Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G11490 zinc finger (C2H2 type) family protein zinc finger (C2H2 type) family protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B LOCATED IN: intracellular%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1)%3B Has 263 Blast hits to 257 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 33%3B Plants - 228%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr1 - View
AT5G54630 zinc finger protein-like protein zinc finger protein-related%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G27240.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G10560 LG-3 - View
Aethionema arabicum Aa31LG5G10220 LG-5 - View
Acer truncatum Atru.chr2.3145 chr2 - View
Actinidia chinensis Actinidia05136 Lachesis_group19 + View
Actinidia chinensis Actinidia09951 Lachesis_group5 - View
Actinidia chinensis Actinidia05543 Lachesis_group20 + View
Arabidopsis lyrata AL7G25580 scaffold_7 - View
Arabidopsis lyrata AL1G22600 scaffold_1 - View
Arabidopsis lyrata AL8G30080 scaffold_8 - View
Avicennia marina MSTRG.12949 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.15954 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.14407 ScioBoG_18782_HRSCAF_18867 - View
Avicennia marina MSTRG.15172 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.06g183140 AmaHy_arrow1_Scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B4LZ3P arahy.Tifrunner.gnm1.Arahy.08 + View
Brassica carinata BcaB05g22151 ChrB05 - View
Brassica carinata BcaC03g14299 ChrC03 + View
Brassica carinata BcaC09g50595 ChrC09 - View
Brassica carinata BcaNung03051 Contig1030 - View
Brassica napus A01p18440 A01 + View
Brassica napus C02p16830 C02 + View
Brassica napus A02p10130 A02 + View
Brassica napus C09p44980 C09 - View
Brassica napus C01p23380 C01 + View
Brassica oleracea BolC1t02279H C1 + View
Brassica oleracea BolC9t57375H C9 - View
Brassica oleracea BolC2t07785H C2 + View
Brassica rapa BraA01t01792Z A01 + View
Brassica rapa BraA02t06084Z A02 + View
Camellia sinensis var. sinensis CSS0040105 PREDICTED: uncharacterized protein LOC104604941 [Nelumbo nucifera] Chr7 - View
Capsicum annuum CAN.G162.141 PGAv.1.6.scaffold162 - View
Capsicum annuum CAN.G424.99 PGAv.1.6.scaffold424 - View
Cannabis sativa CANSAT56G1395 NC_044371.1 - View
Corylus avellana Haze_09587 Protein of unknown function 4 - View
Coffea canephora Cc05_g13120 zinc finger protein-related chr5 - View
Citrus clementina Ciclev10008310m.g scaffold_1 - View
Ceratophyllum demersum CDE01G0601 11 - View
Ceratophyllum demersum CDE05G3458 3 + View
Ceratophyllum demersum CDE11G0516 9 + View
Carpinus fangiana Cfa020457 Cfa08 + View
Cardamine hirsuta CARHR011760 C2H2 zinc finger protein Chr1 - View
Cardamine hirsuta CARHR267940 C2H2 zinc finger protein Chr8 - View
Cardamine hirsuta CARHR234880 C2H2 zinc finger protein Chr7 + View
Carya illinoinensis CiPaw.11G182400 Chr11 - View
Carya illinoinensis CiPaw.12G125500 Chr12 - View
Citrullus lanatus ClCG05G014890 C2H2 zinc finger protein CG_Chr05 + View
Cucumis melo MELO3C007349.2 Zinc finger, C2H2 chr08 - View
Carica papaya Cpa.g.sc97.89 supercontig_97 + View
Chenopodium quinoa AUR62029243 Protein of unknown function C_Quinoa_Scaffold_2939 + View
Capsella rubella Carub.0007s1363 scaffold_7 - View
Capsella rubella Carub.0008s1489 scaffold_8 - View
Capsella rubella Carub.0001s1110 scaffold_1 - View
Cucumis sativus L. CsaV3_6G049450 Zinc finger, C2H2 protein chr6 + View
Daucus carota DCAR_010012 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv22318 GWHABJS00000001 - View
Davidia involucrata Dinv03949 GWHABJS00000013 + View
Davidia involucrata Dinv18949 GWHABJS00000020 - View
Durio zibethinus Duzib160G0106 NW_019168015.1 - View
Durio zibethinus Duzib213G0363 NW_019167993.1 + View
Durio zibethinus Duzib170G0990 NW_019167871.1 + View
Erigeron canadensis ECA246G2346 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA240G0222 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.F03418 Chr06 - View
Erythranthe guttata Migut.H01868 scaffold_8 + View
Erythranthe guttata Migut.M01820 scaffold_13 + View
Erythranthe guttata Migut.M01260 scaffold_13 - View
Eutrema salsugineum Thhalv10013387m.g scaffold_2 + View
Eutrema salsugineum Thhalv10025260m.g scaffold_1 - View
Fragaria x ananassa FAN16G2939 Fvb3-3 - View
Fragaria x ananassa FAN11G3372 Fvb3-4 + View
Fragaria x ananassa FAN21G2737 Fvb3-2 - View
Fragaria vesca FvH4_3g21630 Fvb3 - View
Gossypium hirsutum Gohir.A01G073400 A01 - View
Gossypium hirsutum Gohir.D01G060000 D01 - View
Glycine max Glyma.12G215700 Gm12 + View
Glycine max Glyma.15G063600 Gm15 + View
Glycine max Glyma.13G285800 Gm13 - View
Glycine max Glyma.06G265800 Gm06 - View
Glycine max Glyma.13G250800 Gm13 - View
Glycine max Glyma.12G136900 Gm12 + View
Gossypium raimondii Gorai.002G081400 Chr02 - View
Helianthus annuus HanXRQChr03g0076251 Probable zinc finger protein-related HanXRQChr03 - View
Helianthus annuus HanXRQChr13g0407591 Putative zinc finger, C2H2; Poly(ADP-ribose) polymerase, catalytic domain HanXRQChr13 - View
Lupinus albus Lalb_Chr20g0122621 Lalb_Chr20 - View
Lupinus albus Lalb_Chr19g0134681 Lalb_Chr19 - View
Lotus japonicus Lj6g0011235 chr6 - View
Lonicera japonica Lj1A862T74 GWHAAZE00000001 - View
Lonicera japonica Lj8C165T6 GWHAAZE00000008 - View
Lonicera japonica Lj1A1221T59 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_95041 Lsat_1_v8_lg_9 + View
Malus domestica MD11G1229000 zinc finger protein-related Chr11 + View
Malus domestica MD03G1214000 zinc finger protein-related Chr03 + View
Manihot esculenta Manes.03G121500 Chromosome03 - View
Manihot esculenta Manes.15G077900 Chromosome15 + View
Medicago truncatula Medtr2g010860 C2H2-like zinc finger protein chr2 + View
Punica granatum PGR031G2281 NC_045127.1 + View
Punica granatum PGR004G0638 NC_045131.1 - View
Papaver somniferum PSO210G0474 NC_039359.1 + View
Papaver somniferum PSO832G1659 NC_039367.1 - View
Populus trichocarpa Potri.004G030800 Chr04 - View
Populus trichocarpa Potri.001G415600 Chr01 - View
Populus trichocarpa Potri.011G131300 Chr11 - View
Phaseolus vulgaris Phvul.006G196000 Chr06 - View
Phaseolus vulgaris Phvul.011G142000 Chr11 + View
Rhododendron simsii Rhsim06G0187900 chr06 + View
Rhododendron simsii Rhsim04G0014900 chr04 - View
Striga asiatica SGA_v2.0_scaffold9G05016 scaffold9 - View
Salix brachista Sabra11G0118400 GWHAAZH00000011 - View
Salix brachista Sabra16G0282200 GWHAAZH00000016 - View
Salix brachista Sabra04G0017500 GWHAAZH00000004 - View
Simmondsia chinensis Sc03g0009190 GWHAASQ00000003 - View
Sechium edule Sed0007436 LG13 - View
Sechium edule Sed0001219 LG04 - View
Solanum lycopersicum Solyc02g079920.3 Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1PE02_ARTAN) SL4.0ch02 - View
Solanum lycopersicum Solyc07g063970.3 C2H2 zinc finger protein (AHRD V3.3 *** A0A2K3NT14_TRIPR) SL4.0ch07 - View
Schrenkiella parvula Sp7g25160 ch7-4 + View
Schrenkiella parvula Sp6g16590 ch6-6 - View
Solanum pennellii Sopen07g032110 zinc finger protein-related | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein Spenn-ch07 - View
Solanum pennellii Sopen02g024670 zinc finger protein-related | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400021725 Transcription factor ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400019231 Gene of unknown function ST4.03ch07 - View
Selenicereus undatus Hund23323 Scaffold_33680 + View
Selenicereus undatus Hund02147 Scaffold_33678 + View
Theobroma cacao Thecc.07G055900 Transcription factor Chromosome_7 + View
Tarenaya hassleriana THA.LOC104799891 uncharacterized protein LOC104799891 NW_010968712.1 + View
Tripterygium wilfordii TWI38G0631 NC_052252.1 - View
Tripterygium wilfordii TWI38G0760 NC_052252.1 - View
Tripterygium wilfordii TWI39G0205 NC_052250.1 + View
Vaccinium macrocarpon vmacro11777 Protein of unknown function chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vanilla planifolia HPP92_012378 C2H2 zinc finger protein *** CM028154.1 - View
Vitis vinifera GSVIVG01014576001 chr19 - View