
Nelumbo nucifera Nn3g16838 chr3 + View
Nelumbo nucifera Nn4g22738 chr4 + View
Prunus persica Prupe.3G287200 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Pp03 - View
Prunus persica Prupe.1G247300 Pp01 - View
Papaver somniferum PSO017G0856 NC_039362.1 - View
Populus trichocarpa Potri.001G346800 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Chr01 - View
Populus trichocarpa Potri.010G042100 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Chr10 - View
Quercus lobata QL02p075820 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0172361 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim12G0115300 chr12 + View
Salix brachista Sabra10G0025300 GWHAAZH00000010 + View
Salix brachista Sabra16G0226400 GWHAAZH00000016 - View
Sechium edule Sed0013488 LG06 + View
Theobroma cacao Thecc.04G012200 Chromosome_4 - View
Vaccinium macrocarpon vmacro16230 Similar to At1g80170: Probable polygalacturonase At1g80170 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G0336 CM024077.1 + View
Vitis vinifera GSVIVG01032447001 chr14 + View