Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G01453 late embryogenesis abundant hydroxyproline-rich glycoprotein family protein unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
AT2G46300 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1)%3B Has 504 Blast hits to 503 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 2%3B Plants - 501%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G850 LG-5 + View
Aethionema arabicum Aa31LG1G27670 LG-1 + View
Aethionema arabicum Aa31LG1G10830 LG-1 + View
Acer truncatum Atru.chr5.616 chr5 + View
Actinidia chinensis Actinidia10100 Lachesis_group0 - View
Actinidia chinensis Actinidia20192 Lachesis_group6 + View
Arabidopsis lyrata AL4G45600 scaffold_4 + View
Arabidopsis lyrata AL1G10980 scaffold_1 + View
Arabidopsis lyrata AL6G52250 scaffold_6 + View
Brassica carinata BcaC01g06846 ChrC01 - View
Brassica carinata BcaB03g13583 ChrB03 - View
Brassica carinata BcaB01g02336 ChrB01 + View
Brassica napus A02p24280 A02 + View
Brassica napus C03p38880 C03 - View
Brassica napus A05p01500 A05 - View
Brassica napus C02p38280 C02 + View
Brassica napus A10p00520 A10 + View
Brassica napus C05p00550 C05 + View
Brassica napus A03p31890 A03 - View
Brassica napus C04p01700 C04 - View
Brassica oleracea BolC2t09843H C2 + View
Brassica oleracea BolC5t28844H C5 + View
Brassica oleracea BolC4t21822H C4 - View
Brassica oleracea BolC3t16162H C3 - View
Brassica rapa BraA10t42331Z A10 + View
Brassica rapa BraA03t12361Z A03 - View
Brassica rapa BraA05t19146Z A05 - View
Brassica rapa BraA02t07418Z A02 + View
Camellia sinensis var. sinensis CSS0038689 PREDICTED: uncharacterized protein LOC104593414 [Nelumbo nucifera] Chr6 - View
Cicer arietinum L. Ca_09491_v3 Ca_LG3_v3 + View
Corylus avellana Haze_15614 Similar to NHL2: NDR1/HIN1-like protein 2 (Arabidopsis thaliana OX%3D3702) 11 + View
Citrus clementina Ciclev10021837m.g scaffold_3 - View
Cardamine hirsuta CARHR000970 unknown protein Chr1 + View
Cardamine hirsuta CARHR249180 unknown protein Chr8 + View
Carya illinoinensis CiPaw.02G038200 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr02 + View
Cucumis melo MELO3C006056.2 Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative chr06 + View
Chenopodium quinoa AUR62023503 Protein of unknown function C_Quinoa_Scaffold_1606 - View
Chenopodium quinoa AUR62004447 Protein of unknown function C_Quinoa_Scaffold_4250 + View
Capsella rubella Carub.0006s3617 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_6 - View
Capsella rubella Carub.0001s0080 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_1 + View
Capsella rubella Carub.0004s2900 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_4 + View
Davidia involucrata Dinv32550 GWHABJS00000020 + View
Davidia involucrata Dinv43890 GWHABJS00000016 + View
Durio zibethinus Duzib138G0021 NW_019167893.1 - View
Durio zibethinus Duzib133G0451 NW_019167938.1 - View
Eutrema salsugineum Thhalv10001596m.g PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_22 + View
Eutrema salsugineum Thhalv10009686m.g PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_5 - View
Eutrema salsugineum Thhalv10028895m.g PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_3 + View
Fragaria x ananassa FAN03G0560 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Fvb7-3 - View
Fragaria x ananassa FAN01G2778 Fvb7-4 - View
Fragaria x ananassa FAN06G0749 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Fvb7-2 + View
Fragaria x ananassa FAN06G4203 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Fvb7-2 + View
Fragaria x ananassa FAN10G2759 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Fvb7-1 + View
Fragaria x ananassa FAN10G1950 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Fvb7-1 + View
Fragaria vesca FvH4_7g15840 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Fvb7 + View
Gossypium hirsutum Gohir.D08G147400 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN D08 + View
Gossypium hirsutum Gohir.A08G126100 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN A08 + View
Gossypium hirsutum Gohir.A12G110633 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN A12 - View
Gossypium hirsutum Gohir.D11G099200 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN D11 - View
Gossypium hirsutum Gohir.A11G094200 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN A11 - View
Glycine max Glyma.03G255300 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Gm03 + View
Gossypium raimondii Gorai.004G153000 Chr04 + View
Gossypium raimondii Gorai.008G123300 Chr08 - View
Gossypium raimondii Gorai.007G105400 Chr07 - View
Hydrangea macrophylla Hma1.2p1_0384F.1_g141000 Hma1.2p1_0384F.1 + View
Lupinus albus Lalb_Chr04g0261721 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Lalb_Chr04 + View
Lotus japonicus Lj1g0025938 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN chr1 - View
Lonicera japonica Lj7A504T56 GWHAAZE00000007 - View
Magnolia biondii MBI06_g02230_MAGBIO AED:0.00 Chr06 - View
Malus domestica MD07G1144100 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr07 + View
Malus domestica MD01G1075000 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr01 + View
Manihot esculenta Manes.05G026400 Chromosome05 - View
Nelumbo nucifera Nn1g01788 chr1 + View
Nelumbo nucifera Nn7g37376 chr7 + View
Petunia axillaris Peaxi162Scf00403g00074 Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative Peaxi162Scf00403 - View
Punica granatum PGR042G2135 NC_045130.1 - View
Prunus persica Prupe.2G183000 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Pp02 + View
Pisum sativum Psat3g003480 Unknown gene chr3LG5 - View
Populus trichocarpa Potri.014G094400 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr14 + View
Populus trichocarpa Potri.002G167300 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr02 + View
Phaseolus vulgaris Phvul.006G110000 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr06 + View
Quercus lobata QL04p059571 4 - View
Rosa chinensis RcHm_v2.0_Chr1g0358651 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim07G0007300 chr07 - View
Striga asiatica SGA_v2.0_scaffold11G05717 scaffold11 + View
Salvia bowleyana SalBow5G4166 GWHASIU00000003 + View
Salix brachista Sabra14G0069000 GWHAAZH00000014 + View
Salix brachista Sabra02G0144400 GWHAAZH00000002 - View
Simmondsia chinensis Sc01g0002990 GWHAASQ00000001 - View
Solanum lycopersicum Solyc10g011750.3 Late embryogenesis abundant hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** Q5XV90_ARATH) SL4.0ch10 - View
Schrenkiella parvula Sp6g01000 PTHR31234//PTHR31234:SF12 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN ch6-1 + View
Schrenkiella parvula Sp1g00860 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN ch1-1 + View
Schrenkiella parvula Sp4g28340 PTHR31234:SF12 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN ch4-6 + View
Solanum pennellii Sopen10g005540 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch10 - View
Trochodendron aralioides TAR375G0073 group15 + View
Theobroma cacao Thecc.01G348100 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104825868 uncharacterized protein LOC104825868 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104817334 uncharacterized protein LOC104817334 NW_010965946.1 + View
Tarenaya hassleriana THA.LOC104802056 uncharacterized protein LOC104802056 NW_010970490.1 + View
Trifolium pratense TPR.G4707 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI14G0215 NC_052249.1 + View
Vaccinium macrocarpon vmacro13200 Similar to NHL10: NDR1/HIN1-like protein 10 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G0638 CM024075.1 - View