Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G57130 Clp amino terminal domain-containing protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101%2C a ClpB chaperonin required for thermotolerance. Clp amino terminal domain-containing protein%3B INVOLVED IN: protein metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Clp%2C N-terminal (InterPro:IPR004176)%3B BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G29920.1)%3B Has 283 Blast hits to 240 proteins in 33 species: Archae - 2%3B Bacteria - 10%3B Metazoa - 3%3B Fungi - 0%3B Plants - 262%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink). Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G20630 LG-2 + View
Acer truncatum Atru.chr7.939 chr7 - View
Arabidopsis lyrata AL8G33060 scaffold_8 + View
Arabidopsis lyrata AL7G22320 scaffold_7 + View
Avicennia marina MSTRG.19366 ScioBoG_25048_HRSCAF_25167 - View
Aquilegia oxysepala Aqoxy7G02882 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M4LRUB PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WDF2TS PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.11 + View
Brassica carinata BcaC01g01202 ChrC01 - View
Brassica carinata BcaC04g20006 ChrC04 - View
Brassica carinata BcaC09g51774 ChrC09 - View
Brassica carinata BcaB03g12625 ChrB03 - View
Brassica carinata BcaB05g22323 ChrB05 + View
Brassica napus C09p48900 C09 + View
Brassica napus C01p09160 C01 + View
Brassica napus A08p19500 A08 + View
Brassica napus C02p14540 C02 - View
Brassica napus A01p08200 A01 + View
Brassica napus C03p89020 C03 + View
Brassica napus A10p14480 A10 + View
Brassica oleracea BolC2t07578H C2 - View
Brassica oleracea BolC3t21212H C3 + View
Brassica oleracea BolC1t00907H C1 + View
Brassica oleracea BolC9t57739H C9 + View
Brassica rapa BraA01t00766Z A01 + View
Brassica rapa BraA10t43538Z A10 + View
Brassica rapa BraA08t33911Z A08 + View
Camellia sinensis var. sinensis CSS0001018 hypothetical protein VITISV_000145 [Vitis vinifera] Chr2 + View
Cicer arietinum L. Ca_02120_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_21258_v3 Ca_LG7_v3 + View
Corylus avellana Haze_22040 Similar to SMXL4: Protein SMAX1-LIKE 4 (Arabidopsis thaliana OX%3D3702) 3 + View
Citrus clementina Ciclev10007337m.g scaffold_1 - View
Cardamine hirsuta CARHR270910 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Chr8 + View
Cardamine hirsuta CARHR237840 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Chr7 - View
Carya illinoinensis CiPaw.08G032000 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Chr08 - View
Carya illinoinensis CiPaw.07G198200 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Chr07 + View
Citrullus lanatus ClCG06G013680 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein LENGTH=1017 CG_Chr06 + View
Citrullus lanatus ClCG11G011650 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein LENGTH=990 CG_Chr11 + View
Cucumis melo MELO3C017420.2 protein SMAX1-LIKE 4-like chr02 + View
Carica papaya Cpa.g.sc115.68 supercontig_115 - View
Capsella rubella Carub.0007s1072 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN scaffold_7 + View
Capsella rubella Carub.0008s1764 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN scaffold_8 + View
Cucumis sativus L. CsaV3_1G031950 protein SMAX1-LIKE 4-like chr1 + View
Cucumis sativus L. CsaV3_2G008820 LOW QUALITY PROTEIN: protein SMAX1-LIKE 4-like chr2 - View
Davidia involucrata Dinv41189 GWHABJS00000013 + View
Durio zibethinus Duzib168G2367 NW_019168159.1 - View
Durio zibethinus Duzib150G1101 NW_019167882.1 + View
Erigeron canadensis ECA234G0877 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.C00101 Chr03 - View
Erythranthe guttata Migut.J00789 scaffold_10 - View
Erythranthe guttata Migut.L01876 scaffold_12 - View
Eutrema salsugineum Thhalv10024298m.g PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN scaffold_1 + View
Eutrema salsugineum Thhalv10012549m.g PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN scaffold_2 - View
Fragaria x ananassa FAN07G2076 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Fvb4-4 + View
Fragaria x ananassa FAN22G2359 PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Fvb4-1 - View
Fragaria vesca FvH4_4g07050 PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Fvb4 - View
Glycine max Glyma.13G101300 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Gm13 + View
Glycine max Glyma.15G167000 PTHR11638:SF124 - DOUBLE CLP-N MOTIF PROTEIN Gm15 + View
Glycine max Glyma.17G058400 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Gm17 - View
Glycine max Glyma.09G060500 PTHR11638:SF124 - DOUBLE CLP-N MOTIF PROTEIN Gm09 + View
Helianthus annuus HanXRQChr12g0358481 Putative clp, N-terminal; P-loop containing nucleoside triphosphate hydrolase HanXRQChr12 - View
Helianthus annuus HanXRQChr10g0308871 Probable clp amino terminal domain-containing protein HanXRQChr10 + View
Lupinus albus Lalb_Chr12g0199651 PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Lalb_Chr12 + View
Lupinus albus Lalb_Chr07g0180691 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Lalb_Chr07 + View
Lupinus albus Lalb_Chr13g0299891 PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Lalb_Chr13 - View
Lotus japonicus Lj6g0006401 PTHR11638//PTHR11638:SF124 - ATP-DEPENDENT CLP PROTEASE // DOUBLE CLP-N MOTIF PROTEIN chr6 - View
Lactuca sativa Lsat_1_v5_gn_5_83241 PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Lsat_1_v8_lg_5 + View
Malus domestica MD16G1247100 Clp amino terminal domain-containing protein Chr16 - View
Manihot esculenta Manes.06G018300 Chromosome06 - View
Medicago truncatula Medtr2g038200 heat shock-like protein, putative chr2 + View
Medicago truncatula Medtr4g127290 heat shock-like protein chr4 - View
Olea europaea Oeu020575.1 chr11 + View
Punica granatum PGR142G0257 NC_045128.1 - View
Prunus persica Prupe.1G073700 PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Pp01 - View
Papaver somniferum PSO170G5277 NC_039360.1 - View
Populus trichocarpa Potri.006G073800 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Chr06 - View
Populus trichocarpa Potri.018G140900 PTHR11638//PTHR11638:SF123 - ATP-DEPENDENT CLP PROTEASE // CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Chr18 - View
Phaseolus vulgaris Phvul.003G140726 Chr03 + View
Phaseolus vulgaris Phvul.009G235300 PTHR11638:SF124 - DOUBLE CLP-N MOTIF PROTEIN Chr09 - View
Rhododendron simsii Rhsim03G0267500 chr03 + View
Salix brachista Sabra06G0055000 GWHAAZH00000006 - View
Salix brachista Sabra18G0115100 GWHAAZH00000018 - View
Sechium edule Sed0021866 LG12 - View
Sechium edule Sed0008059 LG11 - View
Sechium edule Sed0027649 LG08 - View
Schrenkiella parvula Sp7g27730 PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN ch7-5 - View
Trochodendron aralioides TAR383G0266 group10 + View
Trochodendron aralioides TAR626G1540 group3 + View
Theobroma cacao Thecc.09G187800 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104803930 LOW QUALITY PROTEIN: protein SMAX1-LIKE 2-like NW_010971389.1 - View
Tarenaya hassleriana THA.LOC104814648 protein SMAX1-LIKE 4 isoform X1 NW_010965451.1 - View
Trifolium pratense TPR.G5385 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI34G0712 NC_052235.1 + View
Vaccinium macrocarpon vmacro05991 Similar to SMXL4: Protein SMAX1-LIKE 4 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2189 CM024074.1 + View
Vigna mungo VMungo1309G2517 CM024072.1 + View
Vitis vinifera GSVIVG01029304001 chr11 + View