Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G19210 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1%2C RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 4 anthesis%2C LP.10 ten leaves visible%2C C globular stage%2C LP.02 two leaves visible%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1)%3B Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5592%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink). Chr1 - View
AT5G67190 DREB and EAR motif protein 2 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1%2C RAP2.9 and RAP2.10. DREB and EAR motif protein 2 (DEAR2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: sepal%2C male gametophyte%2C carpel%3B EXPRESSED DURING: 4 anthesis%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
AT2G23340 DREB and EAR motif protein 3 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1%2C RAP2.9 and RAP2.10. DREB and EAR motif protein 3 (DEAR3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2 10 (TAIR:AT4G36900.1)%3B Has 5516 Blast hits to 5457 proteins in 238 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 5509%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink). Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G14080 LG-6 - View
Acer truncatum Atru.chr3.280 chr3 + View
Acer truncatum Atru.chr13.731 chr13 - View
Actinidia chinensis Actinidia36471 Lachesis_group4 + View
Arabidopsis lyrata AL8G44150 scaffold_8 + View
Arabidopsis lyrata AL1G31790 scaffold_1 - View
Arabidopsis lyrata AL7G13660 scaffold_7 + View
Avicennia marina MSTRG.15378 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.3436 ScioBoG_102836_HRSCAF_103072 - View
Aquilegia oxysepala Aqoxy5G01181 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.47NS3A PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VJ8B3Q PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Brassica carinata BcaB03g12927 ChrB03 + View
Brassica carinata BcaNung02526 Contig886 - View
Brassica napus C01p01920 C01 + View
Brassica napus A01p01750 A01 + View
Brassica napus A03p64990 A03 - View
Brassica napus C07p62290 C07 - View
Brassica oleracea BolC7t46645H C7 - View
Brassica oleracea BolC1t00184H C1 + View
Brassica rapa BraA07t29403Z A07 + View
Brassica rapa BraA03t15558Z A03 - View
Brassica rapa BraA01t00167Z A01 + View
Beta vulgaris EL10Ac6g15715 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0028041 dehydration-responsive element-binding protein DREB3 [Solanum tuberosum] Chr2 + View
Capsicum annuum CAN.G370.34 PGAv.1.6.scaffold370 + View
Cannabis sativa CANSAT01G0832 NC_044373.1 - View
Cicer arietinum L. Ca_24750_v3 Ca_LG8_v3 + View
Cicer arietinum L. Ca_13278_v3 Ca_LG4_v3 + View
Coffea canephora Cc07_g06220 Ethylene-responsive transcription factor ERF008 chr7 - View
Citrus clementina Ciclev10002733m.g scaffold_5 + View
Citrus clementina Ciclev10026687m.g scaffold_7 - View
Cardamine hirsuta CARHR280440 Ethylene-responsive transcription factor Chr8 + View
Cardamine hirsuta CARHR245610 Ethylene-responsive transcription factor Chr7 - View
Cardamine hirsuta CARHR292970 Ethylene-responsive transcription factor NSCAFC.76 + View
Cardamine hirsuta CARHR019810 Ethylene-responsive transcription factor Chr1 - View
Carya illinoinensis CiPaw.15G053900 PTHR31729//PTHR31729:SF2 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1 Chr15 + View
Citrullus lanatus ClCG01G016940 Ethylene-responsive transcription factor CG_Chr01 - View
Citrullus lanatus ClCG02G012230 Ethylene-responsive transcription factor CG_Chr02 + View
Cucumis melo MELO3C020847.2 ethylene-responsive transcription factor ERF008 chr11 - View
Cucumis melo MELO3C007573.2 ethylene-responsive transcription factor ERF011 chr08 - View
Chenopodium quinoa AUR62001898 ERF010: Ethylene-responsive transcription factor ERF010 C_Quinoa_Scaffold_4480 + View
Chenopodium quinoa AUR62003913 ERF010: Ethylene-responsive transcription factor ERF010 C_Quinoa_Scaffold_2370 - View
Capsella rubella Carub.0001s1881 PTHR31985:SF19 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017 scaffold_1 - View
Capsella rubella Carub.0007s0308 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED scaffold_7 + View
Capsella rubella Carub.0008s2732 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_2G016380 ethylene-responsive transcription factor ERF008 chr2 + View
Cucumis sativus L. CsaV3_6G043400 ethylene-responsive transcription factor ERF011 chr6 - View
Daucus carota DCAR_008814 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv26847 GWHABJS00000014 - View
Durio zibethinus Duzib116G0415 NW_019167949.1 - View
Durio zibethinus Duzib264G0033 NW_019167960.1 + View
Durio zibethinus Duzib147G0692 NW_019168470.1 + View
Durio zibethinus Duzib187G0078 NW_019167860.1 + View
Erigeron canadensis ECA232G3873 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA246G4261 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA238G2463 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.I00891 Chr09 + View
Erythranthe guttata Migut.H00411 scaffold_8 + View
Eutrema salsugineum Thhalv10009812m.g PTHR31985:SF19 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017 scaffold_5 + View
Eutrema salsugineum Thhalv10000354m.g PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED scaffold_15 + View
Eutrema salsugineum Thhalv10026288m.g PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED scaffold_1 + View
Fragaria x ananassa FAN26G1443 PTHR31729//PTHR31729:SF0 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Fvb1-2 - View
Fragaria x ananassa FAN28G2125 PTHR31729//PTHR31729:SF0 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Fvb1-1 + View
Fragaria x ananassa FAN23G0702 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Fvb1-3 - View
Fragaria vesca FvH4_2g34020 PTHR31729//PTHR31729:SF2 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1 Fvb2 + View
Fragaria vesca FvH4_1g16370 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Fvb1 - View
Gossypium hirsutum Gohir.D05G207700 PTHR31729//PTHR31729:SF2 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1 D05 - View
Gossypium hirsutum Gohir.A12G073100 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED A12 - View
Gossypium hirsutum Gohir.D03G024500 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED D03 - View
Gossypium hirsutum Gohir.D12G070900 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED D12 + View
Gossypium hirsutum Gohir.A02G156100 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED A02 + View
Glycine max Glyma.14G084700 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Gm14 - View
Glycine max Glyma.17G169800 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Gm17 + View
Glycine max Glyma.11G053600 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Gm11 + View
Glycine max Glyma.01G188600 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Gm01 - View
Glycine max Glyma.04G041200 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Gm04 - View
Gossypium raimondii Gorai.010G021900 Chr10 + View
Gossypium raimondii Gorai.009G214300 Chr09 - View
Gossypium raimondii Gorai.003G026100 Chr03 - View
Gossypium raimondii Gorai.008G077900 Chr08 - View
Lupinus albus Lalb_Chr16g0378631 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Lalb_Chr16 - View
Lupinus albus Lalb_Chr05g0213381 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Lalb_Chr05 - View
Lupinus albus Lalb_Chr09g0323311 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Lalb_Chr09 - View
Lupinus albus Lalb_Chr22g0355021 PTHR31729//PTHR31729:SF0 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Lalb_Chr22 + View
Lotus japonicus Lj2g0018149 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED chr2 + View
Lotus japonicus Lj1g0016709 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED chr1 + View
Lotus japonicus Lj4g0017761 PTHR31729//PTHR31729:SF0 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED chr4 - View
Lonicera japonica Lj7C74T8 GWHAAZE00000007 - View
Lonicera japonica Lj4P154T9 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_3_89921 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_2_85720 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_4_164580 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Lsat_1_v8_lg_4 + View
Malus domestica MD02G1176200 DREB and EAR motif protein 2 Chr02 - View
Malus domestica MD15G1286600 DREB and EAR motif protein 3 Chr15 - View
Manihot esculenta Manes.13G120400 Chromosome13 + View
Medicago truncatula Medtr5g016750 ethylene response factor chr5 + View
Punica granatum PGR102G0605 NC_045129.1 + View
Papaver somniferum PSO210G5371 NC_039359.1 - View
Populus trichocarpa Potri.005G140900 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Chr05 - View
Phaseolus vulgaris Phvul.003G241700 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Chr03 + View
Phaseolus vulgaris Phvul.002G016700 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED Chr02 + View
Quercus lobata QL02p004228 CM012294 + View
Quercus lobata QL06p040548 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0308371 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr2g0106241 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0053100 chr06 - View
Rhododendron simsii Rhsim08G0098900 chr08 + View
Rhododendron simsii Rhsim10G0113900 chr10 + View
Rhododendron simsii Rhsim07G0226000 chr07 + View
Striga asiatica SGA_v2.0_scaffold15G07342 scaffold15 - View
Salvia bowleyana SalBow5G5367 GWHASIU00000003 + View
Salix brachista Sabra05G0110400 GWHAAZH00000005 + View
Salix brachista Sabra07G0041500 GWHAAZH00000007 - View
Sechium edule Sed0022243 LG10 - View
Sechium edule Sed0002958 LG14 - View
Solanum lycopersicum Solyc04g078640.3 Ethylene-responsive transcription factor RAP2-1 (AHRD V3.3 *** A0A1U8GBU2_CAPAN) SL4.0ch04 + View
Solanum lycopersicum Solyc02g093130.3 Ethylene-responsive transcription factor RAP2-10 (AHRD V3.3 *** A0A2G2XHS4_CAPBA) SL4.0ch02 + View
Schrenkiella parvula Sp4g02330 PTHR31729//PTHR31729:SF0 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED ch4-2 + View
Schrenkiella parvula Sp7g34870 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED ch7-6 - View
Schrenkiella parvula Sp1g17110 PTHR31985//PTHR31985:SF19 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017 ch1-1 - View
Schrenkiella parvula Sp5g30070 PTHR31985//PTHR31985:SF34 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 ch5-7 + View
Schrenkiella parvula Sp2g29480 PTHR31729:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF008-RELATED ch2-4 + View
Solanum pennellii Sopen02g037700 Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. | cooperatively regulated by ethylene and jasmonate 1 (CEJ1) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 Spenn-ch02 + View
Solanum pennellii Sopen04g032240 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. | DREB and EAR motif protein 2 (DEAR2) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: sepal, male gametophyte, carpel | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400004005 Drought responsive element binding protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400007951 DRE binding protein 1 ST4.03ch04 + View
Trochodendron aralioides TAR625G0445 group4 - View
Trochodendron aralioides TAR628G1625 group5 + View
Trochodendron aralioides TAR381G1482 group11 - View
Theobroma cacao Thecc.01G060800 DREB and EAR motif protein 2 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807596 ethylene-responsive transcription factor RAP2-10-like NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104819854 ethylene-responsive transcription factor RAP2-10-like NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104827294 ethylene-responsive transcription factor ERF010 NW_010960188.1 - View
Trifolium pratense TPR.G26859 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI73G0851 NC_052232.1 + View
Tripterygium wilfordii TWI56G0810 NC_052242.1 + View
Tripterygium wilfordii TWI09G0950 NC_052245.1 - View
Vigna mungo VMungo0647G0717 CM024073.1 + View
Vitis vinifera GSVIVG01022076001 chr7 + View